BLASTX nr result

ID: Cephaelis21_contig00002755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002755
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   115   6e-24
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   113   2e-23
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...   112   4e-23
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...   112   4e-23
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               112   5e-23

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  115 bits (287), Expect = 6e-24
 Identities = 50/125 (40%), Positives = 76/125 (60%)
 Frame = -3

Query: 378  NILSTCTNIIYAIYNFPNKLLS*ISSLMAKFWWQADESHRKIHWIAWKNLTESRDHGGLS 199
            +++      +  +Y FP  ++  I S MA+FWW + ++ RKIHW  W ++   +  GG+ 
Sbjct: 799  SVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMG 858

Query: 198  FKDLRAFNDSLIAKQLWRVSTKPNLLMSRVMKAKYFPTSSLLEAKPRHNSSWIWKSWLGS 19
            FKDL  FND+L+ +Q WR++ +P  L+ RVMKAKYFP    L A   H+SS+ W S   S
Sbjct: 859  FKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSSIWSS 918

Query: 18   KYVLE 4
            K +L+
Sbjct: 919  KALLK 923


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  113 bits (282), Expect = 2e-23
 Identities = 49/113 (43%), Positives = 78/113 (69%)
 Frame = -3

Query: 345  AIYNFPNKLLS*ISSLMAKFWWQADESHRKIHWIAWKNLTESRDHGGLSFKDLRAFNDSL 166
            ++++ P+ L+  I SL+A+FWW + +++RK+HW +W  L   +  GGL F+DL  FN SL
Sbjct: 809  SVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSL 868

Query: 165  IAKQLWRVSTKPNLLMSRVMKAKYFPTSSLLEAKPRHNSSWIWKSWLGSKYVL 7
            +AKQ WR+ T    L+ R+++A+YF +S LLEA+  +N S+ W+S  GSK +L
Sbjct: 869  LAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLL 921


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  112 bits (280), Expect = 4e-23
 Identities = 46/107 (42%), Positives = 71/107 (66%)
 Frame = -3

Query: 345 AIYNFPNKLLS*ISSLMAKFWWQADESHRKIHWIAWKNLTESRDHGGLSFKDLRAFNDSL 166
           +++  P K+   IS  +A+FWW  DE+HR+IHW AW  +   +  GGL F+DL  FN ++
Sbjct: 624 SVFRIPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAM 683

Query: 165 IAKQLWRVSTKPNLLMSRVMKAKYFPTSSLLEAKPRHNSSWIWKSWL 25
           +AKQ+WR    P+ L +RVM+ KY+P  ++L A+P+  SS+ W+S L
Sbjct: 684 LAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQSIL 730


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score =  112 bits (280), Expect = 4e-23
 Identities = 46/107 (42%), Positives = 71/107 (66%)
 Frame = -3

Query: 345 AIYNFPNKLLS*ISSLMAKFWWQADESHRKIHWIAWKNLTESRDHGGLSFKDLRAFNDSL 166
           +++  P K+   IS  +A+FWW  DE+HR+IHW AW  +   +  GGL F+DL  FN ++
Sbjct: 624 SVFRIPKKICDCISEAIARFWWGDDENHRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAM 683

Query: 165 IAKQLWRVSTKPNLLMSRVMKAKYFPTSSLLEAKPRHNSSWIWKSWL 25
           +AKQ+WR    P+ L +RVM+ KY+P  ++L A+P+  SS+ W+S L
Sbjct: 684 LAKQIWRFLCDPDSLCARVMRCKYYPDGNILRARPKKGSSYAWQSIL 730


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  112 bits (279), Expect = 5e-23
 Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 10/125 (8%)
 Frame = -3

Query: 351 IYAI--YNFPNKLLS*ISSLMAKFWWQADESHRKIHWIAWKNLTESRDHGGLSFKDLRAF 178
           +YA+  +  P  ++S I SL+  FWW+   + R I W+AWK L  S+  GGL F+DL  F
Sbjct: 423 VYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQYSKKEGGLGFRDLAKF 482

Query: 177 NDSLIAKQLWRVSTKPNLLMSRVMKAKYFPTSSLLEAKPRHNSSWIWKSWL--------G 22
           ND+L+AKQ WR+   PN L +RVMKA+YF  +S+++AK R   S+ W S L        G
Sbjct: 483 NDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALLRKG 542

Query: 21  SKYVL 7
           ++YV+
Sbjct: 543 TRYVI 547


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