BLASTX nr result

ID: Cephaelis21_contig00002793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002793
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    59   2e-16
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...    59   2e-16
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-16
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...    59   5e-16
emb|CBI16387.3| unnamed protein product [Vitis vinifera]               59   5e-16

>ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
           RBP47B'-like [Cucumis sativus]
          Length = 427

 Score = 58.5 bits (140), Expect(2) = 2e-16
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 476 VVWNKITG*PKGFGFIEFTSHAIYKRILQSQNGTQL-----NFRLKWEFLGV 616
           ++ NKITG P+G+GF+EF SHA  +RILQ+ NGTQ+      FRL W   G+
Sbjct: 51  IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102



 Score = 54.7 bits (130), Expect(2) = 2e-16
 Identities = 34/64 (53%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
 Frame = +1

Query: 607 FGSRER*PDAGHEHYIFVGDSTLGVTDLV----------SVRVAKIFSDPNTG*PKE*DF 756
           FG  ER PDAG EH IFVGD    VTD +          SVR AK+ +DPNTG  K   F
Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 757 VKFA 768
           VKFA
Sbjct: 160 VKFA 163


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
           sativus]
          Length = 422

 Score = 58.5 bits (140), Expect(2) = 2e-16
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 476 VVWNKITG*PKGFGFIEFTSHAIYKRILQSQNGTQL-----NFRLKWEFLGV 616
           ++ NKITG P+G+GF+EF SHA  +RILQ+ NGTQ+      FRL W   G+
Sbjct: 51  IIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102



 Score = 54.7 bits (130), Expect(2) = 2e-16
 Identities = 34/64 (53%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
 Frame = +1

Query: 607 FGSRER*PDAGHEHYIFVGDSTLGVTDLV----------SVRVAKIFSDPNTG*PKE*DF 756
           FG  ER PDAG EH IFVGD    VTD +          SVR AK+ +DPNTG  K   F
Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 757 VKFA 768
           VKFA
Sbjct: 160 VKFA 163


>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 57.8 bits (138), Expect(2) = 4e-16
 Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 476 VVWNKITG*PKGFGFIEFTSHAIYKRILQSQNGTQL-----NFRLKWEFLGV 616
           ++ NK+TG P+G+GF+EF SHA  +RILQ+ NGTQ+      FRL W   G+
Sbjct: 51  IIRNKLTGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGI 102



 Score = 54.7 bits (130), Expect(2) = 4e-16
 Identities = 34/64 (53%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
 Frame = +1

Query: 607 FGSRER*PDAGHEHYIFVGDSTLGVTDLV----------SVRVAKIFSDPNTG*PKE*DF 756
           FG  ER PDAG EH IFVGD    VTD +          SVR AK+ +DPNTG  K   F
Sbjct: 100 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGF 159

Query: 757 VKFA 768
           VKFA
Sbjct: 160 VKFA 163


>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 447

 Score = 58.5 bits (140), Expect(2) = 5e-16
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 476 VVWNKITG*PKGFGFIEFTSHAIYKRILQSQNGTQL-----NFRLKWEFLGV 616
           ++ NKITG P+G+GF+EF SHA  +RILQ+ NGTQ+      FRL W   G+
Sbjct: 72  IIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGI 123



 Score = 53.5 bits (127), Expect(2) = 5e-16
 Identities = 33/64 (51%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
 Frame = +1

Query: 607 FGSRER*PDAGHEHYIFVGDSTLGVTDLV----------SVRVAKIFSDPNTG*PKE*DF 756
           FG  ER PDAG EH IFVGD    VTD +          SVR AK+ +DPNTG  K   F
Sbjct: 121 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGF 180

Query: 757 VKFA 768
           VKF+
Sbjct: 181 VKFS 184


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 58.5 bits (140), Expect(2) = 5e-16
 Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
 Frame = +2

Query: 476 VVWNKITG*PKGFGFIEFTSHAIYKRILQSQNGTQL-----NFRLKWEFLGV 616
           ++ NKITG P+G+GF+EF SHA  +RILQ+ NGTQ+      FRL W   G+
Sbjct: 72  IIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGI 123



 Score = 53.5 bits (127), Expect(2) = 5e-16
 Identities = 33/64 (51%), Positives = 37/64 (57%), Gaps = 10/64 (15%)
 Frame = +1

Query: 607 FGSRER*PDAGHEHYIFVGDSTLGVTDLV----------SVRVAKIFSDPNTG*PKE*DF 756
           FG  ER PDAG EH IFVGD    VTD +          SVR AK+ +DPNTG  K   F
Sbjct: 121 FGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGF 180

Query: 757 VKFA 768
           VKF+
Sbjct: 181 VKFS 184


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