BLASTX nr result

ID: Cephaelis21_contig00001910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001910
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867438.1| hypothetical protein ARALYDRAFT_491882 [Arab...   102   1e-19
pdb|2O01|E Chain E, The Structure Of A Plant Photosystem I Super...   102   1e-19
gb|AAT72503.1| AT4G28750 [Arabidopsis lyrata subsp. petraea]          102   1e-19
gb|AAG41443.2|AF326861_1 putative photosystem I subunit PSI-E [A...   102   1e-19
gb|AAG40045.1|AF324694_1 AT4g28750 [Arabidopsis thaliana]             102   1e-19

>ref|XP_002867438.1| hypothetical protein ARALYDRAFT_491882 [Arabidopsis lyrata subsp.
           lyrata] gi|297313274|gb|EFH43697.1| hypothetical protein
           ARALYDRAFT_491882 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -3

Query: 299 ILRRESYWFKDVGSVVTVDQDPKTRYPVVVRFSKVNYSNISTNNYALDEIEVVA 138
           ILRRESYWFK+VGSVV VDQDPKTRYPVVVRF+KVNY+NISTNNYALDE+E VA
Sbjct: 89  ILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 142


>pdb|2O01|E Chain E, The Structure Of A Plant Photosystem I Supercomplex At 3.4
           Angstrom Resolution
          Length = 62

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -3

Query: 299 ILRRESYWFKDVGSVVTVDQDPKTRYPVVVRFSKVNYSNISTNNYALDEIEVVA 138
           ILRRESYWFK+VGSVV VDQDPKTRYPVVVRF+KVNY+NISTNNYALDE+E VA
Sbjct: 9   ILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 62


>gb|AAT72503.1| AT4G28750 [Arabidopsis lyrata subsp. petraea]
          Length = 96

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -3

Query: 299 ILRRESYWFKDVGSVVTVDQDPKTRYPVVVRFSKVNYSNISTNNYALDEIEVVA 138
           ILRRESYWFK+VGSVV VDQDPKTRYPVVVRF+KVNY+NISTNNYALDE+E VA
Sbjct: 42  ILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 95


>gb|AAG41443.2|AF326861_1 putative photosystem I subunit PSI-E [Arabidopsis thaliana]
          Length = 115

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -3

Query: 299 ILRRESYWFKDVGSVVTVDQDPKTRYPVVVRFSKVNYSNISTNNYALDEIEVVA 138
           ILRRESYWFK+VGSVV VDQDPKTRYPVVVRF+KVNY+NISTNNYALDE+E VA
Sbjct: 61  ILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 114


>gb|AAG40045.1|AF324694_1 AT4g28750 [Arabidopsis thaliana]
          Length = 110

 Score =  102 bits (254), Expect = 1e-19
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -3

Query: 299 ILRRESYWFKDVGSVVTVDQDPKTRYPVVVRFSKVNYSNISTNNYALDEIEVVA 138
           ILRRESYWFK+VGSVV VDQDPKTRYPVVVRF+KVNY+NISTNNYALDE+E VA
Sbjct: 56  ILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVA 109


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