BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003384
         (5361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46868.1| phytochrome A [Solanum tuberosum]                     1806   0.0  
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...  1801   0.0  
sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb...  1800   0.0  
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...  1790   0.0  
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...  1768   0.0  

>gb|ABA46868.1| phytochrome A [Solanum tuberosum]
          Length = 1123

 Score = 1806 bits (4679), Expect = 0.0
 Identities = 901/1116 (80%), Positives = 986/1116 (88%), Gaps = 1/1116 (0%)
 Frame = +2

Query: 278  IIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVPGGEQKPRSDKVTTAYLHQIQKGKFIQ 457
            IIAQTSIDAKLHA              VRVT+V G E++P+SDKVTTAYLHQIQKGKFIQ
Sbjct: 22   IIAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEERPKSDKVTTAYLHQIQKGKFIQ 81

Query: 458  PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVIGIGTDIRTIFTNPSAAAL 637
            PFG LLALDEKT KVIA+SENAPEMLTMVSHAVPSVG+HPV+GIGTDIRTIFT PS AAL
Sbjct: 82   PFGSLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPSGAAL 141

Query: 638  HKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 817
             KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSY
Sbjct: 142  QKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 818  KLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMTEVRKPGL 997
            KLAAKAITRLQSLPSGS++RLCDTMVQEVFELTGYDRVM YKFHDDDHGEV++E+ KPGL
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEITKPGL 261

Query: 998  EPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDDKLPFDLTLCGSTLRAPH 1177
            EPY+GLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV+QD+KLPFDLTLCGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPH 321

Query: 1178 TCHLQYMENMNSIASLVMAVVINXXXXXXXXXXXXXXXKRKRLWGLVVCHNTTPRFVPFP 1357
             CHLQYMENMNS+ASLVMAVV+N               KRKRLWGLVVCHNTTPRFVPFP
Sbjct: 322  YCHLQYMENMNSVASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 1358 LRYACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLLRDAPWGIVSQSPNIMDL 1537
            LRYACEFL QVFAIHVNKELELENQ +EKNIL+TQTLLCDML+RDAP GIVSQSPNIMDL
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDL 441

Query: 1538 VKCDGAALVYKNKIHRMGLTPTDFQLNDIVSWLSEYHMDSTGLSTDSLYDAGFPGALALG 1717
            VKCDGAAL+YKNKIHR+G+ P+DFQL+DIVSWL EYH DSTGLSTDSLYDAGFPGALALG
Sbjct: 442  VKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALG 501

Query: 1718 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGAKDDGRKMHPRSSFKAFLEVVK 1897
            DAVCGMAAVRISDKDWLFW+RSHTAAE+RWGGAKHE G KDDGRKMHPRSSFKAFLEVVK
Sbjct: 502  DAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 561

Query: 1898 TRSLPWKDYEMDAIHSLQLILRNASKE-DENKSDSQAIHTKLNDLRIDGLQELEAVTSEM 2074
            TRS+PWKDYEMDAIHSLQLILRNA K+ D   S++ +IHTKLNDLRIDG+QELEAVT+EM
Sbjct: 562  TRSIPWKDYEMDAIHSLQLILRNAFKDADAVNSNTNSIHTKLNDLRIDGMQELEAVTAEM 621

Query: 2075 VRLIETASVPILAVDVDGVVNGWNTKIADLTGLSVDEAIGQQFLMLVEDSSAEAVIKMLE 2254
            +RLIETASVPI AVDVDG VNGWNTK+A+LTGL VDEAIG+  L LVEDSS + V KMLE
Sbjct: 622  IRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLE 681

Query: 2255 LALLGREEQNVHFEIKTHGSKRDAGPVSLIVNACASRDVRGSVVGVCFVAQDITGQKTIM 2434
            LAL G+EE+NV FEIK HG  RD+ P+SLIVNACAS+DVR SVVGVCF+AQDITGQK+IM
Sbjct: 682  LALQGKEERNVEFEIKAHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITGQKSIM 741

Query: 2435 DKFTRIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNSAMTKISGWRREEVIDKMLLGEV 2614
            DKFTRIEGDYRA            FGTD+FGWCSEWNSAMTK++GWRR++V+DKMLLGEV
Sbjct: 742  DKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVMDKMLLGEV 801

Query: 2615 FGTHTSCCRLRNQETFVNLGVLLNNAITGQESEKIPFGFFARNGKYIECLLCVSKKLDGE 2794
            FGT  +CCRL+NQE FVN GV+LNNAITGQESEKIPFGFF R GKY+ECLLCVSK+LD E
Sbjct: 802  FGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFGRYGKYVECLLCVSKRLDKE 861

Query: 2795 GAVTGVFCFLQLASPELQQALHVQRLSEETALKRLKVLAYIRRQIKNPLSGIIFSRKMLE 2974
            GAVTG+FCFLQLAS ELQQALHVQRLSE+TALKRLKVLAYIRRQIKNPLSGIIFS KMLE
Sbjct: 862  GAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIKNPLSGIIFSWKMLE 921

Query: 2975 VTELGEDQRNLLNTSAQCQRQLNKILDDTDLDSIIEGYLDLEMVEFKLHEVLVAAISQVM 3154
             T LGE+Q+N+L+TSAQCQRQLNKILDDTDLDSIIEGYLDLEM+EFKLHEVLVA+ISQVM
Sbjct: 922  GTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIEGYLDLEMLEFKLHEVLVASISQVM 981

Query: 3155 MKSTAKGIMIANNLPETLMNDTLYGDSVRLQQVLANFLLVSVNFTPNGGQLAIAGNLSKD 3334
            MKS  K IMI+N++ E L+N+TLYGDS RLQQVLANFLLVSVN TP+GGQL+I+G L+KD
Sbjct: 982  MKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGQLSISGRLTKD 1041

Query: 3335 QLGESVQLAHLEFRIMHAGGGVPEELLNEMFGSNGEASDEGIGLLXXXXXXXXXXXXXXX 3514
            ++GESVQLA LEFRI H GGGVPEELL++M GS  +AS+EGI LL               
Sbjct: 1042 RIGESVQLALLEFRIRHTGGGVPEELLSQMLGSEVDASEEGIFLL--------------- 1086

Query: 3515 XXXXXXXISRKLVKLMNGDVQYLREAGRSTFIVSVE 3622
                   +SRKLVKLMNG+VQYLREAGRSTFI+SVE
Sbjct: 1087 -------VSRKLVKLMNGEVQYLREAGRSTFIISVE 1115


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score = 1801 bits (4666), Expect = 0.0
 Identities = 898/1116 (80%), Positives = 987/1116 (88%), Gaps = 1/1116 (0%)
 Frame = +2

Query: 278  IIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVPGGEQKPRSDKVTTAYLHQIQKGKFIQ 457
            I+AQTSIDAKLHA              VRVT+V G E+KP+SDKVTTAYLHQIQKGKFIQ
Sbjct: 22   IVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQKGKFIQ 81

Query: 458  PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVIGIGTDIRTIFTNPSAAAL 637
            PFGCLLALDEKT KVIA+SENAPEMLTMVSHAVPSVG+HPV+GIGTDIRTIFT PS AAL
Sbjct: 82   PFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPSGAAL 141

Query: 638  HKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 817
             KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSY
Sbjct: 142  QKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAGALQSY 201

Query: 818  KLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMTEVRKPGL 997
            KLAAKAITRLQSLPSGS++RLCDTMVQEVFELTGYDRVM YKFH+DDHGEV++E+ KPGL
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEITKPGL 261

Query: 998  EPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDDKLPFDLTLCGSTLRAPH 1177
            EPY+GLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV+QD+KLPFDLTLCGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPH 321

Query: 1178 TCHLQYMENMNSIASLVMAVVINXXXXXXXXXXXXXXXKRKRLWGLVVCHNTTPRFVPFP 1357
             CHLQYMENMNSIASLVMAVV+N               KRKRLWGLVVCHNTTPRFVPFP
Sbjct: 322  YCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 1358 LRYACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLLRDAPWGIVSQSPNIMDL 1537
            LRYACEFL QVFAIHVNKELELENQ +EKNIL+TQTLLCDML+RDAP GIVSQSPNIMDL
Sbjct: 382  LRYACEFLAQVFAIHVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDL 441

Query: 1538 VKCDGAALVYKNKIHRMGLTPTDFQLNDIVSWLSEYHMDSTGLSTDSLYDAGFPGALALG 1717
            VKCDGAAL+YKNKIHR+G+ P+DFQL DIVSWL EYH DSTGLSTDSLYDAGFPGALALG
Sbjct: 442  VKCDGAALLYKNKIHRLGMNPSDFQLQDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALG 501

Query: 1718 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGAKDDGRKMHPRSSFKAFLEVVK 1897
            DAVCGMAAVRISDKDWLFWFRSHTAAE+RWGGAKHE G KDDGRKMHPRSSFKAFLEVVK
Sbjct: 502  DAVCGMAAVRISDKDWLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 561

Query: 1898 TRSLPWKDYEMDAIHSLQLILRNASKEDE-NKSDSQAIHTKLNDLRIDGLQELEAVTSEM 2074
            TRS+PWKDYEMDAIHSLQLILRNA K+ E   S++ +I+ KLNDL+IDG+QELE+VT+EM
Sbjct: 562  TRSIPWKDYEMDAIHSLQLILRNAFKDAEVVNSNTNSIYKKLNDLKIDGMQELESVTAEM 621

Query: 2075 VRLIETASVPILAVDVDGVVNGWNTKIADLTGLSVDEAIGQQFLMLVEDSSAEAVIKMLE 2254
            VRLIETA VPILAVDVDG VNGWNTKIA+LTGL VDEAIG+  L LVEDSS + V KMLE
Sbjct: 622  VRLIETALVPILAVDVDGQVNGWNTKIAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLE 681

Query: 2255 LALLGREEQNVHFEIKTHGSKRDAGPVSLIVNACASRDVRGSVVGVCFVAQDITGQKTIM 2434
            LAL G+EE+NV FEIKTHG  RD+ P+SLIVNACAS+DVR +VVGVCF+A DITGQK+IM
Sbjct: 682  LALQGKEEKNVEFEIKTHGPSRDSSPISLIVNACASKDVRDNVVGVCFMAHDITGQKSIM 741

Query: 2435 DKFTRIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNSAMTKISGWRREEVIDKMLLGEV 2614
            DKFTRIEGDYRA            FGTD+FGWCSEWN+AMTK++GWRR++V+DKMLLGEV
Sbjct: 742  DKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNTAMTKLTGWRRDDVMDKMLLGEV 801

Query: 2615 FGTHTSCCRLRNQETFVNLGVLLNNAITGQESEKIPFGFFARNGKYIECLLCVSKKLDGE 2794
            FGT  +CCRL+NQE FVN GV+LNNAITGQESEKIPFGFFAR GKY+ECLLCVSK+LD E
Sbjct: 802  FGTQAACCRLKNQEAFVNFGVVLNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDKE 861

Query: 2795 GAVTGVFCFLQLASPELQQALHVQRLSEETALKRLKVLAYIRRQIKNPLSGIIFSRKMLE 2974
            GAVTG+FCFLQLAS ELQQAL+VQRLSE+TALKRLKVLAYIRRQI+NPLSGIIFSRKMLE
Sbjct: 862  GAVTGLFCFLQLASHELQQALYVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLE 921

Query: 2975 VTELGEDQRNLLNTSAQCQRQLNKILDDTDLDSIIEGYLDLEMVEFKLHEVLVAAISQVM 3154
             T LGE+Q+N+L+TSAQCQRQLNKILDDTDLDSII+GYLDLEM+EFKLHEVLVA+ISQVM
Sbjct: 922  GTSLGEEQKNILHTSAQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQVM 981

Query: 3155 MKSTAKGIMIANNLPETLMNDTLYGDSVRLQQVLANFLLVSVNFTPNGGQLAIAGNLSKD 3334
            MKS  K IMI+N++ E L+N+TLYGDS RLQQVLANFLLVSVN TP+GGQL+I+G L+KD
Sbjct: 982  MKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNATPSGGQLSISGRLTKD 1041

Query: 3335 QLGESVQLAHLEFRIMHAGGGVPEELLNEMFGSNGEASDEGIGLLXXXXXXXXXXXXXXX 3514
            ++GESVQLA LEFRI H GGGVPEELL +MFGS  +AS+EGI LL               
Sbjct: 1042 RIGESVQLALLEFRIRHTGGGVPEELLGQMFGSEADASEEGISLL--------------- 1086

Query: 3515 XXXXXXXISRKLVKLMNGDVQYLREAGRSTFIVSVE 3622
                   +SRKLVKLMNG+VQYLREAG+STFI+SVE
Sbjct: 1087 -------VSRKLVKLMNGEVQYLREAGQSTFIISVE 1115


>sp|P30733.2|PHYA_SOLTU RecName: Full=Phytochrome A gi|7550158|gb|AAB21533.2| type A
            phytochrome [Solanum tuberosum]
          Length = 1123

 Score = 1800 bits (4661), Expect = 0.0
 Identities = 898/1116 (80%), Positives = 984/1116 (88%), Gaps = 1/1116 (0%)
 Frame = +2

Query: 278  IIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVPGGEQKPRSDKVTTAYLHQIQKGKFIQ 457
            IIAQTSIDAKLHA              VRVTNV  GEQ+P+SDKVTTAYLHQIQKGKFIQ
Sbjct: 22   IIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQKGKFIQ 81

Query: 458  PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVIGIGTDIRTIFTNPSAAAL 637
            PFGCLLALDEKT KVIA+SENAPEMLTMVSHAVPSVG+HPV+GIG DIRTIFT PS AAL
Sbjct: 82   PFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGIDIRTIFTGPSGAAL 141

Query: 638  HKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 817
             KALGFGEVSLLNP+LVHCK SGKPFYAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSY
Sbjct: 142  QKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 818  KLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMTEVRKPGL 997
            KLAAKAITRLQSLPSGS++RLCDTMVQEVFELTGYDRVM YKFHDDDHGEV++E+ KPGL
Sbjct: 202  KLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEITKPGL 261

Query: 998  EPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDDKLPFDLTLCGSTLRAPH 1177
            EPY+GLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV+QD+KLPFDLTLCGSTLRAPH
Sbjct: 262  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPH 321

Query: 1178 TCHLQYMENMNSIASLVMAVVINXXXXXXXXXXXXXXXKRKRLWGLVVCHNTTPRFVPFP 1357
             CHLQYMENMNSIASLVMAVV+N               KRKRLWGLVV HNTTPRF PFP
Sbjct: 322  YCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVSHNTTPRFAPFP 381

Query: 1358 LRYACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLLRDAPWGIVSQSPNIMDL 1537
            LRYACEFL QVFAI VNKELELENQ +EKNIL+TQTLLCDML+RDAP GIVSQSPNIMDL
Sbjct: 382  LRYACEFLAQVFAILVNKELELENQFLEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDL 441

Query: 1538 VKCDGAALVYKNKIHRMGLTPTDFQLNDIVSWLSEYHMDSTGLSTDSLYDAGFPGALALG 1717
            +KCDGAAL+YKNKIHR+G+ P+DFQL+DIVSWL EYH DSTGLSTDSLYDAGFPGALALG
Sbjct: 442  IKCDGAALLYKNKIHRLGMNPSDFQLHDIVSWLCEYHTDSTGLSTDSLYDAGFPGALALG 501

Query: 1718 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGAKDDGRKMHPRSSFKAFLEVVK 1897
            DAVCGMAAVRISDKDWLFW+RSHTAAE+RWGGAKHE G KDDGRKMHPRSSFK FLEVVK
Sbjct: 502  DAVCGMAAVRISDKDWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKGFLEVVK 561

Query: 1898 TRSLPWKDYEMDAIHSLQLILRNASKE-DENKSDSQAIHTKLNDLRIDGLQELEAVTSEM 2074
            TRS+PWKDYEMD IHSLQLILRNA K+ D   S++ +IHTKLNDL+IDG+QELEAVT+EM
Sbjct: 562  TRSIPWKDYEMDRIHSLQLILRNAFKDADAVNSNTISIHTKLNDLKIDGMQELEAVTAEM 621

Query: 2075 VRLIETASVPILAVDVDGVVNGWNTKIADLTGLSVDEAIGQQFLMLVEDSSAEAVIKMLE 2254
            VRLIETASVPI AVDVDG VNGWNTK+A+LTGL VDEAIG+  L LVEDSS + V KMLE
Sbjct: 622  VRLIETASVPIFAVDVDGQVNGWNTKVAELTGLPVDEAIGKHLLTLVEDSSVDTVNKMLE 681

Query: 2255 LALLGREEQNVHFEIKTHGSKRDAGPVSLIVNACASRDVRGSVVGVCFVAQDITGQKTIM 2434
            LAL G+EE+NV FEIKTHG  RD+ P+SLIVNACAS+DVR SVVGVCF+AQDITGQK+IM
Sbjct: 682  LALQGQEERNVEFEIKTHGPSRDSSPISLIVNACASKDVRDSVVGVCFIAQDITGQKSIM 741

Query: 2435 DKFTRIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNSAMTKISGWRREEVIDKMLLGEV 2614
            DKFTRIEGDYRA            FGTD+FGWCSEWNSAMT ++GWRR++V+DKMLLGEV
Sbjct: 742  DKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTMLTGWRRDDVMDKMLLGEV 801

Query: 2615 FGTHTSCCRLRNQETFVNLGVLLNNAITGQESEKIPFGFFARNGKYIECLLCVSKKLDGE 2794
            FGT  +CCRL+NQE FVN GV+LNNAITGQESEKIPFGFFAR GKY+ECLLCVSK+LD E
Sbjct: 802  FGTQAACCRLKNQEAFVNFGVILNNAITGQESEKIPFGFFARYGKYVECLLCVSKRLDKE 861

Query: 2795 GAVTGVFCFLQLASPELQQALHVQRLSEETALKRLKVLAYIRRQIKNPLSGIIFSRKMLE 2974
            GAVTG+FCFLQLAS ELQQALHVQRLSE+TALKRLKVLAYIRRQI+NPLSGIIFSRKMLE
Sbjct: 862  GAVTGLFCFLQLASHELQQALHVQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLE 921

Query: 2975 VTELGEDQRNLLNTSAQCQRQLNKILDDTDLDSIIEGYLDLEMVEFKLHEVLVAAISQVM 3154
             T LGE+Q+N+L+TSAQCQRQL+KILDDTDLDSIIEGYLDLEM+EFKLHEVLVA+ISQVM
Sbjct: 922  GTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSIIEGYLDLEMLEFKLHEVLVASISQVM 981

Query: 3155 MKSTAKGIMIANNLPETLMNDTLYGDSVRLQQVLANFLLVSVNFTPNGGQLAIAGNLSKD 3334
            MKS  K IMI+N++ E L+N+TLYGDS RLQQVLANFLLVSVN TP+GG+L+I+G L+KD
Sbjct: 982  MKSNGKNIMISNDMVEDLLNETLYGDSPRLQQVLANFLLVSVNSTPSGGKLSISGKLTKD 1041

Query: 3335 QLGESVQLAHLEFRIMHAGGGVPEELLNEMFGSNGEASDEGIGLLXXXXXXXXXXXXXXX 3514
            ++GESVQLA LEFRI H GGGVPEELL++MFGS  +AS+EGI LL               
Sbjct: 1042 RIGESVQLALLEFRIRHTGGGVPEELLSQMFGSEADASEEGISLL--------------- 1086

Query: 3515 XXXXXXXISRKLVKLMNGDVQYLREAGRSTFIVSVE 3622
                   +SRKLVKLMNG+VQYLREAGRSTFI+SVE
Sbjct: 1087 -------VSRKLVKLMNGEVQYLREAGRSTFIISVE 1115


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score = 1790 bits (4635), Expect = 0.0
 Identities = 894/1116 (80%), Positives = 981/1116 (87%), Gaps = 1/1116 (0%)
 Frame = +2

Query: 278  IIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVPGGEQKPRSDKVTTAYLHQIQKGKFIQ 457
            IIAQT+IDAKLHA              VRVT+V G E+KP+SD+VTTAYL+QIQKGKFIQ
Sbjct: 22   IIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERKPKSDRVTTAYLNQIQKGKFIQ 81

Query: 458  PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVIGIGTDIRTIFTNPSAAAL 637
            PFGCLLALDEKTFKVIA+SENAPEMLTMVSHAVPSVG+ P +GIGTDIRTIFT PSAAAL
Sbjct: 82   PFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGPSAAAL 141

Query: 638  HKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 817
             KALGFGEVSLLNP+LVHCKTSGKP+YAIVHRVTGSLI+DFEPVKPYEVPMTAAGALQSY
Sbjct: 142  QKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 201

Query: 818  KLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMTEVRKPGL 997
            KLAAKAITRLQ+LPSGS++RLCDTMVQEVFELTGYDRVM YKFHDDDHGEV+ E+ KPGL
Sbjct: 202  KLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEITKPGL 261

Query: 998  EPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDDKLPFDLTLCGSTLRAPH 1177
            +PY+GLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV+QD+KLPFDLTLCGSTLRAPH
Sbjct: 262  DPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTLRAPH 321

Query: 1178 TCHLQYMENMNSIASLVMAVVINXXXXXXXXXXXXXXXKRKRLWGLVVCHNTTPRFVPFP 1357
             CHLQYMENM+SIASLVMAVV+N               KRKRLWGLVVCHNTTPRFVPFP
Sbjct: 322  YCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPRFVPFP 381

Query: 1358 LRYACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLLRDAPWGIVSQSPNIMDL 1537
            LRYACEFL QVFAIHVNKELELE+QI+EKNIL+TQTLLCDML+R AP GIVSQSPNIMDL
Sbjct: 382  LRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRVAPLGIVSQSPNIMDL 441

Query: 1538 VKCDGAALVYKNKIHRMGLTPTDFQLNDIVSWLSEYHMDSTGLSTDSLYDAGFPGALALG 1717
            VKCDGAAL+YKNKIHR+G+TP+DFQL+DIVSWLSEYH DSTGLSTDSLYDAGFPGALALG
Sbjct: 442  VKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTDSTGLSTDSLYDAGFPGALALG 501

Query: 1718 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGAKDDGRKMHPRSSFKAFLEVVK 1897
            D VCGMAAVRISDK WLFW+RSHTAAE+RWGGAKHE G KDDGRKMHPRSSFKAFLEVVK
Sbjct: 502  DVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 561

Query: 1898 TRSLPWKDYEMDAIHSLQLILRNASKE-DENKSDSQAIHTKLNDLRIDGLQELEAVTSEM 2074
            TRS+PWKDYEMDAIHSLQLILRNASK+ D   S++  IHTKLNDL+IDGLQELEAVT+EM
Sbjct: 562  TRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIHTKLNDLKIDGLQELEAVTAEM 621

Query: 2075 VRLIETASVPILAVDVDGVVNGWNTKIADLTGLSVDEAIGQQFLMLVEDSSAEAVIKMLE 2254
            VRLIETASVPI AVDVDG +NGWNTKIA+LTGL VDEAIG   L LVEDSS + V KMLE
Sbjct: 622  VRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAIGNHLLTLVEDSSVDTVSKMLE 681

Query: 2255 LALLGREEQNVHFEIKTHGSKRDAGPVSLIVNACASRDVRGSVVGVCFVAQDITGQKTIM 2434
            LAL G+EE+NV FEIKTHG   D+ P+SLIVNACASRDV  SVVGVCF+AQDITGQK IM
Sbjct: 682  LALQGKEERNVEFEIKTHGPSGDSSPISLIVNACASRDVGDSVVGVCFIAQDITGQKNIM 741

Query: 2435 DKFTRIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNSAMTKISGWRREEVIDKMLLGEV 2614
            DKFTRIEGDYRA            FGTD+FGWCSEWNSAMTK++GWRR++VIDKMLLGEV
Sbjct: 742  DKFTRIEGDYRAIIQNPHPLIPPIFGTDQFGWCSEWNSAMTKLTGWRRDDVIDKMLLGEV 801

Query: 2615 FGTHTSCCRLRNQETFVNLGVLLNNAITGQESEKIPFGFFARNGKYIECLLCVSKKLDGE 2794
            FGT  +CCRL+NQE FVN GV+LNNA+TGQE  KI FGFFARNGKY+ECLLCVSK+LD E
Sbjct: 802  FGTQAACCRLKNQEAFVNFGVVLNNAMTGQECAKISFGFFARNGKYVECLLCVSKRLDRE 861

Query: 2795 GAVTGVFCFLQLASPELQQALHVQRLSEETALKRLKVLAYIRRQIKNPLSGIIFSRKMLE 2974
            GAVTG+FCFLQLAS ELQQALH+QRLSE+TALKRLKVLAYIRRQI+NPLSGIIFSRKMLE
Sbjct: 862  GAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGIIFSRKMLE 921

Query: 2975 VTELGEDQRNLLNTSAQCQRQLNKILDDTDLDSIIEGYLDLEMVEFKLHEVLVAAISQVM 3154
             T LGE+Q+N+L TS+QCQRQLNKILDDTDLDSII+GYLDLEM+EFKLHEVLVA+ISQ+M
Sbjct: 922  GTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLVASISQIM 981

Query: 3155 MKSTAKGIMIANNLPETLMNDTLYGDSVRLQQVLANFLLVSVNFTPNGGQLAIAGNLSKD 3334
            MKS  K IMI N++ E L+N+TLYGDS RLQQVLANFLLV VN TP+GGQL+I+G L+KD
Sbjct: 982  MKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPSGGQLSISGTLTKD 1041

Query: 3335 QLGESVQLAHLEFRIMHAGGGVPEELLNEMFGSNGEASDEGIGLLXXXXXXXXXXXXXXX 3514
            ++GESVQLA LE RI H GGGVPEELL++MFG+  EAS+EGI LL               
Sbjct: 1042 RIGESVQLALLEVRISHTGGGVPEELLSQMFGTEAEASEEGISLL--------------- 1086

Query: 3515 XXXXXXXISRKLVKLMNGDVQYLREAGRSTFIVSVE 3622
                   ISRKLVKLMNG+VQYLREAGRSTFI+SVE
Sbjct: 1087 -------ISRKLVKLMNGEVQYLREAGRSTFIISVE 1115


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score = 1768 bits (4579), Expect = 0.0
 Identities = 877/1116 (78%), Positives = 980/1116 (87%), Gaps = 1/1116 (0%)
 Frame = +2

Query: 278  IIAQTSIDAKLHAXXXXXXXXXXXXXXVRVTNVPGGEQKPRSDKVTTAYLHQIQKGKFIQ 457
            IIAQT++DAKLHA              VR T   GG+Q+PRSDKVTTAYLH IQKGK IQ
Sbjct: 22   IIAQTTVDAKLHADFEESGSSFDYSSSVRFTPA-GGDQQPRSDKVTTAYLHHIQKGKLIQ 80

Query: 458  PFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPVIGIGTDIRTIFTNPSAAAL 637
            PFG LLALDEKTFKVIAYSENAPEMLTMVSHAVPSVG+HPV+GIGTD+RTIF+ PSA+AL
Sbjct: 81   PFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSASAL 140

Query: 638  HKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGALQSY 817
            HKALGFGEVSLLNPILVHCKTSGKPFYAI+HRVTGSLI+DFEPVKPYEVPMTAAGALQSY
Sbjct: 141  HKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGALQSY 200

Query: 818  KLAAKAITRLQSLPSGSLDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVMTEVRKPGL 997
            KLAAKAITRLQSLPSGSL+RLCDTMVQEVFELTGYDRVMAYKFHDDDHGEV++E+ KPGL
Sbjct: 201  KLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITKPGL 260

Query: 998  EPYVGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVIQDDKLPFDLTLCGSTLRAPH 1177
            EPY+GLHYPATDIPQAARFLFMKNKVRMICDCRAKH++V+QD+KLPFDLTLCGSTLRAPH
Sbjct: 261  EPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLRAPH 320

Query: 1178 TCHLQYMENMNSIASLVMAVVINXXXXXXXXXXXXXXXKRKRLWGLVVCHNTTPRFVPFP 1357
            +CH+QYMENMNSIASLVMAVV+N               KRKRLWGLVVCH+TTPRFVPFP
Sbjct: 321  SCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFVPFP 380

Query: 1358 LRYACEFLVQVFAIHVNKELELENQIVEKNILKTQTLLCDMLLRDAPWGIVSQSPNIMDL 1537
            LRYACEFL QVFAIHVNKELELE+QI+EKNIL+TQTLLCDML+RDAP GIVSQSPN+MDL
Sbjct: 381  LRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLCDMLMRDAPLGIVSQSPNVMDL 440

Query: 1538 VKCDGAALVYKNKIHRMGLTPTDFQLNDIVSWLSEYHMDSTGLSTDSLYDAGFPGALALG 1717
            VKCDGAAL+YKNK+ R+G+TP+DFQL+DI SWLSEYHMDSTGLSTDSLYDAG+PGALALG
Sbjct: 441  VKCDGAALLYKNKVWRLGITPSDFQLHDICSWLSEYHMDSTGLSTDSLYDAGYPGALALG 500

Query: 1718 DAVCGMAAVRISDKDWLFWFRSHTAAEIRWGGAKHEAGAKDDGRKMHPRSSFKAFLEVVK 1897
            DAVCGMAAV+I+ KD LFWFRSHTAAE+RWGGAKHE G KDDGRKMHPRSSFKAFLEVVK
Sbjct: 501  DAVCGMAAVKITSKDTLFWFRSHTAAEVRWGGAKHEPGEKDDGRKMHPRSSFKAFLEVVK 560

Query: 1898 TRSLPWKDYEMDAIHSLQLILRNASKEDENKS-DSQAIHTKLNDLRIDGLQELEAVTSEM 2074
            TRSLPWKDYEMDAIHSLQLILRNA K+ E    ++ AIHTKLNDL+I+G+QELEAVTSEM
Sbjct: 561  TRSLPWKDYEMDAIHSLQLILRNAFKDSEAMDVNTNAIHTKLNDLKIEGMQELEAVTSEM 620

Query: 2075 VRLIETASVPILAVDVDGVVNGWNTKIADLTGLSVDEAIGQQFLMLVEDSSAEAVIKMLE 2254
            VRLIETASVPILAVDVDG+VNGWNTKI++LT L VD+AIG   L LVEDSSA+ V KML 
Sbjct: 621  VRLIETASVPILAVDVDGLVNGWNTKISELTSLPVDKAIGMHLLTLVEDSSADTVKKMLH 680

Query: 2255 LALLGREEQNVHFEIKTHGSKRDAGPVSLIVNACASRDVRGSVVGVCFVAQDITGQKTIM 2434
            LAL G+EEQNV FEIKTHGSKRD+GP+SL+VNACASRD+  +VVGVCFVAQDIT QKT+M
Sbjct: 681  LALQGQEEQNVQFEIKTHGSKRDSGPISLVVNACASRDLHENVVGVCFVAQDITSQKTVM 740

Query: 2435 DKFTRIEGDYRAXXXXXXXXXXXXFGTDEFGWCSEWNSAMTKISGWRREEVIDKMLLGEV 2614
            DKFTRIEGDY+A            FGTDEFGWCSEWN AM K+SGW REEV+DKMLLGEV
Sbjct: 741  DKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPAMVKLSGWNREEVMDKMLLGEV 800

Query: 2615 FGTHTSCCRLRNQETFVNLGVLLNNAITGQESEKIPFGFFARNGKYIECLLCVSKKLDGE 2794
            FGTH +CCRL+N+E FV LG++LN+ +TG+ESEK+ FGFF+++GKY+ECLL VSKKLD E
Sbjct: 801  FGTHMACCRLKNREAFVGLGIVLNSVMTGRESEKVSFGFFSKSGKYVECLLSVSKKLDRE 860

Query: 2795 GAVTGVFCFLQLASPELQQALHVQRLSEETALKRLKVLAYIRRQIKNPLSGIIFSRKMLE 2974
            GAVTGVFCFLQLAS ELQQALH+QRLSE+TALKRLK LAYI+RQIKNPLSGIIFSRKM+E
Sbjct: 861  GAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGIIFSRKMME 920

Query: 2975 VTELGEDQRNLLNTSAQCQRQLNKILDDTDLDSIIEGYLDLEMVEFKLHEVLVAAISQVM 3154
             T+LGE+Q+ +L+TSAQCQRQL+KILDD DLDSIIEGYLDLEMVEF L EVLVA+ISQVM
Sbjct: 921  DTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLVASISQVM 980

Query: 3155 MKSTAKGIMIANNLPETLMNDTLYGDSVRLQQVLANFLLVSVNFTPNGGQLAIAGNLSKD 3334
            +KS  KGI I N+  E +M +TLYGD +RLQQVLA+FLL+SVNFTP GGQL++A +L KD
Sbjct: 981  IKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSVAASLIKD 1040

Query: 3335 QLGESVQLAHLEFRIMHAGGGVPEELLNEMFGSNGEASDEGIGLLXXXXXXXXXXXXXXX 3514
            +LGESV L HLE RI HAG GVPE+LLN+MFG+NG+AS+EGI LL               
Sbjct: 1041 RLGESVHLVHLELRITHAGNGVPEQLLNQMFGNNGDASEEGISLL--------------- 1085

Query: 3515 XXXXXXXISRKLVKLMNGDVQYLREAGRSTFIVSVE 3622
                   ISRKLVKLMNGDVQYLREAG+STFI+S+E
Sbjct: 1086 -------ISRKLVKLMNGDVQYLREAGKSTFIISIE 1114