BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003306
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   188   2e-45
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...   169   1e-39
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   163   9e-38
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      159   1e-36
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      159   1e-36

>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  188 bits (478), Expect = 2e-45
 Identities = 111/196 (56%), Positives = 122/196 (62%), Gaps = 1/196 (0%)
 Frame = +1

Query: 313 VLNANCLSTSNSPKVFNSSKP-AKPISLISVQNLPKGLTTSKTSQDSILSNPLTGTALAG 489
           +LNA CLS  NSPK  N SKP AKPISL+S+QNLPKGLTT K+S++  LS  L GTA+AG
Sbjct: 10  MLNAKCLSI-NSPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLSTSLAGTAIAG 68

Query: 490 AIFSTLSSCDXXXXXXXXXXXXXGDNRGXXXXXXXXXXXXWVLFNILQPALNQLNQMRST 669
           AIFSTLSSCD             GDNRG            WVLFNILQPALNQLN+MRST
Sbjct: 69  AIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRST 128

Query: 670 RXXXXXXXXXXXAASGFNLIHPPQXXXXXXXXXXXXXXXXXDNRGQLLLFVILPAILWVL 849
           +           AASGF L                      DNRGQLLLFV+ PAILWVL
Sbjct: 129 KGVIIGLGLGGLAASGFML----TPHASASEIATLADAASSDNRGQLLLFVVTPAILWVL 184

Query: 850 YNILQPALNQFNRMRT 897
           YNILQPALNQ NRMR+
Sbjct: 185 YNILQPALNQLNRMRS 200


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score =  169 bits (428), Expect = 1e-39
 Identities = 98/195 (50%), Positives = 112/195 (57%)
 Frame = +1

Query: 313 VLNANCLSTSNSPKVFNSSKPAKPISLISVQNLPKGLTTSKTSQDSILSNPLTGTALAGA 492
           +LN  CLS  NS K  N     KPISL+S+Q LPKGLT SK + ++ L   L GTA+AGA
Sbjct: 6   ILNTKCLSNINSGKNINKPTTTKPISLLSMQELPKGLTISKPTNENKL---LAGTAIAGA 62

Query: 493 IFSTLSSCDXXXXXXXXXXXXXGDNRGXXXXXXXXXXXXWVLFNILQPALNQLNQMRSTR 672
           IFSTLSSCD             GDNRG            WVLFNIL+PALNQ+N+MR T+
Sbjct: 63  IFSTLSSCDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQINRMRETK 122

Query: 673 XXXXXXXXXXXAASGFNLIHPPQXXXXXXXXXXXXXXXXXDNRGQLLLFVILPAILWVLY 852
                      AA+GF    P                   DNRGQLLLFV+ PAILWVLY
Sbjct: 123 GVIIGLGLGGLAATGFMAAAP---EASASENIAMIADAASDNRGQLLLFVVAPAILWVLY 179

Query: 853 NILQPALNQFNRMRT 897
           NILQPALNQ NRMR+
Sbjct: 180 NILQPALNQINRMRS 194


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  163 bits (412), Expect = 9e-38
 Identities = 93/195 (47%), Positives = 115/195 (58%)
 Frame = +1

Query: 313 VLNANCLSTSNSPKVFNSSKPAKPISLISVQNLPKGLTTSKTSQDSILSNPLTGTALAGA 492
           +LNA CLS +++  +  +    KP+SL+S+QNLPKGLT SK + +++L    TGTA+AGA
Sbjct: 10  ILNAKCLSINSNKNISPTKPSTKPVSLLSMQNLPKGLTISKPADNTVL----TGTAIAGA 65

Query: 493 IFSTLSSCDXXXXXXXXXXXXXGDNRGXXXXXXXXXXXXWVLFNILQPALNQLNQMRSTR 672
           IF+TLSSC+             GDNRG            WVLFNILQPALNQ+N+MR T+
Sbjct: 66  IFTTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125

Query: 673 XXXXXXXXXXXAASGFNLIHPPQXXXXXXXXXXXXXXXXXDNRGQLLLFVILPAILWVLY 852
                      AASGF  I  P                  DNRG LLL V+ PAILWVLY
Sbjct: 126 GVIVGLGLGGLAASGF--ISTPH---ASASEIAMIADATSDNRGTLLLIVVAPAILWVLY 180

Query: 853 NILQPALNQFNRMRT 897
           NILQPALNQ N+MR+
Sbjct: 181 NILQPALNQINKMRS 195


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  159 bits (402), Expect = 1e-36
 Identities = 97/196 (49%), Positives = 116/196 (59%), Gaps = 1/196 (0%)
 Frame = +1

Query: 313 VLNANCLSTSNSPKVFNSSKPA-KPISLISVQNLPKGLTTSKTSQDSILSNPLTGTALAG 489
           +LNA CLS  NS K  +  KP+ KP+SL+S+ NLPKGLT SK + +++L    TGTA+AG
Sbjct: 10  ILNAKCLSI-NSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADNTVL----TGTAIAG 64

Query: 490 AIFSTLSSCDXXXXXXXXXXXXXGDNRGXXXXXXXXXXXXWVLFNILQPALNQLNQMRST 669
           AIF+TLSSC+             GDNRG            WVLFNILQPALNQ+N+MR T
Sbjct: 65  AIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQT 124

Query: 670 RXXXXXXXXXXXAASGFNLIHPPQXXXXXXXXXXXXXXXXXDNRGQLLLFVILPAILWVL 849
           +           AASGF  I  P                  DNRG LLL V+ PAILWVL
Sbjct: 125 KGVIVGLGLGGLAASGF--ISTPD---ASASEIAMIAEATSDNRGTLLLIVVAPAILWVL 179

Query: 850 YNILQPALNQFNRMRT 897
           YNILQPALNQ N+MR+
Sbjct: 180 YNILQPALNQINKMRS 195


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  159 bits (402), Expect = 1e-36
 Identities = 97/196 (49%), Positives = 116/196 (59%), Gaps = 1/196 (0%)
 Frame = +1

Query: 313 VLNANCLSTSNSPKVFNSSKPA-KPISLISVQNLPKGLTTSKTSQDSILSNPLTGTALAG 489
           +LNA CLS  NS K  +  KP+ KP+SL+S+ NLPKGLT SK + +++L    TGTA+AG
Sbjct: 10  ILNAKCLSI-NSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADNTVL----TGTAIAG 64

Query: 490 AIFSTLSSCDXXXXXXXXXXXXXGDNRGXXXXXXXXXXXXWVLFNILQPALNQLNQMRST 669
           AIF+TLSSC+             GDNRG            WVLFNILQPALNQ+N+MR T
Sbjct: 65  AIFTTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQT 124

Query: 670 RXXXXXXXXXXXAASGFNLIHPPQXXXXXXXXXXXXXXXXXDNRGQLLLFVILPAILWVL 849
           +           AASGF  I  P                  DNRG LLL V+ PAILWVL
Sbjct: 125 KGVIVGLGLGGLAASGF--ISTPD---ASASEIAMIAEAASDNRGTLLLIVVAPAILWVL 179

Query: 850 YNILQPALNQFNRMRT 897
           YNILQPALNQ N+MR+
Sbjct: 180 YNILQPALNQINKMRS 195