BLASTX nr result

ID: Cephaelis21_contig00003182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00003182
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                 329   1e-87
ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   309   8e-82
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   307   4e-81
ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|1...   301   3e-79
ref|NP_171986.3| translocon at the inner envelope membrane of ch...   298   3e-78

>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score =  329 bits (843), Expect = 1e-87
 Identities = 164/287 (57%), Positives = 189/287 (65%)
 Frame = -2

Query: 1239 MTLHGYALNYGAVSMPCKACNPNSFQSASSGISHFPTKVVFSCARSSLSPHQNLVAHSVG 1060
            M L+G  L+ G +  P KACN  S+ SASS      +KV+ +C + S +PHQ   + S G
Sbjct: 1    MILNGCYLSTGGICKPYKACNSKSYLSASSCTPLPLSKVIVTCVKRSPAPHQYPTSCSKG 60

Query: 1059 IQXXXXXXXXXXXXXXXXXXXAHTIPKLTNKRHQSKLAPRASKDVPYSYRYPPMTKKPRW 880
                                 ++ IP+L  +R Q   +PRASKDVPYSYR+PPMTKKPRW
Sbjct: 61   FSFLDLSSASSLLLSGEYGGLSNAIPQLP-RRSQLSFSPRASKDVPYSYRFPPMTKKPRW 119

Query: 879  WWRTLACFPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGALGRLPPWSLMAYFFIA 700
            WWRTLAC PYLMPLHETWMYAETAYHLHPFLED EFLTYPFLGA+GRLP W LMAYFF+A
Sbjct: 120  WWRTLACLPYLMPLHETWMYAETAYHLHPFLEDLEFLTYPFLGAIGRLPSWFLMAYFFVA 179

Query: 699  YLGIVRRKEWPHFFRFHVVMGMLLEIGLQIVGTVSRWMPTALYWGKIGXXXXXXXXXXXX 520
            YLGIVRRKEWPHF+RFHVV+GMLLEI LQ++GT+SRWMP A+YWGK+G            
Sbjct: 180  YLGIVRRKEWPHFYRFHVVIGMLLEIALQVIGTISRWMPLAVYWGKVG------------ 227

Query: 519  XXXXXXXXXXXXXXXXXXXXXXXXXLAGMYADVPFVSDAAYIQIPYD 379
                                     LAGMYADVPFV DAAYIQIPYD
Sbjct: 228  ---MHFWTAVAFAYLFTVLESIRCALAGMYADVPFVCDAAYIQIPYD 271


>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
            gi|302142547|emb|CBI19750.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  309 bits (792), Expect = 8e-82
 Identities = 156/288 (54%), Positives = 180/288 (62%), Gaps = 1/288 (0%)
 Frame = -2

Query: 1239 MTLHGYALNYGAVSMPCKACNPNSFQSASSGISHFPTKVVFSCARSSLSPHQNLVAHSVG 1060
            M L+G  +  G   M  +AC P +     +   H P +      RSS  P Q L + S G
Sbjct: 1    MILNGSVMTSGCALMDSRACKPVTSHQVFACFPHLPARTASLSIRSSWRPCQELKSWSFG 60

Query: 1059 -IQXXXXXXXXXXXXXXXXXXXAHTIPKLTNKRHQSKLAPRASKDVPYSYRYPPMTKKPR 883
             +                    +HT+P L  +R +S    RASKDVPYS+RYPPMTKKP+
Sbjct: 61   GMPLSHLSAASTPLLSGDQGGLSHTLPMLP-RRPRSPTPLRASKDVPYSFRYPPMTKKPQ 119

Query: 882  WWWRTLACFPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGALGRLPPWSLMAYFFI 703
            WWWRTLAC PYLMPLHETWMYAETAYHLHPFLEDFEF+TYPFL  +GRLP WSLMAYFFI
Sbjct: 120  WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFVTYPFLEFIGRLPSWSLMAYFFI 179

Query: 702  AYLGIVRRKEWPHFFRFHVVMGMLLEIGLQIVGTVSRWMPTALYWGKIGXXXXXXXXXXX 523
            AYLG+VR+KEWPHFFRFHVVMGMLLEI LQ++GT+SRWMP A+YWGK+G           
Sbjct: 180  AYLGVVRKKEWPHFFRFHVVMGMLLEIALQVIGTISRWMPLAVYWGKVG----------- 228

Query: 522  XXXXXXXXXXXXXXXXXXXXXXXXXXLAGMYADVPFVSDAAYIQIPYD 379
                                      LAGMYAD+PFV DAAYIQIPYD
Sbjct: 229  ----MHFWTAVAFGYLFTVLECIRCALAGMYADIPFVCDAAYIQIPYD 272


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
            gi|223551137|gb|EEF52623.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 276

 Score =  307 bits (786), Expect = 4e-81
 Identities = 158/286 (55%), Positives = 177/286 (61%), Gaps = 3/286 (1%)
 Frame = -2

Query: 1227 GYALNYGAVSMPCKACNPNSFQSASSGISHFPTKVVFSCARSSLSPHQNLVAH---SVGI 1057
            GYAL      +  + C P      S+ +    TK  F   R+S +P  NL +    S G+
Sbjct: 13   GYAL------INTRTCKPWPNSLVSACVPRLTTKAAFLDIRNSCTPVPNLESKFWLSRGL 66

Query: 1056 QXXXXXXXXXXXXXXXXXXXAHTIPKLTNKRHQSKLAPRASKDVPYSYRYPPMTKKPRWW 877
                                 H IP    +R +  L PRASKDVPYS+RYPPMTKKP+WW
Sbjct: 67   PFLSLSAASTPLLSGDQGGIWHAIPSFPRQR-RCYLCPRASKDVPYSFRYPPMTKKPKWW 125

Query: 876  WRTLACFPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGALGRLPPWSLMAYFFIAY 697
            WRTLAC PYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGA+GRLP W LMAYFF+AY
Sbjct: 126  WRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAY 185

Query: 696  LGIVRRKEWPHFFRFHVVMGMLLEIGLQIVGTVSRWMPTALYWGKIGXXXXXXXXXXXXX 517
            LG+VRRKEWPHFFRFHVVMGMLLEI LQ++GTVSRWMP A+YWGK+G             
Sbjct: 186  LGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVG------------- 232

Query: 516  XXXXXXXXXXXXXXXXXXXXXXXXLAGMYADVPFVSDAAYIQIPYD 379
                                    LAGMYADVPF  DAAYIQIPYD
Sbjct: 233  --MHFWTAIAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 276


>ref|XP_002300750.1| predicted protein [Populus trichocarpa] gi|118482844|gb|ABK93337.1|
            unknown [Populus trichocarpa] gi|222842476|gb|EEE80023.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  301 bits (770), Expect = 3e-79
 Identities = 154/288 (53%), Positives = 177/288 (61%), Gaps = 1/288 (0%)
 Frame = -2

Query: 1239 MTLHGYALNYGAVSMPCKACNPNSFQSASSGISHFPTKVVFSCARSSLSPH-QNLVAHSV 1063
            M L+G A+  G+     + C        S  + +   +     +R+SL  H ++    S 
Sbjct: 1    MILNGCAMPSGSAFSSTRTCKTMPGIMVSDHVPYTTARAALLSSRASLERHLESKSWSSR 60

Query: 1062 GIQXXXXXXXXXXXXXXXXXXXAHTIPKLTNKRHQSKLAPRASKDVPYSYRYPPMTKKPR 883
            G                     +H IP    +R +S   PRASKDVPYS+R+PPMTKKPR
Sbjct: 61   GFLSLHLSAASTPLLSGDYCGFSHYIPTFPRQR-RSYSCPRASKDVPYSFRFPPMTKKPR 119

Query: 882  WWWRTLACFPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGALGRLPPWSLMAYFFI 703
            WWWRTLAC PYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGA+GRLP W LMAYFF+
Sbjct: 120  WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 179

Query: 702  AYLGIVRRKEWPHFFRFHVVMGMLLEIGLQIVGTVSRWMPTALYWGKIGXXXXXXXXXXX 523
            AYLG+VRRKEWPHFFRFHVVMGMLLEI LQ++GTVSRWMP A+YWGK+G           
Sbjct: 180  AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLG----------- 228

Query: 522  XXXXXXXXXXXXXXXXXXXXXXXXXXLAGMYADVPFVSDAAYIQIPYD 379
                                      LAGMYADVPF  DAAYIQIPYD
Sbjct: 229  ----MHFWTAVAFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 272


>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
            [Arabidopsis thaliana]
            gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName: Full=Protein
            TIC 20-I, chloroplastic; AltName: Full=Translocon at the
            inner envelope membrane of chloroplasts 20-I;
            Short=AtTIC20-I; Flags: Precursor
            gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
            thaliana] gi|332189644|gb|AEE27765.1| translocon at the
            inner envelope membrane of chloroplasts 20 [Arabidopsis
            thaliana]
          Length = 274

 Score =  298 bits (762), Expect = 3e-78
 Identities = 154/287 (53%), Positives = 180/287 (62%), Gaps = 4/287 (1%)
 Frame = -2

Query: 1227 GYALNYGAVSMPCKACNPNSFQSASSGISHFPTK----VVFSCARSSLSPHQNLVAHSVG 1060
            GY+     V M  +A   +S+++A+    H+  +    VV +   S  SP   L   S G
Sbjct: 4    GYSTPSAHVLMSSRAFKSSSYRAAAGQTQHYLARSSLPVVKNSWGSPPSPFNELPRVSRG 63

Query: 1059 IQXXXXXXXXXXXXXXXXXXXAHTIPKLTNKRHQSKLAPRASKDVPYSYRYPPMTKKPRW 880
            +                    + T+P L  +R ++ L PRASKDVP S+R+PPMTKKP+W
Sbjct: 64   VPLSYLSASSSLLLNGEQGSLSGTLPVLPVRR-KTLLTPRASKDVPSSFRFPPMTKKPQW 122

Query: 879  WWRTLACFPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGALGRLPPWSLMAYFFIA 700
            WWRTLAC PYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGA+GRLP W LMAYFF+A
Sbjct: 123  WWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVA 182

Query: 699  YLGIVRRKEWPHFFRFHVVMGMLLEIGLQIVGTVSRWMPTALYWGKIGXXXXXXXXXXXX 520
            YLGIVRRKEWPHFFRFHVVMGMLLEI LQ++GTVS+WMP  +YWGK G            
Sbjct: 183  YLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFG------------ 230

Query: 519  XXXXXXXXXXXXXXXXXXXXXXXXXLAGMYADVPFVSDAAYIQIPYD 379
                                     LAGMYAD+PFV DAAYIQIPYD
Sbjct: 231  ---MHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274


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