BLASTX nr result

ID: Cephaelis21_contig00002223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00002223
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...   172   9e-41
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   172   1e-40
ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|1...   172   1e-40
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...   171   2e-40
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   171   2e-40

>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score =  172 bits (436), Expect = 9e-41
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = +1

Query: 337 MSGTVEKSSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 516
           MSGT +  S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGTEKSGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 517 GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 609
           GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  172 bits (435), Expect = 1e-40
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = +1

Query: 337 MSGTVEKSSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 516
           MSGT +  S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGTEKAGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 517 GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 609
           GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|118482915|gb|ABK93371.1|
           unknown [Populus trichocarpa]
           gi|222865208|gb|EEF02339.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  172 bits (435), Expect = 1e-40
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = +1

Query: 337 MSGTVEKSSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 516
           MS   EK STTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 517 GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 609
           GQLKNKYGDAFIRGNNVLYISTSKRTLA+GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score =  171 bits (434), Expect = 2e-40
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = +1

Query: 337 MSGTVEKSSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 516
           MSGT +  S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGTGKAGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 517 GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 609
           GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  171 bits (433), Expect = 2e-40
 Identities = 85/91 (93%), Positives = 87/91 (95%)
 Frame = +1

Query: 337 MSGTVEKSSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 516
           MSG  EK S TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 517 GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 609
           GQLKNKYGDAFIRGNNVLYIST+KRTLA+GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTTKRTLADGA 91


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