BLASTX nr result
ID: Cephaelis21_contig00000508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00000508
(570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|3IZR|OO Chain o, Localization Of The Large Subunit Ribosomal... 79 5e-13
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 77 2e-12
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 77 2e-12
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 77 2e-12
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 77 2e-12
>pdb|3IZR|OO Chain o, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 51
Score = 79.0 bits (193), Expect = 5e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -1
Query: 405 QRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 304
QRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 17 QRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName: Full=60S
ribosomal protein L39-3 gi|55771364|dbj|BAD72315.1| 60S
ribosomal protein L39 [Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 402 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 304
RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 18 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 402 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 304
RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 85 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 117
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356515114|ref|XP_003526246.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 2 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays]
Length = 51
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 402 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 304
RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 18 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 50
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -1
Query: 402 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 304
RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG
Sbjct: 66 RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 98