BLASTX nr result

ID: Cephaelis21_contig00002961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002961
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...    61   8e-08
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...    61   8e-08

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = -1

Query: 496 DEKLEKSFISLFGKKPNMLSDIRSDLGEVDGSSEHFENMKPVEQ-TQSVTEAXXXXXXXX 320
           DEKLEKSFISLF +  N+ S+ ++D  +   S +H  N++P E   +S TE         
Sbjct: 399 DEKLEKSFISLFSRN-NISSEAQNDAKDNHRSVDHSYNLEPNELGEESDTE--------- 448

Query: 319 XXXXXXXXXXXGERTPQADPVTGTSDDSSDEEHDIGSDKQPPSKNKFMEQIDFHEGRRRR 140
                       +   Q D V     D SDEEH   + ++   +++  EQ++FH GR RR
Sbjct: 449 --DLDGSESTDEDEAAQKDAVVNGESDGSDEEHGTAAKQKADPQDRMKEQVEFHGGRLRR 506

Query: 139 KAVFG 125
           KA+FG
Sbjct: 507 KAMFG 511


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
 Frame = -1

Query: 496 DEKLEKSFISLFGKKPNMLSDIRSDLGEVDGSSEHFENMKPVEQTQSVTEAXXXXXXXXX 317
           DEKLEKSFISLFG+KP+  S  RSD      ++   EN   + + +S +E          
Sbjct: 403 DEKLEKSFISLFGRKPDNSSGARSD------TNNTLENSNGIHEIES-SEKYQPGSQEVD 455

Query: 316 XXXXXXXXXXGERTPQADPVTG----TSDDSSDEEHDIGSDKQPPSKNKFMEQIDFHEGR 149
                      E + + D +       S  + +EE++   D+  P ++   E ++FHEGR
Sbjct: 456 MLGVAHDADDSESSDEDDLIKRKAKFESVGTDEEEYNDLLDENSPVEDHMKEHVEFHEGR 515

Query: 148 RRRKAVFG 125
            RRKAVFG
Sbjct: 516 FRRKAVFG 523


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
 Frame = -1

Query: 496 DEKLEKSFISLFGKKPNMLSDIRSDLGEVDGSSEHFENMKPVEQTQSVTEAXXXXXXXXX 317
           DEKLEKSFISLFG+KP+  S  RSD      ++   EN   + + +S +E          
Sbjct: 403 DEKLEKSFISLFGRKPDNSSGARSD------TNNTLENSNGIHEIES-SEKYQPGSQEVD 455

Query: 316 XXXXXXXXXXGERTPQADPVTG----TSDDSSDEEHDIGSDKQPPSKNKFMEQIDFHEGR 149
                      E + + D +       S  + +EE++   D+  P ++   E ++FHEGR
Sbjct: 456 RLGVAHDADDSESSDEDDLIKRKAKFESVGTDEEEYNDLLDENSPVEDHMKEHVEFHEGR 515

Query: 148 RRRKAVFG 125
            RRKAVFG
Sbjct: 516 FRRKAVFG 523


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