BLASTX nr result

ID: Cephaelis21_contig00003410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003410
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana...   112   1e-22
ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu...   112   1e-22
ref|XP_002890790.1| ribosomal protein L34 family protein [Arabid...   112   2e-22
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...   112   2e-22
gb|AFK45087.1| unknown [Lotus japonicus]                              110   8e-22

>ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana]
           gi|75311421|sp|Q9LP37.1|RK34_ARATH RecName: Full=50S
           ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor
           gi|9502428|gb|AAF88127.1|AC021043_20 Putative ribosomal
           protein L34 [Arabidopsis thaliana]
           gi|17380840|gb|AAL36232.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|20259639|gb|AAM14176.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|21536900|gb|AAM61232.1| plastid ribosomal protein L34
           precursor, putative [Arabidopsis thaliana]
           gi|332192918|gb|AEE31039.1| 50S ribosomal protein L34
           [Arabidopsis thaliana]
          Length = 157

 Score =  112 bits (281), Expect = 1e-22
 Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -3

Query: 742 TSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKT-VKRRGLVVQAKKYLL 566
           +S+ S LLHC                  G+ +  ++SS  +     +RRGLVV+A K  L
Sbjct: 48  SSASSQLLHCSFLSSPVSLASPFS----GLSIAFDLSSQTSGLNGQRRRGLVVRAGKAAL 103

Query: 565 CQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410
           CQTKR+RSRKSLARTHGFR+RM TTSGRA IKRRR+KGRW+LCPK+N SSGK
Sbjct: 104 CQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGK 155


>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
           communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
           protein L34, chloroplast precursor, putative [Ricinus
           communis]
          Length = 161

 Score =  112 bits (281), Expect = 1e-22
 Identities = 64/119 (53%), Positives = 81/119 (68%)
 Frame = -3

Query: 760 NMVAKATSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKRRGLVVQA 581
           N+++ +TS  SGLLHC                  G+ LGL+++S+   +  +  GLVV+A
Sbjct: 47  NVISNSTSR-SGLLHCSFLSTSSLSLSSSFS---GLSLGLDLNSSTGVRKGRGYGLVVRA 102

Query: 580 KKYLLCQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGKTS 404
            K  LCQTKRNRSRKSLARTHGFR+RM TTSGRAV+KRRR+KGR  LC K+N +SGK S
Sbjct: 103 GKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRKVLCTKSNPNSGKGS 161


>ref|XP_002890790.1| ribosomal protein L34 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336632|gb|EFH67049.1| ribosomal protein
           L34 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  112 bits (280), Expect = 2e-22
 Identities = 62/112 (55%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -3

Query: 742 TSSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKR-RGLVVQAKKYLL 566
           +S+ S LLHC                  G+ +  ++SS  +    +R RGLVV+A K  L
Sbjct: 50  SSASSQLLHCSFLSSPLSLASPFS----GLSIAFDLSSQTSGLNSQRHRGLVVRAGKAAL 105

Query: 565 CQTKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410
           CQTKR+RSRKSLARTHGFR+RM TTSGRA IKRRR+KGRW+LCPK+N SSGK
Sbjct: 106 CQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGK 157


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score =  112 bits (279), Expect = 2e-22
 Identities = 64/110 (58%), Positives = 73/110 (66%)
 Frame = -3

Query: 739 SSPSGLLHCXXXXXXXXXXXXXXXXXSGVLLGLEMSSNCAEKTVKRRGLVVQAKKYLLCQ 560
           S+ SGLLHC                  G+ LGL+ SS       K RGLVV+A K  LCQ
Sbjct: 47  SARSGLLHCSFLPSSSLSCSSSFS---GLSLGLDWSSKVGVGQGKGRGLVVRAGKAALCQ 103

Query: 559 TKRNRSRKSLARTHGFRKRMSTTSGRAVIKRRRSKGRWDLCPKTNHSSGK 410
           TKRNRSRKSLARTHGFR+RM TT+GRAV+KRRR+KGR  LC K+N SSGK
Sbjct: 104 TKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAKGRKVLCTKSNPSSGK 153


>gb|AFK45087.1| unknown [Lotus japonicus]
          Length = 146

 Score =  110 bits (274), Expect = 8e-22
 Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
 Frame = -3

Query: 658 GVLLGLEMSSNCAEKTVKRRGLVVQA-KKYLLCQTKRNRSRKSLARTHGFRKRMSTTSGR 482
           G+ LGL++ SN      KRRGLVV+A KK+ LCQTKRNRSRKSLARTHGFR+RM TT GR
Sbjct: 63  GLSLGLDLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRRMRTTGGR 122

Query: 481 AVIKRRRSKGRWDLCPKTNHSSGK 410
           A+++RRR+KGR  LC KT+ +SGK
Sbjct: 123 AILRRRRAKGRKVLCTKTHPNSGK 146


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