BLASTX nr result
ID: Cephaelis21_contig00003335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00003335
(2319 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum] 533 0.0
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 530 0.0
gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [... 514 0.0
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [... 513 0.0
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2... 507 0.0
>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 533 bits (1372), Expect(2) = 0.0
Identities = 259/323 (80%), Positives = 280/323 (86%), Gaps = 7/323 (2%)
Frame = +3
Query: 624 GLPVQVRDTALNINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPSDTILKLQ 803
GLPVQVRDTAL+INSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVR +DTI+KLQ
Sbjct: 90 GLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRANDTIMKLQ 149
Query: 804 RTTPYYKRNRAHVCSFFVRGECTRGLECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 983
RTTPYYKRNRAHVCSF++RG+CTRGLECPYRHEMP TGELSQQNIKDRYYGVNDPVALKL
Sbjct: 150 RTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVALKL 209
Query: 984 LNKAGEMPSLEPPEDESIRTLYVGGLDKRISEQDLRDHFYAHGEIESIKMVIAKACAFVT 1163
LNKAGEMPSLEPP+DESIRTLYVGG+D RI+EQDLRDHFYAHGEIESIKMV+ + CAFVT
Sbjct: 210 LNKAGEMPSLEPPDDESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVT 269
Query: 1164 YTTRXXXXXXXXXXXNKLVIKGLRLKLFWGKPQAQKPESEVSDEARQQAAVAHSGLLPRS 1343
YTTR NKLVIKGLRLKL WG+PQ KPESEVSDEARQQAA+ HSGLLPR+
Sbjct: 270 YTTREGAVKAAEELANKLVIKGLRLKLLWGRPQVPKPESEVSDEARQQAALTHSGLLPRA 329
Query: 1344 VISQQQNQPLQPPGTQDQPQAMPYFNIPPLPQHDRAYYPSMDPQRMGALVPSQE--XXXX 1517
V+SQQQNQPLQPPGTQDQP +MPYFNIPP+PQ DR YYPSMDPQRMGA++ SQE
Sbjct: 330 VVSQQQNQPLQPPGTQDQPPSMPYFNIPPMPQQDRPYYPSMDPQRMGAVIASQEGASSST 389
Query: 1518 XXXXXXDNKSG-----GQHYSYP 1571
+NK G G HY+YP
Sbjct: 390 AGSGPGENKIGSDHQQGHHYAYP 412
Score = 194 bits (494), Expect(2) = 0.0
Identities = 87/95 (91%), Positives = 92/95 (96%)
Frame = +1
Query: 265 MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMSKEEFGKECKICTRPFTVFRWRPGR 444
MAHRLLRD EADGWERSDFPIICESCLGD+PYVRM+K ++ KECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 445 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 549
DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQV
Sbjct: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQV 95
>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis
vinifera]
Length = 474
Score = 530 bits (1364), Expect(2) = 0.0
Identities = 258/325 (79%), Positives = 282/325 (86%), Gaps = 7/325 (2%)
Frame = +3
Query: 624 GLPVQVRDTALNINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPSDTILKLQ 803
GLPVQVRDTAL+INSNDAIPKSDVNREYFAEEHDRRARAGIDYESS+GKVRP+DTILKLQ
Sbjct: 90 GLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSFGKVRPNDTILKLQ 149
Query: 804 RTTPYYKRNRAHVCSFFVRGECTRGLECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 983
RTTPYYKRNRAHVCSF+VRGECTRG ECPYRHEMP+TGELSQQNIKDRYYGVNDPVALKL
Sbjct: 150 RTTPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVALKL 209
Query: 984 LNKAGEMPSLEPPEDESIRTLYVGGLDKRISEQDLRDHFYAHGEIESIKMVIAKACAFVT 1163
LNKAGEMPSLEPPEDESI+TLYVGGLD R++EQDLRDHFYAHGEIES++MV+ +ACAFVT
Sbjct: 210 LNKAGEMPSLEPPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVT 269
Query: 1164 YTTRXXXXXXXXXXXNKLVIKGLRLKLFWGKPQAQKPESEVSDEARQQAAVAHSGLLPRS 1343
YTTR NKLVIKGLRLKL WG+PQA KPE E S+EARQQAA+AH G+LPR+
Sbjct: 270 YTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQAPKPEGESSEEARQQAALAHGGMLPRA 329
Query: 1344 VISQQQNQPLQPPGTQDQ-PQAMPYFNIPPLPQHDRAYYPSMDPQRMGALVPSQEXXXXX 1520
VISQQQNQ +QPPGTQDQ P M YFNIPP PQ +R +YPSMDPQRMGALVPSQE
Sbjct: 330 VISQQQNQVIQPPGTQDQPPPPMHYFNIPPPPQQERTFYPSMDPQRMGALVPSQEGAPSG 389
Query: 1521 XXXXXDNKSG------GQHYSYPSM 1577
+NK+G GQHY+YP+M
Sbjct: 390 SAGPSENKAGSDKQQQGQHYAYPAM 414
Score = 196 bits (499), Expect(2) = 0.0
Identities = 87/95 (91%), Positives = 93/95 (97%)
Frame = +1
Query: 265 MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMSKEEFGKECKICTRPFTVFRWRPGR 444
MAHRLLRD+EADGWERSDFPIICESCLGDNPYVRM+K ++ KECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 445 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 549
DAR+KKTE+CQTCSKLKNVCQVCLLDLEYGLPVQV
Sbjct: 61 DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQV 95
>gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 514 bits (1325), Expect(2) = 0.0
Identities = 256/324 (79%), Positives = 278/324 (85%), Gaps = 8/324 (2%)
Frame = +3
Query: 624 GLPVQVRDTALNINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPSDTILKLQ 803
GLPVQVRDTAL+INSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVR +DTILKLQ
Sbjct: 90 GLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRANDTILKLQ 149
Query: 804 RTTPYYKRNRAHVCSFFVRGECTRGLECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 983
RTTPYYKRNRAHVCSF++RG+CTRGLECPYRHEMP TGELSQQNIKDRYYGVNDPVA+KL
Sbjct: 150 RTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAMKL 209
Query: 984 LNKAGEMPSLEPPEDESIRTLYVGGLDKRISEQDLRDHFYAHGEIESIKMVIAKACAFVT 1163
LNKAGEMPSLEPP+DESIRTLYVGG+D RISEQDLRD FYAHGEIESIKMV+ + CAFVT
Sbjct: 210 LNKAGEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVT 269
Query: 1164 YTTRXXXXXXXXXXXNKLVIKGLRLKLFWGKPQAQKPESEVSDEARQQAAVAHSGLLPRS 1343
YTTR NKLVIKGLRLKL WG+PQA KP++E+SDEARQQAAV HSGLLPR+
Sbjct: 270 YTTREGAVKAAEELANKLVIKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTHSGLLPRA 329
Query: 1344 VISQQQNQPLQPPGTQDQ-PQAMPYFNIPPLPQHDRAYYPSMDPQRMGALVPSQE-XXXX 1517
VISQQQNQ PPGTQ+Q PQ MPYFNIPP+ Q +RAYYPSMDPQRMGA+V SQ+
Sbjct: 330 VISQQQNQLPPPPGTQEQPPQPMPYFNIPPMLQQERAYYPSMDPQRMGAIVSSQDGASSS 389
Query: 1518 XXXXXXDNKSG------GQHYSYP 1571
+NK G GQHY+YP
Sbjct: 390 AAGSGPENKIGSEKHPQGQHYAYP 413
Score = 194 bits (494), Expect(2) = 0.0
Identities = 87/95 (91%), Positives = 92/95 (96%)
Frame = +1
Query: 265 MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMSKEEFGKECKICTRPFTVFRWRPGR 444
MAHRLLRD EADGWERSDFPIICESCLGD+PYVRM+K ++ KECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 445 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 549
DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQV
Sbjct: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQV 95
>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 513 bits (1320), Expect(2) = 0.0
Identities = 255/324 (78%), Positives = 277/324 (85%), Gaps = 8/324 (2%)
Frame = +3
Query: 624 GLPVQVRDTALNINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPSDTILKLQ 803
GLPVQ RDTAL+INSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVR +DTILKLQ
Sbjct: 90 GLPVQFRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRANDTILKLQ 149
Query: 804 RTTPYYKRNRAHVCSFFVRGECTRGLECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 983
RTTPYYKRNRAHVCSF++RG+CTRGLECPYRHEMP TGELSQQNIKDRYYGVNDPVA+KL
Sbjct: 150 RTTPYYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAMKL 209
Query: 984 LNKAGEMPSLEPPEDESIRTLYVGGLDKRISEQDLRDHFYAHGEIESIKMVIAKACAFVT 1163
LNKAGEMPSLEPP+DESIRTLYVGG+D RISEQDLRD FYAHGEIESIKMV+ + CAFVT
Sbjct: 210 LNKAGEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVT 269
Query: 1164 YTTRXXXXXXXXXXXNKLVIKGLRLKLFWGKPQAQKPESEVSDEARQQAAVAHSGLLPRS 1343
YTTR NKLVIKGLRLKL WG+PQA KP++E+SDEARQQAAV HSGLLPR+
Sbjct: 270 YTTREGAVKAAEELANKLVIKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTHSGLLPRA 329
Query: 1344 VISQQQNQPLQPPGTQDQP-QAMPYFNIPPLPQHDRAYYPSMDPQRMGALVPSQE-XXXX 1517
VISQQQNQ PPGTQ+QP Q MPYFNIPP+ Q +RAYYPSMDPQRMGA+V SQ+
Sbjct: 330 VISQQQNQLPPPPGTQEQPAQPMPYFNIPPMLQQERAYYPSMDPQRMGAIVSSQDGASSS 389
Query: 1518 XXXXXXDNKSG------GQHYSYP 1571
+NK G GQHY+YP
Sbjct: 390 AAGSGPENKIGSEKHPQGQHYAYP 413
Score = 193 bits (490), Expect(2) = 0.0
Identities = 86/94 (91%), Positives = 91/94 (96%)
Frame = +1
Query: 265 MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMSKEEFGKECKICTRPFTVFRWRPGR 444
MAHRLLRD EADGWERSDFPIICESCLGD+PYVRM+K ++ KECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR 60
Query: 445 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQ 546
DARYKK+EICQTCSKLKNVCQVCLLDLEYGLPVQ
Sbjct: 61 DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQ 94
>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
predicted protein [Populus trichocarpa]
Length = 531
Score = 507 bits (1305), Expect(2) = 0.0
Identities = 253/323 (78%), Positives = 272/323 (84%), Gaps = 5/323 (1%)
Frame = +3
Query: 624 GLPVQVRDTALNINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPSDTILKLQ 803
GLPVQVRDTAL+INSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGK + +DTILKLQ
Sbjct: 90 GLPVQVRDTALSINSNDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKAQANDTILKLQ 149
Query: 804 RTTPYYKRNRAHVCSFFVRGECTRGLECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKL 983
RTTPYYKRNRAHVCSFF RGECTRG ECPYRHEMP+TGELSQQNIKDRYYGVNDPVA+KL
Sbjct: 150 RTTPYYKRNRAHVCSFFARGECTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAMKL 209
Query: 984 LNKAGEMPSLEPPEDESIRTLYVGGLDKRISEQDLRDHFYAHGEIESIKMVIAKACAFVT 1163
LNKAG+MPSLEPPEDESI+TLYVGGLD RI+EQDLRD FYAHGEIESIKMV +A AFVT
Sbjct: 210 LNKAGDMPSLEPPEDESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVT 269
Query: 1164 YTTRXXXXXXXXXXXNKLVIKGLRLKLFWGKPQAQKPESEVSDEARQQAAVAHSGLLPRS 1343
YTTR N+LVIKGLRLKL WG+PQA KPESE SDEARQQAA+AHSG+LPR+
Sbjct: 270 YTTREGAEKAAAELSNRLVIKGLRLKLMWGRPQAPKPESESSDEARQQAAMAHSGMLPRA 329
Query: 1344 VISQQQNQPLQPPGTQDQPQAMPYFNIPPLPQHDRAYYPSMDPQRMGALVPSQEXXXXXX 1523
V+SQQ N L PPGTQDQ M YFNIPP PQ +RA+YPSMDPQRMGALV SQ+
Sbjct: 330 VVSQQHNH-LNPPGTQDQHPPMHYFNIPPPPQQERAFYPSMDPQRMGALVGSQDGTPNGP 388
Query: 1524 XXXXDNKSG-----GQHYSYPSM 1577
+NKSG GQHY Y SM
Sbjct: 389 AGSGENKSGLEKQLGQHYPYQSM 411
Score = 194 bits (493), Expect(2) = 0.0
Identities = 86/95 (90%), Positives = 92/95 (96%)
Frame = +1
Query: 265 MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMSKEEFGKECKICTRPFTVFRWRPGR 444
MAHRLL+D EADGWERSDFPIICESCLGDNPYVRM++ +F KECKICTRPFTVFRWRPGR
Sbjct: 1 MAHRLLKDPEADGWERSDFPIICESCLGDNPYVRMTRADFDKECKICTRPFTVFRWRPGR 60
Query: 445 DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQV 549
DAR+KKTE+CQTCSKLKNVCQVCLLDLEYGLPVQV
Sbjct: 61 DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQV 95