BLASTX nr result

ID: Cephaelis21_contig00002846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002846
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   178   5e-43
ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...   171   7e-41
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...   171   7e-41
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   171   7e-41
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   170   1e-40

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/89 (91%), Positives = 88/89 (98%)
 Frame = -1

Query: 267 RYGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGEGTFGLVDYTNYEDM 88
           R+GISRHS++RVI+RGLPSSASWQDLKDHMRKAGDVCFAEVSRD EGTFGLVDYTNYEDM
Sbjct: 108 RHGISRHSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDM 167

Query: 87  KYAIRKLDDSEFRNPWTKTYIRVKEYKGS 1
           KYAIRKLDD+EFRNPWT+TYIRV+EYKGS
Sbjct: 168 KYAIRKLDDTEFRNPWTRTYIRVREYKGS 196


>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
           gi|355491414|gb|AES72617.1| RNA-binding protein
           [Medicago truncatula]
          Length = 273

 Score =  171 bits (432), Expect = 7e-41
 Identities = 77/89 (86%), Positives = 86/89 (96%)
 Frame = -1

Query: 267 RYGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGEGTFGLVDYTNYEDM 88
           R+G+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD EGTFGLVDYTNY+DM
Sbjct: 114 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 173

Query: 87  KYAIRKLDDSEFRNPWTKTYIRVKEYKGS 1
           KYAIRKLDD+EFRNPW ++YIRV++Y+ S
Sbjct: 174 KYAIRKLDDTEFRNPWARSYIRVRKYESS 202


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
           gi|355491413|gb|AES72616.1| RNA-binding protein
           [Medicago truncatula]
          Length = 272

 Score =  171 bits (432), Expect = 7e-41
 Identities = 77/89 (86%), Positives = 86/89 (96%)
 Frame = -1

Query: 267 RYGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGEGTFGLVDYTNYEDM 88
           R+G+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD EGTFGLVDYTNY+DM
Sbjct: 114 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 173

Query: 87  KYAIRKLDDSEFRNPWTKTYIRVKEYKGS 1
           KYAIRKLDD+EFRNPW ++YIRV++Y+ S
Sbjct: 174 KYAIRKLDDTEFRNPWARSYIRVRKYESS 202


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score =  171 bits (432), Expect = 7e-41
 Identities = 77/89 (86%), Positives = 86/89 (96%)
 Frame = -1

Query: 267 RYGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGEGTFGLVDYTNYEDM 88
           R+G+SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD EGTFGLVDYTNY+DM
Sbjct: 221 RFGVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDM 280

Query: 87  KYAIRKLDDSEFRNPWTKTYIRVKEYKGS 1
           KYAIRKLDD+EFRNPW ++YIRV++Y+ S
Sbjct: 281 KYAIRKLDDTEFRNPWARSYIRVRKYESS 309


>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 263

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/89 (86%), Positives = 85/89 (95%)
 Frame = -1

Query: 267 RYGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDGEGTFGLVDYTNYEDM 88
           R+GISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRD EGTFG+VDYTNY+DM
Sbjct: 113 RFGISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDM 172

Query: 87  KYAIRKLDDSEFRNPWTKTYIRVKEYKGS 1
           KYAIRKLDD+EFRNPW + YIRV++Y+ S
Sbjct: 173 KYAIRKLDDTEFRNPWARAYIRVRKYESS 201


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