BLASTX nr result

ID: Cephaelis21_contig00002883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002883
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]                   201   2e-49
gb|AAT08172.1| Hin19 [Nicotiana tabacum]                              199   1e-48
ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glyci...   191   3e-46
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   190   3e-46
ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820...   189   8e-46

>emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
          Length = 275

 Score =  201 bits (512), Expect = 2e-49
 Identities = 118/210 (56%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
 Frame = +2

Query: 2   SFRRTRNLPWQNG--LFEDSLKAARL-SGLDSGTKLFVSNLDVGVTSEDIRELFSEIGEL 172
           SFRRT+NLPWQNG  LFEDSL+AA + SGL+SGTK++VSNLDVGVT+ DIRELFSEIGEL
Sbjct: 64  SFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIRELFSEIGEL 123

Query: 173 IRYAIHYDKNGRPSGSAEVLFARRSDAVQALRRYNNVQLDGKPMKIEIVGTNSEVPVSAX 352
           IRYAIHYDKNGRPSG+AEV+FARRSDA QAL+RYNNVQLDGKPMKIE+V   +++P+SA 
Sbjct: 124 IRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVAPPTDMPLSAR 183

Query: 353 XXXXXXXXXXXXXXMAPGPGSTRG-PTVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 529
                         M   PGS RG  +                                 
Sbjct: 184 VDVGRGNGRRTVVMM---PGSARGRGSASAANRGSSQRGRGGFGTTSGRGRSRGRGGGRG 240

Query: 530 XXXXXXWRKKGVDKSADELDKELEAYHAGA 619
                  RK GV+KSA+ELDKELE Y A A
Sbjct: 241 RGRGGRGRKNGVEKSAEELDKELENYRATA 270


>gb|AAT08172.1| Hin19 [Nicotiana tabacum]
          Length = 219

 Score =  199 bits (505), Expect = 1e-48
 Identities = 115/209 (55%), Positives = 133/209 (63%), Gaps = 3/209 (1%)
 Frame = +2

Query: 2   SFRRTRNLPWQNG--LFEDSLKAARLS-GLDSGTKLFVSNLDVGVTSEDIRELFSEIGEL 172
           S RRT+NLPWQNG  LFEDSL+AA +S GL+SGTK++VSNLDVGVT+ DIRELFSEIGEL
Sbjct: 7   SSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDVGVTNSDIRELFSEIGEL 66

Query: 173 IRYAIHYDKNGRPSGSAEVLFARRSDAVQALRRYNNVQLDGKPMKIEIVGTNSEVPVSAX 352
           IRYAIHYDKNGRPSG+AEV+FARRSDA QA +RYNNVQLDGKPMKIE+V  ++ +P+SA 
Sbjct: 67  IRYAIHYDKNGRPSGAAEVVFARRSDAYQAHKRYNNVQLDGKPMKIEVVAPSTGMPLSAR 126

Query: 353 XXXXXXXXXXXXXXMAPGPGSTRGPTVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 532
                         + PG    RG                                    
Sbjct: 127 VDVGRGSGRRTVVTL-PGSARGRGAASAAANRGSSQRGRGGFGNASGRWRNRGRGGGRGR 185

Query: 533 XXXXXWRKKGVDKSADELDKELEAYHAGA 619
                 RK GV+KSA+ELDKELE YHA A
Sbjct: 186 GRGGRVRKNGVEKSAEELDKELEKYHATA 214


>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
          Length = 298

 Score =  191 bits (484), Expect = 3e-46
 Identities = 110/211 (52%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
 Frame = +2

Query: 2   SFRRTRNLPWQNGLFEDSLKAARLSGLDSGTKLFVSNLDVGVTSEDIRELFSEIGELIRY 181
           S RR R  PWQ+ LFEDSL+AA + G++ GTKL+VSNLD GVT+EDIRELFSE+GEL R+
Sbjct: 85  SIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRF 144

Query: 182 AIHYDKNGRPSGSAEVLFARRSDAVQALRRYNNVQLDGKPMKIEIVGTNSEVPVSA-XXX 358
           A+HYDKNG PSGSAEV++ RRSDA  AL+RYNNV LDGKPMKIEIVG+NSE+P+SA    
Sbjct: 145 AVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNV 204

Query: 359 XXXXXXXXXXXXMAPGPGST-RGPTVGN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 529
                       M P  G    GPT+ N                                
Sbjct: 205 TGVNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRRGGPRSGSGRGGGGGRGRGRGSRGG 264

Query: 530 XXXXXXWRKKGVDKSADELDKELEAYHAGAM 622
                  RK  V+KSA+ELDKELE YHA AM
Sbjct: 265 GGGRGRGRKDAVEKSAEELDKELETYHAEAM 295


>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  190 bits (483), Expect = 3e-46
 Identities = 108/211 (51%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
 Frame = +2

Query: 2   SFRRTRNLPWQNGLFEDSLKAARLSGLDSGTKLFVSNLDVGVTSEDIRELFSEIGELIRY 181
           S RRT+ +PWQ+ LFEDSL+AA L GL++GTKL++SNLD GVT+EDIRELFSEIG++ RY
Sbjct: 67  SSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRY 125

Query: 182 AIHYDKNGRPSGSAEVLFARRSDAVQALRRYNNVQLDGKPMKIEIVGTNSEVPVSA--XX 355
           A+HY+KNGRPSGSAEV++ RRSDA  A++RYNNV LDGKPMKIEI+G++S++PVSA    
Sbjct: 126 AVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVNV 185

Query: 356 XXXXXXXXXXXXXMAPGPGSTRGPTVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 535
                        M PG G  RG T  N                                
Sbjct: 186 IGGVNGKRRRTVVMTPGVGHARGSTAINRSSSRRGRGGLSNGRGRGRAGSRGRGRGRG-- 243

Query: 536 XXXXWRKKGVDKSADELDKELEAYHAGAMES 628
                RK+ V+KSA ELDKEL+ YHA AM +
Sbjct: 244 -----RKQPVEKSAVELDKELDNYHAEAMHT 269


>ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
          Length = 298

 Score =  189 bits (480), Expect = 8e-46
 Identities = 108/212 (50%), Positives = 127/212 (59%), Gaps = 5/212 (2%)
 Frame = +2

Query: 2   SFRRTRNLPWQNGLFEDSLKAARLSGLDSGTKLFVSNLDVGVTSEDIRELFSEIGELIRY 181
           S RR R  PWQ+ LFEDSL+AA + G++ GTKL+VSNLD GVT+EDIRELFSE+GEL R+
Sbjct: 86  SIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRF 145

Query: 182 AIHYDKNGRPSGSAEVLFARRSDAVQALRRYNNVQLDGKPMKIEIVGTNSEVPVSAXXXX 361
           A+HYDKNG PSGSAEV++ RRSDA  AL+RYNNV LDGKPMKIEIVG+NSE+P+SA    
Sbjct: 146 AVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNV 205

Query: 362 XXXXXXXXXXXMAPGPGSTRG-----PTVGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 526
                      +    G   G     PT G                              
Sbjct: 206 TGVNGRRKRTVVMTSRGGQAGGGPAMPTRG--AGWGRRGGPRSGSGRGGAGGRGRGRGRG 263

Query: 527 XXXXXXXWRKKGVDKSADELDKELEAYHAGAM 622
                   RK  V+KSA+ELDKELE YHA AM
Sbjct: 264 GAGGRGRGRKDAVEKSAEELDKELETYHAEAM 295


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