BLASTX nr result

ID: Cephaelis21_contig00001800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00001800
         (1638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   686   0.0  
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]   674   0.0  
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   638   e-180
ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12...   626   e-177
ref|NP_197059.1| transducin/WD40 domain-containing protein [Arab...   625   e-176

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis vinifera]
            gi|296082215|emb|CBI21220.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  686 bits (1771), Expect = 0.0
 Identities = 324/437 (74%), Positives = 374/437 (85%), Gaps = 2/437 (0%)
 Frame = +1

Query: 148  MDIDGDAEEAARRVQVRFVTKLKLPYKVPPTSIAIPSNLTRFGLSTIVNNLIKAGDADWK 327
            M+IDGD EE +RRVQVRF TKL+ P+K PPTSIAIPSNLTR GLS IVNNL+K+G+ DWK
Sbjct: 1    MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60

Query: 328  TEAFDFLIDGELVRMSLEEFLLAKGISAEKILELEYVKAVAPRKEEDPCLHDDWVSAVDG 507
             E FDFLIDGELVRMSLE+FL+AKGISAEKILE+EY+KAVAPRK+E+P LHDDWVSAVDG
Sbjct: 61   PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120

Query: 508  SNPKFILTGCYDGLGRIWKAPGFCTHILEGHTGAINSVCVVKPK-VESNIDQVVATASKD 684
            SNP FILTGCYDGLGR+WKA G CTHILEGH  AI SV  + PK +ES  + VVATASKD
Sbjct: 121  SNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKGLESVNNSVVATASKD 180

Query: 685  MTLKLFKVDTDESLSQQKKVQAFKSFYGHSASVQCIAAEPSGDKICSGSWDCRINLWPAN 864
             TL+L+K D  E      K++AFK  +GH+ASVQ +A +P+G+ +CSGSWDC INLW  +
Sbjct: 181  RTLRLWKFDAGERHDLPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTD 240

Query: 865  ESDSGSGLVSVKKRKKEGD-EEPKSEGEAISTLVGHTQCVSAVVWPEPETIYSASWDHSI 1041
            E D    LVSVKKRK   + EE ++EGEA+ST+VGHTQCVS+V+WP+ ETIYSASWDHS+
Sbjct: 241  EFDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSV 300

Query: 1042 RRWDVETGKDTINMFCGKAFNCLDVGGESSSLLVAGGSDSTLRIWDPRKPGTLAPTFQFS 1221
            RRWDVETGKD+ N+FCGKA NCLDVGGESS+L+ AGGSD+TLRIWDPRKPGTL P FQFS
Sbjct: 301  RRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFS 360

Query: 1222 SHNSWISSCKWHNKSWYHLVSASYDGKVMLWDLRTAWPLAVIHSHSDKVLCVDWWKSESV 1401
            SH SWIS+CKWHNKSW+HL+SASYDGKVMLWDLRTAWPLAVI SH++KVLC DWWK +SV
Sbjct: 361  SHTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNKVLCADWWKGDSV 420

Query: 1402 VSGGADSKLCVSSEISV 1452
            VSGGADSKLC+SSEI V
Sbjct: 421  VSGGADSKLCISSEIPV 437


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score =  674 bits (1740), Expect = 0.0
 Identities = 320/436 (73%), Positives = 370/436 (84%), Gaps = 1/436 (0%)
 Frame = +1

Query: 148  MDIDGDAEEAARRVQVRFVTKLKLPYKVPPTSIAIPSNLTRFGLSTIVNNLIKAGDADWK 327
            M+IDGD EE +RRVQVRF TKL+ P+K PPTSIAIPSNLTR GLS IVNNL+K+G+ DWK
Sbjct: 1    MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60

Query: 328  TEAFDFLIDGELVRMSLEEFLLAKGISAEKILELEYVKAVAPRKEEDPCLHDDWVSAVDG 507
             E FDFLIDGELVRMSLE+FL+AKGISAEKILE+EY+KAVAPRK+E+P LHDDWVSAVDG
Sbjct: 61   PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIKAVAPRKQEEPSLHDDWVSAVDG 120

Query: 508  SNPKFILTGCYDGLGRIWKAPGFCTHILEGHTGAINSVCVVKPKVESNIDQVVATASKDM 687
            SNP FILTGCYDGLGR+WKA G CTHILEGH  AI SV  + PKV       VATASKD 
Sbjct: 121  SNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSVKFIDPKV-------VATASKDR 173

Query: 688  TLKLFKVDTDESLSQQKKVQAFKSFYGHSASVQCIAAEPSGDKICSGSWDCRINLWPANE 867
            TL+L+K     ++    K++AFK  +GH+ASVQ +A +P+G+ +CSGSWDC INLW  +E
Sbjct: 174  TLRLWK---GSAMIFPLKIRAFKILHGHNASVQSVAVQPTGNMVCSGSWDCTINLWRTDE 230

Query: 868  SDSGSGLVSVKKRKKEGD-EEPKSEGEAISTLVGHTQCVSAVVWPEPETIYSASWDHSIR 1044
             D    LVSVKKRK   + EE ++EGEA+ST+VGHTQCVS+V+WP+ ETIYSASWDHS+R
Sbjct: 231  FDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQCVSSVIWPQHETIYSASWDHSVR 290

Query: 1045 RWDVETGKDTINMFCGKAFNCLDVGGESSSLLVAGGSDSTLRIWDPRKPGTLAPTFQFSS 1224
            RWDVETGKD+ N+FCGKA NCLDVGGESS+L+ AGGSD+TLRIWDPRKPGTL P FQFSS
Sbjct: 291  RWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGSDTTLRIWDPRKPGTLTPVFQFSS 350

Query: 1225 HNSWISSCKWHNKSWYHLVSASYDGKVMLWDLRTAWPLAVIHSHSDKVLCVDWWKSESVV 1404
            H SWIS+CKWHNKSW+HL+SASYDGKVMLWDLRTAWPLAVI SH++KVLC DWWK +SVV
Sbjct: 351  HTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHNNKVLCADWWKGDSVV 410

Query: 1405 SGGADSKLCVSSEISV 1452
            SGGADSKLC+SSEI V
Sbjct: 411  SGGADSKLCISSEIPV 426


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  638 bits (1646), Expect = e-180
 Identities = 306/437 (70%), Positives = 360/437 (82%), Gaps = 1/437 (0%)
 Frame = +1

Query: 148  MDIDGDAEEAARRVQVRFVTKLKLPYKVPPTSIAIPSNLTRFGLSTIVNNLIKAGDADWK 327
            MD+D D EE  RRVQVRF+TKLK P+KVP TSIAIP+NLTR GLSTIVN+L+KAGD +W+
Sbjct: 1    MDMDSDVEE--RRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDDEWE 58

Query: 328  TEAFDFLIDGELVRMSLEEFLLAKGISAEKILELEYVKAVAPRKEEDPCLHDDWVSAVDG 507
            ++ FDFLIDGELVR+ LE+FLLAKGISAEK+LE+EY +AV  +KE++P LHDDWVSAVDG
Sbjct: 59   SQPFDFLIDGELVRLPLEQFLLAKGISAEKVLEIEYTRAVVLQKEDEPSLHDDWVSAVDG 118

Query: 508  SNPKFILTGCYDGLGRIWKAPGFCTHILEGHTGAINSVCVVKPKVESNIDQVVATASKDM 687
            S P+FILTGCYD LGR+WKA G CTHILEGH GAI SV VV  +   ++   VATASKD 
Sbjct: 119  SCPRFILTGCYDNLGRVWKAAGECTHILEGHGGAITSVSVVNSEGTDSV--TVATASKDE 176

Query: 688  TLKLFKVDTDESLSQQKKVQAFKSFYGHSASVQCIAAEPSGDKICSGSWDCRINLWPANE 867
            TL+L+K DT+E L Q  K++AFK   GH+A VQ +AAE SG  ICSGSWDC INLW  NE
Sbjct: 177  TLRLWKFDTEEHLDQPSKIRAFKILRGHNAPVQSVAAEASGSMICSGSWDCTINLWRTNE 236

Query: 868  SDSGSGLVSVKKRK-KEGDEEPKSEGEAISTLVGHTQCVSAVVWPEPETIYSASWDHSIR 1044
            SD+ S LVS+KKRK K    E + EG A+STLVGHTQCVS+V WPEP TIYSASWDHS+R
Sbjct: 237  SDTESDLVSIKKRKVKNKAGESQLEGGALSTLVGHTQCVSSVYWPEPNTIYSASWDHSVR 296

Query: 1045 RWDVETGKDTINMFCGKAFNCLDVGGESSSLLVAGGSDSTLRIWDPRKPGTLAPTFQFSS 1224
            RWDVE GKD  N+FCGKA +CL VGGE S+L+ AGGSD  LR+WDPRKPGT AP +QFSS
Sbjct: 297  RWDVEMGKDLSNIFCGKALHCLHVGGEGSALIAAGGSDPILRVWDPRKPGTSAPIYQFSS 356

Query: 1225 HNSWISSCKWHNKSWYHLVSASYDGKVMLWDLRTAWPLAVIHSHSDKVLCVDWWKSESVV 1404
            HNSWIS+CKWH++S +HL+SASYDGK+MLWDLRTAWPLA+I SH DKVLC DWWK +SV+
Sbjct: 357  HNSWISACKWHSESLFHLLSASYDGKLMLWDLRTAWPLAIIDSHEDKVLCADWWKGDSVI 416

Query: 1405 SGGADSKLCVSSEISVM 1455
            SGG DSKL +SS +SV+
Sbjct: 417  SGGVDSKLRISSGVSVL 433


>ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  626 bits (1615), Expect = e-177
 Identities = 291/428 (67%), Positives = 353/428 (82%)
 Frame = +1

Query: 169  EEAARRVQVRFVTKLKLPYKVPPTSIAIPSNLTRFGLSTIVNNLIKAGDADWKTEAFDFL 348
            E +ARR+QVRFVTKL  PYKVP T+IAIP++L RFGLS++VN L+++ DAD + E FDFL
Sbjct: 9    EGSARRIQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQSNDADHQLEPFDFL 68

Query: 349  IDGELVRMSLEEFLLAKGISAEKILELEYVKAVAPRKEEDPCLHDDWVSAVDGSNPKFIL 528
            IDGE VRMSLE+FLLAKGISAE+ILE+EY +AVAPRKEEDP LHDDWVSAVDGS+ +F L
Sbjct: 69   IDGEFVRMSLEQFLLAKGISAERILEIEYTRAVAPRKEEDPSLHDDWVSAVDGSSSRFFL 128

Query: 529  TGCYDGLGRIWKAPGFCTHILEGHTGAINSVCVVKPKVESNIDQVVATASKDMTLKLFKV 708
            TGCYDGLGR+WK  G CTHILEGH+ A+ SV ++ PK E  I   VATASKD TL+L+K+
Sbjct: 129  TGCYDGLGRVWKGAGLCTHILEGHSDAVTSVSIINPKGEETI--TVATASKDRTLRLWKL 186

Query: 709  DTDESLSQQKKVQAFKSFYGHSASVQCIAAEPSGDKICSGSWDCRINLWPANESDSGSGL 888
            + +  ++   +V+A+K F GH +SV C+AA+ SG+ +CS SWDC INLW  N+ ++   L
Sbjct: 187  NAEGPVNNPMRVRAYKIFRGHKSSVNCVAAQTSGEMVCSASWDCTINLWQTNDFNAEDDL 246

Query: 889  VSVKKRKKEGDEEPKSEGEAISTLVGHTQCVSAVVWPEPETIYSASWDHSIRRWDVETGK 1068
            VS K++     EE + EGEA +TLVGHTQCVSAVVWP+ E+IYSASWDHSIR+WDVETGK
Sbjct: 247  VSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQQESIYSASWDHSIRKWDVETGK 306

Query: 1069 DTINMFCGKAFNCLDVGGESSSLLVAGGSDSTLRIWDPRKPGTLAPTFQFSSHNSWISSC 1248
            +  ++FCGK  NCLD+GGE S+L+ AGGSD  +RIWDPRKPGT AP FQFSSH SWIS+C
Sbjct: 307  NLTDLFCGKVLNCLDIGGEGSALIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHTSWISAC 366

Query: 1249 KWHNKSWYHLVSASYDGKVMLWDLRTAWPLAVIHSHSDKVLCVDWWKSESVVSGGADSKL 1428
            KWH++SW+HL+SASYDGKVMLWDLRTAWPL+VI SHSDKVL  DWWKS SV+SGGADSKL
Sbjct: 367  KWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISGGADSKL 426

Query: 1429 CVSSEISV 1452
            C+SSEI V
Sbjct: 427  CISSEIPV 434


>ref|NP_197059.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|9755810|emb|CAC01754.1| putative protein [Arabidopsis
            thaliana] gi|17381110|gb|AAL36367.1| unknown protein
            [Arabidopsis thaliana] gi|20258961|gb|AAM14196.1| unknown
            protein [Arabidopsis thaliana]
            gi|332004793|gb|AED92176.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 433

 Score =  625 bits (1612), Expect = e-176
 Identities = 294/436 (67%), Positives = 359/436 (82%), Gaps = 1/436 (0%)
 Frame = +1

Query: 148  MDIDGDAEEAARRVQVRFVTKLKLPYKVPPTSIAIPSNLTRFGLSTIVNNLIKAGDADWK 327
            MDIDG  E+ +RR+ V+FVTKL  P+KVP  S+AIPSN+TR GLS+IVN++I++ + +WK
Sbjct: 1    MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 58

Query: 328  TEAFDFLIDGELVRMSLEEFLLAKGISAEKILELEYVKAVAPRKEEDPCLHDDWVSAVDG 507
            TE FDFLIDGEL+RMSLEEFLLAKGISAE+ LE+EY++AV PRKEE+P LHDDWVSAV+G
Sbjct: 59   TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 118

Query: 508  SNPKFILTGCYDGLGRIWKAPGFCTHILEGHTGAINSVCVVKPKVESNIDQVVATASKDM 687
            S+P+FILTGCYDGLGR+W + G C+HILEGH+GAI+SV +V       +   VATASKD 
Sbjct: 119  SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETV--TVATASKDR 176

Query: 688  TLKLFKVDTDESLSQQKKVQAFKSFYGHSASVQCIAAEPSGDKICSGSWDCRINLWPANE 867
            TL+LFK D  ES+    KV+A+K   GH ASVQ ++A+ SG+ +CS SWDC INLW  NE
Sbjct: 177  TLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNE 236

Query: 868  SDSGSGLVSVKKRKKEGD-EEPKSEGEAISTLVGHTQCVSAVVWPEPETIYSASWDHSIR 1044
            S S    VSVKKRK     EE +SEGEA+++LVGHTQCVS+VVWPE + IYS+SWDHS+R
Sbjct: 237  STSEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVR 296

Query: 1045 RWDVETGKDTINMFCGKAFNCLDVGGESSSLLVAGGSDSTLRIWDPRKPGTLAPTFQFSS 1224
            RWDVETGKD++N+FCGKA N +DVGGESS+L+ AGGSD  LR+WDPRKPGT AP FQFSS
Sbjct: 297  RWDVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSS 356

Query: 1225 HNSWISSCKWHNKSWYHLVSASYDGKVMLWDLRTAWPLAVIHSHSDKVLCVDWWKSESVV 1404
            H+SWIS+CKWH  SW+HL+SASYDGK+MLWDLRTAWPL+VI +H+DKVL  DWWK ESVV
Sbjct: 357  HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVV 416

Query: 1405 SGGADSKLCVSSEISV 1452
            SGGADS L +SS I++
Sbjct: 417  SGGADSNLRISSGIAI 432


Top