BLASTX nr result

ID: Cephaelis21_contig00003320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003320
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|1...   165   3e-38
ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...   164   6e-38
gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]             157   1e-35
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...   152   2e-34
ref|XP_002864345.1| RNA recognition motif-containing protein [Ar...   147   8e-33

>ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|118487492|gb|ABK95573.1|
           unknown [Populus trichocarpa]
           gi|222857640|gb|EEE95187.1| predicted protein [Populus
           trichocarpa]
          Length = 149

 Score =  165 bits (418), Expect = 3e-38
 Identities = 92/142 (64%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
 Frame = -3

Query: 546 MAMRA---AITKAAVVPRGFRALLFSTERT-SPMFNLXXXXXXXXXXXXXXPSDNLFVSG 379
           MAMRA   A+  AA  PRG    L ST  T S  F                P+ NLFVSG
Sbjct: 1   MAMRATMSALAAAAAAPRGGLLRLLSTTSTLSSSFPFPQTTQQTPAREQAEPNTNLFVSG 60

Query: 378 LSKRTTNEGLRAAFEKFGNVVEAKVVCDRVSGYSKGFGFVKYETLEEAAEGIKGMDGQFL 199
           LSKRTT EGL+ AF KFG VV+AKVV DR SGYSKGFGFV+Y TLE+AAEGIKGMDGQFL
Sbjct: 61  LSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQFL 120

Query: 198 DGWVIFAEYARPKSPPPQPQNS 133
           DGWVIFAEYARPK PP QPQN+
Sbjct: 121 DGWVIFAEYARPKQPPSQPQNN 142


>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  164 bits (415), Expect = 6e-38
 Identities = 91/143 (63%), Positives = 100/143 (69%), Gaps = 5/143 (3%)
 Frame = -3

Query: 546 MAMRAAITK----AAVVPRGFRALLFSTERTSPM-FNLXXXXXXXXXXXXXXPSDNLFVS 382
           MAMRA        AA  PRG    LFST  TS   F                P+ NLFVS
Sbjct: 1   MAMRATTAALAAAAAAAPRGGFLRLFSTTSTSSSSFPFPQTTQQTPAREQAEPNTNLFVS 60

Query: 381 GLSKRTTNEGLRAAFEKFGNVVEAKVVCDRVSGYSKGFGFVKYETLEEAAEGIKGMDGQF 202
           GLSKRTT+EGL+ AF KFG VV+A+VV DRVSGYSKGFGFVKY TLE+AAEGIKGMDGQF
Sbjct: 61  GLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQF 120

Query: 201 LDGWVIFAEYARPKSPPPQPQNS 133
           LDGWVIFAEYARP+ PP +PQN+
Sbjct: 121 LDGWVIFAEYARPRQPPSEPQNN 143


>gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
          Length = 139

 Score =  157 bits (396), Expect = 1e-35
 Identities = 75/88 (85%), Positives = 80/88 (90%)
 Frame = -3

Query: 396 NLFVSGLSKRTTNEGLRAAFEKFGNVVEAKVVCDRVSGYSKGFGFVKYETLEEAAEGIKG 217
           NLFVSGLSKRTT EGLR AF KFG VV A+VV DRVSGYSKGFGFVKY TLE+AAEGIKG
Sbjct: 37  NLFVSGLSKRTTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKG 96

Query: 216 MDGQFLDGWVIFAEYARPKSPPPQPQNS 133
           MDG+FLDGWVIFAEYARP++PPP PQNS
Sbjct: 97  MDGKFLDGWVIFAEYARPRAPPPPPQNS 124


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  152 bits (384), Expect = 2e-34
 Identities = 88/138 (63%), Positives = 96/138 (69%)
 Frame = -3

Query: 546 MAMRAAITKAAVVPRGFRALLFSTERTSPMFNLXXXXXXXXXXXXXXPSDNLFVSGLSKR 367
           MAMRAA    A  PR  R L FST    P                  PS NLFVSGLSKR
Sbjct: 1   MAMRAA----AAAPRSLRRL-FSTSTFIP----PPITAATPATPPAEPSTNLFVSGLSKR 51

Query: 366 TTNEGLRAAFEKFGNVVEAKVVCDRVSGYSKGFGFVKYETLEEAAEGIKGMDGQFLDGWV 187
           TT+EGL  AF KFG VV A+VV DRVSGYSKGFGFV+Y +LE+AAEGIKGMDG+FLDGWV
Sbjct: 52  TTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWV 111

Query: 186 IFAEYARPKSPPPQPQNS 133
           IFAEYARP+ PPP PQN+
Sbjct: 112 IFAEYARPR-PPPSPQNN 128


>ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310180|gb|EFH40604.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 156

 Score =  147 bits (371), Expect = 8e-33
 Identities = 84/153 (54%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
 Frame = -3

Query: 543 AMRAAITKAAVVPRGFRALLFSTERTSPMFNLXXXXXXXXXXXXXXPSDNLFVSGLSKRT 364
           A+  A+T+ A  P G R L F +  +   F                PS NLFVSGLSKRT
Sbjct: 9   AISRAVTEVASAPVGLRRL-FCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRT 67

Query: 363 TNEGLRAAFEKFGNVVEAKVVCDRVSGYSKGFGFVKYETLEEAAEGIKGMDGQFLDGWVI 184
           T+EGLR AF +FG V +AKVV DRVSGYSKGFGFV+Y TLE++A+GI GMDG+FLDGWVI
Sbjct: 68  TSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVI 127

Query: 183 FAEYARPK--SPPPQPQNSFTNRINNTPFPGRR 91
           FAEYARP+  S P QPQN+    ++  P+ G R
Sbjct: 128 FAEYARPREQSQPYQPQNN----MSRPPYYGNR 156


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