BLASTX nr result

ID: Cephaelis21_contig00002948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002948
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   282   1e-73
ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   274   4e-71
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   272   1e-70
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   261   3e-67

>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  282 bits (721), Expect = 1e-73
 Identities = 146/307 (47%), Positives = 189/307 (61%), Gaps = 15/307 (4%)
 Frame = -2

Query: 1045 MMSDRNTHWCYTCRQPVEIRRQNAVCFNCYGGFVQELDEMLTVNL---------EEQNHR 893
            M S RNTHWCY+CR+PV +R ++A C  C GGFVQELD+M  +N          ++ ++ 
Sbjct: 4    MSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDNM 63

Query: 892  PRFIEAVSNFLRQQTSVRTNN---RGRFDLGTEHGSIWNPLLIFSGDMPVQMPGNGGLVE 722
               +EA S F+RQ+ + R++N   R R D   EH   + PLLIF G +P ++ GNGGL  
Sbjct: 64   FGLMEAFSAFMRQRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGLEA 123

Query: 721  FLNEALG--FRRENGGDYFVGPGVEEFFEHLSTGDQPVPPPASRSSIDALPSIKISKKDV 548
              + + G  F R N GDYFVGPG+EE FE LS  D+  PPPA+RSSIDA+P+IKI++K +
Sbjct: 124  LFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAMPTIKITQKHL 183

Query: 547  RSDAHCPVCKEKFELGSQAMKLPCKHLYHSDCIVPWLEQRSSCPVCRHELTPE-QXXXXX 371
            RSD+HCPVCK+KFELGS+A ++PC HLYHSDCIVPWL Q +SCPVCR EL P+       
Sbjct: 184  RSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSGHS 243

Query: 370  XXXXXXXXXXXXXXXXXXXXXXXXRPWSFLWPFRSPRSRPQDHGTAETSSVTNHQDNNYS 191
                                     P S+LWPFRS  S      T  +SS T H++N+  
Sbjct: 244  YQSSSSRSRSSNYSGRENSREGRRNPLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQM 303

Query: 190  EYSYWPF 170
             YS WPF
Sbjct: 304  GYSGWPF 310


>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  281 bits (720), Expect = 2e-73
 Identities = 144/307 (46%), Positives = 189/307 (61%), Gaps = 15/307 (4%)
 Frame = -2

Query: 1045 MMSDRNTHWCYTCRQPVEIRRQNAVCFNCYGGFVQELDEMLTVNL---------EEQNHR 893
            M S RNTHWCY+CR+PV +R +++ C  C GGFVQELD+M  ++          ++++ R
Sbjct: 1    MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSDDDRDQR 60

Query: 892  PRFIEAVSNFLRQQTSVRTNN---RGRFDLGTEHGSIWNPLLIFSGDMPVQMPGNGGLVE 722
               +EA S+F+RQ+ + R++N   R R D    H   + PLLIF G +P ++ GNGG   
Sbjct: 61   FGLMEAFSDFMRQRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGFEA 120

Query: 721  FLNEALG--FRRENGGDYFVGPGVEEFFEHLSTGDQPVPPPASRSSIDALPSIKISKKDV 548
              + A G  F R N GDYF+GPG+EE FE LS  DQ  PPPA+RSSIDA+P+IKI++K +
Sbjct: 121  LFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPTIKITQKHL 180

Query: 547  RSDAHCPVCKEKFELGSQAMKLPCKHLYHSDCIVPWLEQRSSCPVCRHELTPE-QXXXXX 371
            RSD+HCPVCK+KFELGS+A ++PC HLYHSDCIVPWL Q +SCPVCR EL P+       
Sbjct: 181  RSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSRHS 240

Query: 370  XXXXXXXXXXXXXXXXXXXXXXXXRPWSFLWPFRSPRSRPQDHGTAETSSVTNHQDNNYS 191
                                     P S+LWPFRS  S      T E+SS   H++N + 
Sbjct: 241  YQSSSSRSRSSNYSGRENSRGGRRNPLSYLWPFRSSNSSSNHDETPESSSPAMHENNPHM 300

Query: 190  EYSYWPF 170
             YS WPF
Sbjct: 301  GYSGWPF 307


>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449529445|ref|XP_004171710.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 305

 Score =  274 bits (700), Expect = 4e-71
 Identities = 137/305 (44%), Positives = 181/305 (59%), Gaps = 13/305 (4%)
 Frame = -2

Query: 1042 MSDRNTHWCYTCRQPVEIRRQNAVCFNCYGGFVQELDEML---------TVNLEEQNHRP 890
            MS  NTHWCY C QPV +R ++  C +C GGFVQELDEM+             E QN R 
Sbjct: 1    MSTANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 889  RFIEAVSNFLRQQTSVRTNNRGRFDLGTEHGSIWNPLLIFSGDMPVQMPGNGGLVEFLN- 713
              +E  SNF+RQ+   R + RGR D   +HG  + P LIF G +PV++ G+GG   F N 
Sbjct: 61   GLLELFSNFMRQRLVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNG 120

Query: 712  -EALGFRRENGGDYFVGPGVEEFFEHLSTGDQPVPPPASRSSIDALPSIKISKKDVRSDA 536
               +G  R NGGDYF+GPG+EE FE LS  D+  PPPASRSSIDA+P +KI+++ +RS++
Sbjct: 121  VPGIGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS 180

Query: 535  HCPVCKEKFELGSQAMKLPCKHLYHSDCIVPWLEQRSSCPVCRHELTPE-QXXXXXXXXX 359
            HCPVC++KFELGS+A ++PC H+YHSDCIVPWL Q +SCPVCR EL  +           
Sbjct: 181  HCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSSSGS 240

Query: 358  XXXXXXXXXXXXXXXXXXXXRPWSFLWPFRSPRSRPQDHGTAETSSVTNHQDNNY-SEYS 182
                                 P++ LWPFR+  S      T  ++S   H+ N + + Y 
Sbjct: 241  NNSSRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQHETGYY 300

Query: 181  YWPFE 167
             WPF+
Sbjct: 301  GWPFD 305


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  272 bits (696), Expect = 1e-70
 Identities = 140/310 (45%), Positives = 190/310 (61%), Gaps = 17/310 (5%)
 Frame = -2

Query: 1045 MMSDRNTHWCYTCRQPVEIRRQNAVCFNCYGGFVQELDEMLTVNL---------EEQNHR 893
            M + RNTHWCY+CR+PV + R++AVC +C  GFV EL++M+ VN          EE++ R
Sbjct: 1    MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60

Query: 892  PRFIEAVSNFLRQQTSVRTNN---RGRFDLGTEHGSIWNPLLIFSGDMPVQMPGNGGLVE 722
               +E  S F+R Q + R  +   R + D   EH + + PLLIF G +P ++ G+GG   
Sbjct: 61   LGLMETFSAFMRHQMADRGRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA 120

Query: 721  FLNEA--LGFRRENGGDYFVGPGVEEFFEHLSTGDQPVPPPASRSSIDALPSIKISKKDV 548
              N A  +G  R N GDYF+GPG+EE FE LS  ++  PPPASRSSIDA+P+IKI+++ +
Sbjct: 121  LFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANNRQGPPPASRSSIDAMPTIKITQRHL 180

Query: 547  RSDAHCPVCKEKFELGSQAMKLPCKHLYHSDCIVPWLEQRSSCPVCRHELTPEQXXXXXX 368
            RSD+HCPVCK+KFE+GS+A ++PC HLYHSDCIVPWL Q +SCPVCR EL P Q      
Sbjct: 181  RSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELLP-QGLSSSN 239

Query: 367  XXXXXXXXXXXXXXXXXXXXXXXRPWSFLWPFRSPRSRPQDHGTAETS---SVTNHQDNN 197
                                    P+SFLWPFRS  S   D  T  +S   ++  +  ++
Sbjct: 240  RSTNGRSRSASLSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSSPTPTIPENSHHH 299

Query: 196  YSEYSYWPFE 167
            ++ YS WPFE
Sbjct: 300  HAGYSGWPFE 309


>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Glycine
            max] gi|356577674|ref|XP_003556949.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like isoform 2 [Glycine
            max]
          Length = 309

 Score =  261 bits (667), Expect = 3e-67
 Identities = 137/310 (44%), Positives = 185/310 (59%), Gaps = 17/310 (5%)
 Frame = -2

Query: 1045 MMSDRNTHWCYTCRQPVEIRRQNAVCFNCYGGFVQELDEMLTVNL---------EEQNHR 893
            M + RNTHWCY+CR+PV + R++ VC +C  GFV EL++++ VN          EE++ R
Sbjct: 1    MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNLGFVHELNDIVHVNPFDLFGMDNNEERDQR 60

Query: 892  PRFIEAVSNFLRQQTSVRTNN---RGRFDLGTEHGSIWNPLLIFSGDMPVQMPGNGGLVE 722
               +E  S F+R Q + R  +   R R D   EH + + PLLIF G +P ++  +GG   
Sbjct: 61   LGLMETFSAFMRHQMADRGRSHDIRVRTDSNPEHSASFAPLLIFGGHIPFRLSRHGGFEA 120

Query: 721  FLNEA--LGFRRENGGDYFVGPGVEEFFEHLSTGDQPVPPPASRSSIDALPSIKISKKDV 548
              N A  +G  + N GDYF+GPG+EE FE LS  ++  P PASRSSIDA+P+IKI ++ +
Sbjct: 121  LFNGAPGIGLTQGNTGDYFIGPGLEELFEQLSANNRQGPLPASRSSIDAMPTIKIVQRHL 180

Query: 547  RSDAHCPVCKEKFELGSQAMKLPCKHLYHSDCIVPWLEQRSSCPVCRHELTPEQXXXXXX 368
            RSD+HCPVCK+KFELGS+A ++PC HLYHSDCIVPWL Q +SCPVCR EL P Q      
Sbjct: 181  RSDSHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPP-QGLSSSN 239

Query: 367  XXXXXXXXXXXXXXXXXXXXXXXRPWSFLWPFRSPRSRPQDHGTAE---TSSVTNHQDNN 197
                                    P+SFLWPFRS  S   D  T     T ++  +  ++
Sbjct: 240  GGANGRSRSARVSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSTPTPTIPENSHHH 299

Query: 196  YSEYSYWPFE 167
            ++ YS WPFE
Sbjct: 300  HAGYSGWPFE 309


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