BLASTX nr result
ID: Cephaelis21_contig00001807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00001807
(1564 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 631 e-178
gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides] 626 e-177
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340... 625 e-176
ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|2... 624 e-176
ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana] gi|7... 624 e-176
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 631 bits (1627), Expect = e-178
Identities = 306/377 (81%), Positives = 336/377 (89%)
Frame = -2
Query: 1392 MASVVMVQPKQPSFSGLKSSVSDFNGVKLAPSVQYKRKVWQQRRXXXXXXXXXXXXXIMG 1213
MA ++M+Q QPSFS L SS+SDFNG KL VQYKRKV+Q + IMG
Sbjct: 1 MAKIMMLQQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMG 60
Query: 1212 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFSSKILHSKGDRQDFE 1033
GTRFIGVFLSRLLVKEGHQVTLFTRGK+P+ +QLPGESD D+ADFSSKILH KGDR+D++
Sbjct: 61 GTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 1032 FVKSSLSAEGFDVVYDINGREAVEVEPIVDALSNLEQYIYCSSAGVYLKSDYLPHFEVDA 853
FVKSSLSAEGFDVVYDINGREA EVEPI+DAL LEQYIYCSSAGVYLKSD LPH EVDA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDA 180
Query: 852 VDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPTP 673
VDPKSRHKGKLETESLL+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 672 GLQVSQLGHVKDLATAFVQVLGNPKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPEII 493
G+Q+SQLGHVKDLATAF+ VLGN KAS+++FNISGEKY+TFDGLA+ACAKA GFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIV 300
Query: 492 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK 313
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 312 AADFSTDDIILSKSLVL 262
ADF+TDD+ILSK LVL
Sbjct: 361 EADFTTDDMILSKKLVL 377
>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 626 bits (1615), Expect = e-177
Identities = 309/378 (81%), Positives = 337/378 (89%), Gaps = 1/378 (0%)
Frame = -2
Query: 1392 MASVVMVQPK-QPSFSGLKSSVSDFNGVKLAPSVQYKRKVWQQRRXXXXXXXXXXXXXIM 1216
MA +V VQ + QPSFS L SS+SDFNG +L VQ KR+VWQ + IM
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIM 60
Query: 1215 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFSSKILHSKGDRQDF 1036
GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+TQQLPGESD DY+DFSSKILH KGDR+DF
Sbjct: 61 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDF 120
Query: 1035 EFVKSSLSAEGFDVVYDINGREAVEVEPIVDALSNLEQYIYCSSAGVYLKSDYLPHFEVD 856
EFVK+SL+A+GFDVVYDINGREAVEVEPI+DAL LEQ+IYCSSAGVYLKSD LPH E D
Sbjct: 121 EFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKD 180
Query: 855 AVDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPT 676
AVDPKSRHKGKLETESLLE+RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 AVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240
Query: 675 PGLQVSQLGHVKDLATAFVQVLGNPKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPEI 496
G+Q++QLGHVKDLA AF+QVLGN KAS+QVFNISGEKYVTFDGLAKACAKAAGFPEPEI
Sbjct: 241 SGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEI 300
Query: 495 IHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 316
+HYNPK+FDFGKKKAFPFRDQHFFAS++KAK VLGW+PEFDLVEGLADSYNLDFGRGT+R
Sbjct: 301 VHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYR 360
Query: 315 KAADFSTDDIILSKSLVL 262
K ADF TDD+IL KSLVL
Sbjct: 361 KEADFFTDDLILGKSLVL 378
>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera] gi|147773479|emb|CAN73432.1| hypothetical
protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 625 bits (1611), Expect = e-176
Identities = 305/378 (80%), Positives = 334/378 (88%)
Frame = -2
Query: 1392 MASVVMVQPKQPSFSGLKSSVSDFNGVKLAPSVQYKRKVWQQRRXXXXXXXXXXXXXIMG 1213
MA +V+ QPSFS L SS+SDFNG++L +Q +RKV Q + +MG
Sbjct: 1 MARLVVQHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTASGEKKILMMG 60
Query: 1212 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFSSKILHSKGDRQDFE 1033
GTRFIGVFL+RLLVKEGHQVTLFTRGKA +TQQLPGESD DYA+FSSK+LH KGDR+DFE
Sbjct: 61 GTRFIGVFLARLLVKEGHQVTLFTRGKAAITQQLPGESDKDYAEFSSKVLHLKGDRKDFE 120
Query: 1032 FVKSSLSAEGFDVVYDINGREAVEVEPIVDALSNLEQYIYCSSAGVYLKSDYLPHFEVDA 853
FVK+SL+AEGFDVVYDINGREAVE+EPI+DAL NL+QYIYCSSAGVY KSD LPH E DA
Sbjct: 121 FVKTSLAAEGFDVVYDINGREAVEIEPILDALPNLQQYIYCSSAGVYKKSDLLPHCETDA 180
Query: 852 VDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPTP 673
VDPKSRHKGKLETESLL++RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 VDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNS 240
Query: 672 GLQVSQLGHVKDLATAFVQVLGNPKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPEII 493
G+Q++QLGHVKDLA AF+ VL N KASKQVFNISGEKYVTFDGLA+ACAK AGFPEPEI+
Sbjct: 241 GIQITQLGHVKDLAKAFLLVLSNEKASKQVFNISGEKYVTFDGLARACAKGAGFPEPEIV 300
Query: 492 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK 313
HYNPKEFDFGKKKAFPFRDQHFFAS+EKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK 360
Query: 312 AADFSTDDIILSKSLVLT 259
ADFSTDDIIL KSLVLT
Sbjct: 361 EADFSTDDIILGKSLVLT 378
>ref|XP_002319474.1| predicted protein [Populus trichocarpa] gi|222857850|gb|EEE95397.1|
predicted protein [Populus trichocarpa]
Length = 380
Score = 624 bits (1610), Expect = e-176
Identities = 308/378 (81%), Positives = 336/378 (88%), Gaps = 1/378 (0%)
Frame = -2
Query: 1392 MASVVMVQPK-QPSFSGLKSSVSDFNGVKLAPSVQYKRKVWQQRRXXXXXXXXXXXXXIM 1216
MA +V VQ + QPSFS L SS+SDFNG +L VQ KR+VWQ + IM
Sbjct: 1 MARLVAVQQQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIM 60
Query: 1215 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFSSKILHSKGDRQDF 1036
GGTRFIGVFLSRLLVKEGHQVTLFTRGKAP+TQ LPGESD DYADFSSKILH KGDR+DF
Sbjct: 61 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDF 120
Query: 1035 EFVKSSLSAEGFDVVYDINGREAVEVEPIVDALSNLEQYIYCSSAGVYLKSDYLPHFEVD 856
EFVK+SL+A+GFDVVYDINGREAVEVEPI+DAL LEQ+IYCSSAGVYLKSD LPH E D
Sbjct: 121 EFVKTSLAAKGFDVVYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKD 180
Query: 855 AVDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPT 676
AVDPKSRHKGKLETESLLE+RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP
Sbjct: 181 AVDPKSRHKGKLETESLLESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPN 240
Query: 675 PGLQVSQLGHVKDLATAFVQVLGNPKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPEI 496
G+Q++QLGHVKDLA AF+QVLGN KAS+QVFNISGEKYVTFDGLAKACAKAAGFPEPEI
Sbjct: 241 SGIQMTQLGHVKDLAKAFIQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEI 300
Query: 495 IHYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFR 316
+HYNPK+FDFGKKKAFPFRDQHFFAS++KAK VLGW+PEFDLVEGLADSYNLDFGRGT+R
Sbjct: 301 VHYNPKDFDFGKKKAFPFRDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYR 360
Query: 315 KAADFSTDDIILSKSLVL 262
K ADF TDD+I+ KSLVL
Sbjct: 361 KEADFFTDDLIIGKSLVL 378
>ref|NP_172405.1| RNA binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1| RNA
binding protein [Arabidopsis thaliana]
Length = 378
Score = 624 bits (1608), Expect = e-176
Identities = 304/377 (80%), Positives = 334/377 (88%)
Frame = -2
Query: 1392 MASVVMVQPKQPSFSGLKSSVSDFNGVKLAPSVQYKRKVWQQRRXXXXXXXXXXXXXIMG 1213
MA ++M+Q QPSFS L SS+SDFNG KL VQYKRKV Q + IMG
Sbjct: 1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60
Query: 1212 GTRFIGVFLSRLLVKEGHQVTLFTRGKAPVTQQLPGESDADYADFSSKILHSKGDRQDFE 1033
GTRFIG+FLSR+LVKEGHQVTLFTRGK+P+ +QLPGESD D+ADFSSKILH KGDR+D++
Sbjct: 61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120
Query: 1032 FVKSSLSAEGFDVVYDINGREAVEVEPIVDALSNLEQYIYCSSAGVYLKSDYLPHFEVDA 853
FVKSSLSAEGFDVVYDINGREA EVEPI++AL LEQYIYCSSAGVYLKSD LPH E DA
Sbjct: 121 FVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDA 180
Query: 852 VDPKSRHKGKLETESLLEARGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPTP 673
VDPKSRHKGKLETESLL+++GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 181 VDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNS 240
Query: 672 GLQVSQLGHVKDLATAFVQVLGNPKASKQVFNISGEKYVTFDGLAKACAKAAGFPEPEII 493
G+Q+SQLGHVKDLATAF+ VLGN KAS+++FNISGEKYVTFDGLAKACAKA GFPEPEI+
Sbjct: 241 GIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIV 300
Query: 492 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRK 313
HYNPKEFDFGKKKAFPFRDQHFFASVEKAK VLGWKPEFDLVEGL DSYNLDFGRGTFRK
Sbjct: 301 HYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRK 360
Query: 312 AADFSTDDIILSKSLVL 262
ADF+TDD+ILSK LVL
Sbjct: 361 EADFTTDDMILSKKLVL 377