BLASTX nr result

ID: Cephaelis21_contig00003394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003394
         (2410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   360   1e-96
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   347   9e-93
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  343   1e-91
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   337   9e-90
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni...   337   9e-90

>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  360 bits (924), Expect = 1e-96
 Identities = 193/319 (60%), Positives = 208/319 (65%), Gaps = 3/319 (0%)
 Frame = -1

Query: 2290 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 2111
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 2110 GVDPQGQPIDPHKMQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1931
            GVD  G PIDP K+Q             LSKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1930 HAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 1751
            HAANA++NLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL
Sbjct: 121  HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 1750 RRQLFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRKHRSIXXXXX 1580
            RRQLFG                                         R+R+HRS      
Sbjct: 181  RRQLFGKSHGRHSRSRSRSPYRHRSHEERSHRSHSRKYDDRDHHHESRSRRHRSTSPRHR 240

Query: 1579 XXXXXXXXXXXXXXXXXXXXXSEERRARIEQWNREREEAAAVNKVQADSGSRKDEREENG 1400
                                 SEERRARIEQWNRERE+     KV A+  +  +  + +G
Sbjct: 241  RGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINNGNASKHHG 300

Query: 1399 YDQNGDGYYRQEPNQSGYG 1343
            + Q       QEP     G
Sbjct: 301  HQQQ-----EQEPQSPQEG 314


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
          Length = 343

 Score =  347 bits (890), Expect = 9e-93
 Identities = 165/186 (88%), Positives = 170/186 (91%)
 Frame = -1

Query: 2290 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 2111
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 2110 GVDPQGQPIDPHKMQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1931
            GVDPQGQP+DP K+Q             LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1930 HAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 1751
            HAANAL+NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 1750 RRQLFG 1733
            RRQLFG
Sbjct: 181  RRQLFG 186


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  343 bits (880), Expect = 1e-91
 Identities = 163/186 (87%), Positives = 169/186 (90%)
 Frame = -1

Query: 2290 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 2111
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 2110 GVDPQGQPIDPHKMQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1931
            GVDPQGQP+DP K+Q             LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1930 HAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 1751
            HA  AL+NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121  HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1750 RRQLFG 1733
            RRQLFG
Sbjct: 181  RRQLFG 186


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  337 bits (864), Expect = 9e-90
 Identities = 161/186 (86%), Positives = 167/186 (89%)
 Frame = -1

Query: 2290 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 2111
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 2110 GVDPQGQPIDPHKMQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1931
            GVDPQGQ +DP K+Q             LSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1930 HAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 1751
             AANAL NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1750 RRQLFG 1733
            RR+LFG
Sbjct: 181  RRRLFG 186


>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  337 bits (864), Expect = 9e-90
 Identities = 161/186 (86%), Positives = 167/186 (89%)
 Frame = -1

Query: 2290 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 2111
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 2110 GVDPQGQPIDPHKMQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 1931
            GVDPQGQ +DP K+Q             LSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1930 HAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 1751
             AANAL NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1750 RRQLFG 1733
            RR+LFG
Sbjct: 181  RRRLFG 186


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