BLASTX nr result

ID: Cephaelis21_contig00002593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002593
         (2258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, ...    75   3e-12
emb|CBI19306.3| unnamed protein product [Vitis vinifera]               75   3e-12
ref|NP_001237491.1| serine hydroxymethyltransferase 3 [Glycine m...    74   3e-12
ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago tr...    73   5e-12
ref|XP_003612955.1| Serine hydroxymethyltransferase [Medicago tr...    73   5e-12

>ref|XP_002285605.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 516

 Score = 75.1 bits (183), Expect(2) = 3e-12
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -2

Query: 2239 LGSSTHSVPGDVSVMVPGGIRMGTPVLTSKGFTEEDFVKVAELFD 2105
            + ++ ++VPGDVS MVPGGIRMGTP LTS+GF EEDFVKVAELFD
Sbjct: 409  IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAELFD 453



 Score = 25.0 bits (53), Expect(2) = 3e-12
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -3

Query: 2256 SRVEKVLEAVHI 2221
            SRVEKVLE+VHI
Sbjct: 398  SRVEKVLESVHI 409



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -3

Query: 1956 GPKLKDCVETMKY-ATLQSEIAKLRHEVEEYAKQFPTIGFKKEAMKYKD 1813
            G KLKD V TM+  A  QSEIAKLRHEVEEYAKQFPTIGF+KE MKYKD
Sbjct: 468  GTKLKDFVATMQSDAETQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKD 516


>emb|CBI19306.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 75.1 bits (183), Expect(2) = 3e-12
 Identities = 34/45 (75%), Positives = 40/45 (88%)
 Frame = -2

Query: 2239 LGSSTHSVPGDVSVMVPGGIRMGTPVLTSKGFTEEDFVKVAELFD 2105
            + ++ ++VPGDVS MVPGGIRMGTP LTS+GF EEDFVKVAELFD
Sbjct: 407  IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAELFD 451



 Score = 25.0 bits (53), Expect(2) = 3e-12
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -3

Query: 2256 SRVEKVLEAVHI 2221
            SRVEKVLE+VHI
Sbjct: 396  SRVEKVLESVHI 407



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -3

Query: 1956 GPKLKDCVETMKY-ATLQSEIAKLRHEVEEYAKQFPTIGFKKEAMKYKD 1813
            G KLKD V TM+  A  QSEIAKLRHEVEEYAKQFPTIGF+KE MKYKD
Sbjct: 466  GTKLKDFVATMQSDAETQSEIAKLRHEVEEYAKQFPTIGFEKETMKYKD 514


>ref|NP_001237491.1| serine hydroxymethyltransferase 3 [Glycine max]
            gi|222142533|gb|ACM45953.1| serine
            hydroxymethyltransferase 3 [Glycine max]
          Length = 516

 Score = 73.6 bits (179), Expect(2) = 3e-12
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -2

Query: 2239 LGSSTHSVPGDVSVMVPGGIRMGTPVLTSKGFTEEDFVKVAELFD 2105
            + ++ ++VPGDVS MVPGGIRMGTP LTS+GF EEDFVKVAE FD
Sbjct: 409  IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEFFD 453



 Score = 26.2 bits (56), Expect(2) = 3e-12
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 2256 SRVEKVLEAVHI 2221
            SRVEKVLEAVHI
Sbjct: 398  SRVEKVLEAVHI 409



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
 Frame = -3

Query: 1956 GPKLKDCVETMKYA-TLQSEIAKLRHEVEEYAKQFPTIGFKKEAMKYKD 1813
            G KLKD + T++ + T QSEIAKLR +VEEYAKQFPTIGF K  MK+K+
Sbjct: 468  GTKLKDFLATIESSSTFQSEIAKLRLDVEEYAKQFPTIGFDKATMKHKN 516


>ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago truncatula]
            gi|163889372|gb|ABY48142.1|
            serine-hydroxymethyltransferase [Medicago truncatula]
            gi|355514289|gb|AES95912.1| Serine
            hydroxymethyltransferase [Medicago truncatula]
          Length = 518

 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -2

Query: 2239 LGSSTHSVPGDVSVMVPGGIRMGTPVLTSKGFTEEDFVKVAELFD 2105
            + ++ ++VPGDVS MVPGGIRMGTP LTS+GF EEDFVKVAE FD
Sbjct: 411  IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFD 455



 Score = 26.2 bits (56), Expect(2) = 5e-12
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 2256 SRVEKVLEAVHI 2221
            SRVEKVLEAVHI
Sbjct: 400  SRVEKVLEAVHI 411



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 32/47 (68%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = -3

Query: 1956 GPKLKDCVETMKYAT-LQSEIAKLRHEVEEYAKQFPTIGFKKEAMKY 1819
            G KLKD VET++ ++ +QSEI+KLRH+VEE+AKQFPTIGF+K +MKY
Sbjct: 470  GTKLKDFVETLQSSSYVQSEISKLRHDVEEFAKQFPTIGFEKSSMKY 516


>ref|XP_003612955.1| Serine hydroxymethyltransferase [Medicago truncatula]
            gi|355514290|gb|AES95913.1| Serine
            hydroxymethyltransferase [Medicago truncatula]
          Length = 319

 Score = 73.2 bits (178), Expect(2) = 5e-12
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = -2

Query: 2239 LGSSTHSVPGDVSVMVPGGIRMGTPVLTSKGFTEEDFVKVAELFD 2105
            + ++ ++VPGDVS MVPGGIRMGTP LTS+GF EEDFVKVAE FD
Sbjct: 212  IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFD 256



 Score = 26.2 bits (56), Expect(2) = 5e-12
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = -3

Query: 2256 SRVEKVLEAVHI 2221
            SRVEKVLEAVHI
Sbjct: 201  SRVEKVLEAVHI 212



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 32/47 (68%), Positives = 42/47 (89%), Gaps = 1/47 (2%)
 Frame = -3

Query: 1956 GPKLKDCVETMKYAT-LQSEIAKLRHEVEEYAKQFPTIGFKKEAMKY 1819
            G KLKD VET++ ++ +QSEI+KLRH+VEE+AKQFPTIGF+K +MKY
Sbjct: 271  GTKLKDFVETLQSSSYVQSEISKLRHDVEEFAKQFPTIGFEKSSMKY 317


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