BLASTX nr result

ID: Cephaelis21_contig00002706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002706
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica pa...   111   5e-22
gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Goss...   111   5e-22
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola...   111   6e-22
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...   110   8e-22
ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochond...   109   2e-21

>ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya]
           gi|170522372|gb|ACB20482.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Carica papaya]
          Length = 108

 Score =  111 bits (278), Expect = 5e-22
 Identities = 51/92 (55%), Positives = 67/92 (72%)
 Frame = +2

Query: 404 RPLSPHLAIYQPQTNSTASIVNRITGIYLTTAVLAPYFLCMKVGTVAFTYDYVYQLLFYS 583
           RPLSPHL IY+PQ  ST  I +RI+G +L T VL  Y  C+K+G + FTY+  YQ  FYS
Sbjct: 5   RPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLFCLKIGFICFTYENFYQFFFYS 64

Query: 584 SQLVPLSAELAALALGYHVYKGIGHLVADVTG 679
           S+L+ +SAE+AALAL YH+Y G+ HL+ D +G
Sbjct: 65  SKLILISAEIAALALSYHLYNGVRHLLTDFSG 96


>gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum]
          Length = 201

 Score =  111 bits (278), Expect = 5e-22
 Identities = 49/94 (52%), Positives = 71/94 (75%)
 Frame = +2

Query: 404 RPLSPHLAIYQPQTNSTASIVNRITGIYLTTAVLAPYFLCMKVGTVAFTYDYVYQLLFYS 583
           RPLSPHL IY+PQ ++T SI NRI+G++LTTA+L  Y L +K+G++ FTY   YQ  FYS
Sbjct: 107 RPLSPHLPIYKPQLSATLSITNRISGVFLTTALLFSYLLSLKMGSICFTYSNFYQFFFYS 166

Query: 584 SQLVPLSAELAALALGYHVYKGIGHLVADVTGSV 685
           ++L P++  +AALA+ YH+  G+ HL+AD +G +
Sbjct: 167 AKLAPVTVSIAALAVSYHLCYGVRHLLADFSGKL 200


>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
           gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score =  111 bits (277), Expect = 6e-22
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = +2

Query: 404 RPLSPHLAIYQPQTNSTASIVNRITGIYLTTAVLAPYFLCMKVGTVAFTYDYVYQLLFYS 583
           RPLSPHL IY+PQ  ST SI +RI+G +L T V   Y LC+K+G + FTY+  YQ  FYS
Sbjct: 5   RPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFFYS 64

Query: 584 SQLVPLSAELAALALGYHVYKGIGHLVADVTG 679
           S+L+ +S E+ ALAL YH+Y G+ HL+ D +G
Sbjct: 65  SKLILISVEITALALSYHLYNGVRHLLTDFSG 96


>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score =  110 bits (276), Expect = 8e-22
 Identities = 50/92 (54%), Positives = 66/92 (71%)
 Frame = +2

Query: 404 RPLSPHLAIYQPQTNSTASIVNRITGIYLTTAVLAPYFLCMKVGTVAFTYDYVYQLLFYS 583
           RPLSPHL IY+PQ  ST SI +RI+G +L T V   Y LC+K+G + FTY+  YQ  FYS
Sbjct: 5   RPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFFYS 64

Query: 584 SQLVPLSAELAALALGYHVYKGIGHLVADVTG 679
           S+L+ +S E+ ALAL YH+Y G+ HL+ D +G
Sbjct: 65  SKLILISVEITALALSYHLYNGVRHLLTDFSG 96


>ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus] gi|340007673|gb|AEK26537.1| succinate
           dehydrogenase subunit 3 (mitochondrion) [Mimulus
           guttatus]
          Length = 111

 Score =  109 bits (272), Expect = 2e-21
 Identities = 49/92 (53%), Positives = 67/92 (72%)
 Frame = +2

Query: 404 RPLSPHLAIYQPQTNSTASIVNRITGIYLTTAVLAPYFLCMKVGTVAFTYDYVYQLLFYS 583
           RPLSPHL IY+PQ  ST  I +RI+G +L T +   Y LC+K+G + FTY+ V QL+FYS
Sbjct: 13  RPLSPHLPIYKPQLTSTFPISHRISGAFLATILFFFYLLCLKIGLICFTYENVCQLIFYS 72

Query: 584 SQLVPLSAELAALALGYHVYKGIGHLVADVTG 679
           S+L+ +S E+ ALAL YH+Y G+ HL+ D +G
Sbjct: 73  SKLILISVEITALALSYHIYNGVRHLLTDFSG 104


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