BLASTX nr result

ID: Cephaelis21_contig00000481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00000481
         (1094 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_817535.1| NADH-plastoquinone oxidoreductase subunit 6 [Co...    62   2e-07
ref|YP_004935720.1| ndhG gene product (chloroplast) [Sesamum ind...    61   4e-07
ref|YP_004940563.1| ndhG gene product (chloroplast) [Boea hygrom...    60   7e-07
gb|ADD31331.1| NADH-plastoquinone oxidoreductase subunit 6 prote...    60   7e-07
gb|AEX65231.1| NADH dehydrogenase subunit 6 [Portulaca oleracea]       60   9e-07

>ref|YP_817535.1| NADH-plastoquinone oxidoreductase subunit 6 [Coffea arabica]
           gi|122153672|sp|A0A388.1|NU6C_COFAR RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 6,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase
           subunit 6; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 6 gi|116242217|gb|ABJ89732.1|
           NADH-plastoquinone oxidoreductase subunit 6 [Coffea
           arabica]
          Length = 176

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = +1

Query: 214 IIWTTKSNQILEQDLITNNQQIGVHLSIDFF 306
           IIWTTKSNQILEQDLITN+QQIGVHLS DFF
Sbjct: 123 IIWTTKSNQILEQDLITNSQQIGVHLSTDFF 153


>ref|YP_004935720.1| ndhG gene product (chloroplast) [Sesamum indicum]
           gi|347448349|gb|AEO92760.1| NADH dehydrogenase subunit 6
           (chloroplast) [Sesamum indicum]
          Length = 176

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 SLFLNNWEPVLLFTLLQEA---IIWTTKSNQILEQDLITNNQQIGVHLSIDFF 306
           SLF++     L+ T+L  +   IIWTTKSNQILEQDLI+N+QQIG+HLS DFF
Sbjct: 106 SLFIS-----LITTILDTSWYGIIWTTKSNQILEQDLISNSQQIGIHLSTDFF 153


>ref|YP_004940563.1| ndhG gene product (chloroplast) [Boea hygrometrica]
           gi|340549461|gb|AEK53283.1| NADH-plastoquinone
           oxidoreductase subunit 6 (chloroplast) [Boea
           hygrometrica]
          Length = 176

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +1

Query: 214 IIWTTKSNQILEQDLITNNQQIGVHLSIDFF 306
           IIWTTKSNQILEQDLI+N+QQIG+HLS DFF
Sbjct: 123 IIWTTKSNQILEQDLISNSQQIGIHLSTDFF 153


>gb|ADD31331.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Ehretia
           acuminata]
          Length = 176

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 SLFLNNWEPVLLFTLLQEA---IIWTTKSNQILEQDLITNNQQIGVHLSIDFF 306
           SLF++     L+ T+L  +   IIWTTKSNQI+EQDLI+N+QQIG+HLS DFF
Sbjct: 106 SLFIS-----LITTILDTSWYGIIWTTKSNQIIEQDLISNSQQIGIHLSTDFF 153


>gb|AEX65231.1| NADH dehydrogenase subunit 6 [Portulaca oleracea]
          Length = 176

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = +1

Query: 157 SLFLNNWEPVLLFTLLQEA---IIWTTKSNQILEQDLITNNQQIGVHLSIDFF 306
           SLF++     L+ T+L  +   IIWTT+SNQILEQDLIT +QQIG+HLS DFF
Sbjct: 106 SLFIS-----LIITILNTSWYGIIWTTRSNQILEQDLITTSQQIGIHLSTDFF 153


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