BLASTX nr result
ID: Cephaelis21_contig00003410
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00003410 (1086 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana... 112 1e-22 ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu... 112 1e-22 ref|XP_002890790.1| ribosomal protein L34 family protein [Arabid... 112 2e-22 ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro... 112 2e-22 gb|AFK45087.1| unknown [Lotus japonicus] 110 8e-22 >ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana] gi|75311421|sp|Q9LP37.1|RK34_ARATH RecName: Full=50S ribosomal protein L34, chloroplastic; AltName: Full=CL34; Flags: Precursor gi|9502428|gb|AAF88127.1|AC021043_20 Putative ribosomal protein L34 [Arabidopsis thaliana] gi|17380840|gb|AAL36232.1| putative plastid ribosomal protein L34 precursor [Arabidopsis thaliana] gi|20259639|gb|AAM14176.1| putative plastid ribosomal protein L34 precursor [Arabidopsis thaliana] gi|21536900|gb|AAM61232.1| plastid ribosomal protein L34 precursor, putative [Arabidopsis thaliana] gi|332192918|gb|AEE31039.1| 50S ribosomal protein L34 [Arabidopsis thaliana] Length = 157 Score = 112 bits (281), Expect = 1e-22 Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = -3 Query: 742 TSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKT-VKRRGLVVQAKKYLL 566 +S+ S LLHC G+ + ++SS + +RRGLVV+A K L Sbjct: 48 SSASSQLLHCSFLSSPVSLASPFS----GLSIAFDLSSQTSGLNGQRRRGLVVRAGKAAL 103 Query: 565 CQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410 CQTKR+RSRKSLARTHGFR+RM TTSGRA IKRRR+KGRW+LCPK+N SSGK Sbjct: 104 CQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGK 155 >ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus communis] gi|223538249|gb|EEF39858.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus communis] Length = 161 Score = 112 bits (281), Expect = 1e-22 Identities = 64/119 (53%), Positives = 81/119 (68%) Frame = -3 Query: 760 NMVAKATSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKRRGLVVQA 581 N+++ +TS SGLLHC G+ LGL+++S+ + + GLVV+A Sbjct: 47 NVISNSTSR-SGLLHCSFLSTSSLSLSSSFS---GLSLGLDLNSSTGVRKGRGYGLVVRA 102 Query: 580 KKYLLCQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGKTS 404 K LCQTKRNRSRKSLARTHGFR+RM TTSGRAV+KRRR+KGR LC K+N +SGK S Sbjct: 103 GKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRKVLCTKSNPNSGKGS 161 >ref|XP_002890790.1| ribosomal protein L34 family protein [Arabidopsis lyrata subsp. lyrata] gi|297336632|gb|EFH67049.1| ribosomal protein L34 family protein [Arabidopsis lyrata subsp. lyrata] Length = 159 Score = 112 bits (280), Expect = 2e-22 Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = -3 Query: 742 TSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKR-RGLVVQAKKYLL 566 +S+ S LLHC G+ + ++SS + +R RGLVV+A K L Sbjct: 50 SSASSQLLHCSFLSSPLSLASPFS----GLSIAFDLSSQTSGLNSQRHRGLVVRAGKAAL 105 Query: 565 CQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410 CQTKR+RSRKSLARTHGFR+RM TTSGRA IKRRR+KGRW+LCPK+N SSGK Sbjct: 106 CQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGK 157 >ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis sativus] Length = 155 Score = 112 bits (279), Expect = 2e-22 Identities = 64/110 (58%), Positives = 73/110 (66%) Frame = -3 Query: 739 SSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKRRGLVVQAKKYLLCQ 560 S+ SGLLHC G+ LGL+ SS K RGLVV+A K LCQ Sbjct: 47 SARSGLLHCSFLPSSSLSCSSSFS---GLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQ 103 Query: 559 TKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410 TKRNRSRKSLARTHGFR+RM TT+GRAV+KRRR+KGR LC K+N SSGK Sbjct: 104 TKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK 153 >gb|AFK45087.1| unknown [Lotus japonicus] Length = 146 Score = 110 bits (274), Expect = 8e-22 Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 1/84 (1%) Frame = -3 Query: 658 GVLLGLEMSSNCAEKTVKRRGLVVQA-KKYLLCQTKRNRSRKSLARTHGFRKRMSTTSGR 482 G+ LGL++ SN KRRGLVV+A KK+ LCQTKRNRSRKSLARTHGFR+RM TT GR Sbjct: 63 GLSLGLDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGR 122 Query: 481 AVIKRRRSKGRWDLCPKTNHSSGK 410 A+++RRR+KGR LC KT+ +SGK Sbjct: 123 AILRRRRAKGRKVLCTKTHPNSGK 146