BLASTX nr result

ID: Cephaelis21_contig00000673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000673
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2...   136   7e-30
ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicag...   135   1e-29
ref|XP_003568047.1| PREDICTED: ubiquitin domain-containing prote...   135   2e-29
gb|AFK44107.1| unknown [Lotus japonicus]                              134   3e-29
ref|XP_002522262.1| DNA binding protein, putative [Ricinus commu...   134   3e-29

>ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1|
           predicted protein [Populus trichocarpa]
          Length = 114

 Score =  136 bits (343), Expect = 7e-30
 Identities = 71/128 (55%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = +2

Query: 383 MGCAGSRDKKEE-TAKKIRKPKPWKHSEPMTRAQLVRMRDEFWDTAPXXXXXXXXXXXXX 559
           MGCAGS   K +   KKIRKPKPWKH +P+T++QL++MRDEFWDTAP             
Sbjct: 1   MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPH------------ 48

Query: 560 XXYGGRKEXXXXXXXXXXXXXXXXXXXXXXXGIIVQNPDLTICYDERGAKYELPKYVLSE 739
             YGGRKE                       G+IVQN DLTICYDERGAKYELPKYVLSE
Sbjct: 49  --YGGRKEIWDALRAAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSE 106

Query: 740 PTNLISES 763
           PTNLI E+
Sbjct: 107 PTNLIRET 114


>ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicago truncatula]
           gi|355485363|gb|AES66566.1| Ubiquitin domain-containing
           protein [Medicago truncatula]
           gi|388514353|gb|AFK45238.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  135 bits (341), Expect = 1e-29
 Identities = 69/128 (53%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = +2

Query: 383 MGCAGSRDKKEE-TAKKIRKPKPWKHSEPMTRAQLVRMRDEFWDTAPXXXXXXXXXXXXX 559
           MGCAGS   K + T KKIRKPKPWKH +P+T+ QL+++RDEFWDTAP             
Sbjct: 1   MGCAGSSQAKADGTVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPH------------ 48

Query: 560 XXYGGRKEXXXXXXXXXXXXXXXXXXXXXXXGIIVQNPDLTICYDERGAKYELPKYVLSE 739
             YGGRKE                       G+IVQ+ DLT+CYDERGAKYELPKYVLSE
Sbjct: 49  --YGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSE 106

Query: 740 PTNLISES 763
           PTN+I ES
Sbjct: 107 PTNMIQES 114


>ref|XP_003568047.1| PREDICTED: ubiquitin domain-containing protein 1-like [Brachypodium
           distachyon]
          Length = 113

 Score =  135 bits (340), Expect = 2e-29
 Identities = 67/124 (54%), Positives = 79/124 (63%)
 Frame = +2

Query: 383 MGCAGSRDKKEETAKKIRKPKPWKHSEPMTRAQLVRMRDEFWDTAPXXXXXXXXXXXXXX 562
           MGCAGS+ + +E+ KK+RKPKPWKH++P+T AQL +MRDEFWDTAP              
Sbjct: 1   MGCAGSKPRVDESGKKLRKPKPWKHTQPLTPAQLKQMRDEFWDTAP-------------- 46

Query: 563 XYGGRKEXXXXXXXXXXXXXXXXXXXXXXXGIIVQNPDLTICYDERGAKYELPKYVLSEP 742
            YGG+KE                       G+IV N DLT+CYDERGAKYELPKYVLSEP
Sbjct: 47  HYGGQKEIWDALRAATEADLPLAQTIVDSAGVIVSNSDLTLCYDERGAKYELPKYVLSEP 106

Query: 743 TNLI 754
           TNLI
Sbjct: 107 TNLI 110


>gb|AFK44107.1| unknown [Lotus japonicus]
          Length = 114

 Score =  134 bits (338), Expect = 3e-29
 Identities = 69/127 (54%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
 Frame = +2

Query: 383 MGCAGSRDKKEE-TAKKIRKPKPWKHSEPMTRAQLVRMRDEFWDTAPXXXXXXXXXXXXX 559
           MGCAGS   K + T KKIRKPKPWKH +P+TR QL+++RDEFWDTAP             
Sbjct: 1   MGCAGSSQSKADGTEKKIRKPKPWKHPQPITRTQLIQLRDEFWDTAP------------- 47

Query: 560 XXYGGRKEXXXXXXXXXXXXXXXXXXXXXXXGIIVQNPDLTICYDERGAKYELPKYVLSE 739
             YGGRKE                       G+IVQ+ DLT+CYDERGAKYELPKYVLSE
Sbjct: 48  -HYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSE 106

Query: 740 PTNLISE 760
           PTNLI +
Sbjct: 107 PTNLIRD 113


>ref|XP_002522262.1| DNA binding protein, putative [Ricinus communis]
           gi|223538515|gb|EEF40120.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  134 bits (338), Expect = 3e-29
 Identities = 70/124 (56%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = +2

Query: 383 MGCAGS-RDKKEETAKKIRKPKPWKHSEPMTRAQLVRMRDEFWDTAPXXXXXXXXXXXXX 559
           MGC+GS R K ++ +KKIRKPKPWKHSEP+TR QL++MRDEFWDTAP             
Sbjct: 1   MGCSGSSRAKGDDHSKKIRKPKPWKHSEPITRTQLLQMRDEFWDTAP------------- 47

Query: 560 XXYGGRKEXXXXXXXXXXXXXXXXXXXXXXXGIIVQNPDLTICYDERGAKYELPKYVLSE 739
             YGGRKE                       G+IVQ+ D+TICYDERGAKYELPKYVLSE
Sbjct: 48  -HYGGRKEIWDALHAAAEADLTLAQAIVDSAGVIVQSEDMTICYDERGAKYELPKYVLSE 106

Query: 740 PTNL 751
           PTNL
Sbjct: 107 PTNL 110


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