BLASTX nr result
ID: Catharanthus23_contig00040957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00040957
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23583.3| unnamed protein product [Vitis vinifera] 113 3e-23
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a... 113 3e-23
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] 113 3e-23
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a... 108 1e-21
gb|EXB98159.1| SMARCA3-like protein 3 [Morus notabilis] 107 2e-21
ref|XP_006356106.1| PREDICTED: putative SWI/SNF-related matrix-a... 101 9e-20
ref|XP_004234234.1| PREDICTED: putative SWI/SNF-related matrix-a... 101 1e-19
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin... 100 2e-19
ref|XP_006605764.1| PREDICTED: putative SWI/SNF-related matrix-a... 95 1e-17
gb|EMJ26646.1| hypothetical protein PRUPE_ppa000367mg [Prunus pe... 94 1e-17
gb|ESW17830.1| hypothetical protein PHAVU_007G272200g [Phaseolus... 94 2e-17
ref|XP_004497836.1| PREDICTED: putative SWI/SNF-related matrix-a... 89 5e-16
ref|XP_004297995.1| PREDICTED: putative SWI/SNF-related matrix-a... 88 1e-15
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid... 87 2e-15
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ... 87 3e-15
ref|XP_006827507.1| hypothetical protein AMTR_s00009p00179850 [A... 86 7e-15
ref|XP_006279560.1| hypothetical protein CARUB_v10025760mg [Caps... 85 1e-14
gb|EOY05973.1| Helicase protein with RING/U-box domain [Theobrom... 80 3e-13
ref|XP_006385564.1| hypothetical protein POPTR_0003s08160g [Popu... 74 2e-11
gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japo... 68 1e-09
>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 113 bits (282), Expect = 3e-23
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+ST YPL TLF LL+I PFQEAEFTPEEL SRKR L L GD+D+APS LP++K++KG
Sbjct: 458 NIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRKRKLNLEGDTDEAPSMLPIVKQKKGC 517
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
P EQN DEQA+ ESSLNKLVGA
Sbjct: 518 QQYP--EQNNDEQALSESSLNKLVGA 541
>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Vitis vinifera]
Length = 1224
Score = 113 bits (282), Expect = 3e-23
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+ST YPL TLF LL+I PFQEAEFTPEEL SRKR L L GD+D+APS LP++K++KG
Sbjct: 458 NIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRKRKLNLEGDTDEAPSMLPIVKQKKGC 517
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
P EQN DEQA+ ESSLNKLVGA
Sbjct: 518 QQYP--EQNNDEQALSESSLNKLVGA 541
>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
Length = 1249
Score = 113 bits (282), Expect = 3e-23
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+ST YPL TLF LL+I PFQEAEFTPEEL SRKR L L GD+D+APS LP++K++KG
Sbjct: 458 NIDSTVYPLPTLFKLLQIKPFQEAEFTPEELDSRKRKLNLEGDTDEAPSMLPIVKQKKGC 517
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
P EQN DEQA+ ESSLNKLVGA
Sbjct: 518 QQYP--EQNNDEQALSESSLNKLVGA 541
>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Cucumis sativus]
gi|449523563|ref|XP_004168793.1| PREDICTED: putative
SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 3-like
[Cucumis sativus]
Length = 1113
Score = 108 bits (269), Expect = 1e-21
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
HI+ST YPLLTLF LLKI P+Q+AEFTPEEL SRKR LKL D D++ S LP++KRRKG
Sbjct: 353 HIDSTIYPLLTLFKLLKITPYQKAEFTPEELDSRKRLLKLEDDPDESTSMLPLVKRRKGS 412
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
++QNKD+Q + ESSL KLVGA
Sbjct: 413 QQF--ADQNKDDQTLNESSLTKLVGA 436
>gb|EXB98159.1| SMARCA3-like protein 3 [Morus notabilis]
Length = 1373
Score = 107 bits (266), Expect = 2e-21
Identities = 57/86 (66%), Positives = 66/86 (76%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
HI+ST YPLLTLF LKI P+Q+AE+TPEEL SRKR L L + D+A S LP++KRRKG
Sbjct: 609 HIDSTIYPLLTLFKWLKIKPYQKAEYTPEELDSRKRLLNLEAEPDEAGSMLPIVKRRKGC 668
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
P EQ KDEQAV +SSLNKLVGA
Sbjct: 669 QQYP--EQGKDEQAVSQSSLNKLVGA 692
>ref|XP_006356106.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Solanum tuberosum]
Length = 1138
Score = 101 bits (252), Expect = 9e-20
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
I++TTYPLLTLF LLK+ PFQ AEFTP+EL SRKR L L DS++A S L + KRRKG
Sbjct: 378 IDTTTYPLLTLFKLLKVKPFQNAEFTPDELDSRKRQLNLDSDSNEAASVLSIAKRRKGCQ 437
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
SE NKDEQ + E+S+NKLVG+
Sbjct: 438 QY--SEPNKDEQEISEASINKLVGS 460
>ref|XP_004234234.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Solanum lycopersicum]
Length = 1120
Score = 101 bits (251), Expect = 1e-19
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
I++TTYPLLTLF LL++ PFQ AEFTP+EL SRKR L L DS++A S L + KRRKG
Sbjct: 360 IDTTTYPLLTLFKLLRVKPFQNAEFTPDELDSRKRQLNLDSDSNEAASVLSIAKRRKGCQ 419
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
L S+ NKDEQ + E+S+NKLVG+
Sbjct: 420 QL--SQPNKDEQEISEASINKLVGS 442
>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
putative [Ricinus communis]
Length = 1051
Score = 100 bits (250), Expect = 2e-19
Identities = 57/84 (67%), Positives = 65/84 (77%)
Frame = +1
Query: 7 ESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGLP 186
+ST YPLLTLF LLKI P+Q+AEFTPEEL SRKRSL L D+A + LP++KRR G
Sbjct: 309 DSTIYPLLTLFKLLKIGPYQKAEFTPEELDSRKRSLNL---QDEAGAMLPIVKRRMGCQQ 365
Query: 187 LPSSEQNKDEQAVLESSLNKLVGA 258
EQNKDEQA+LESSLNKLVGA
Sbjct: 366 Y--LEQNKDEQAILESSLNKLVGA 387
>ref|XP_006605764.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Glycine max]
Length = 1099
Score = 94.7 bits (234), Expect = 1e-17
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
I+ T YPLL L +L+I P Q+A FTPE++ SRKR L D D+A + LP++KRRKGG
Sbjct: 315 IDDTVYPLLALLKMLEIKPSQKAVFTPEDIDSRKRLLYPKADPDEA-AALPLIKRRKGGE 373
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
PLP EQN DEQA+ ES+LNKLVGA
Sbjct: 374 PLP--EQNNDEQALSESALNKLVGA 396
>gb|EMJ26646.1| hypothetical protein PRUPE_ppa000367mg [Prunus persica]
Length = 1241
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/86 (56%), Positives = 64/86 (74%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+S+ YPLL+ F LLKI P+++AEFTPEEL SRKR L + DD LP++KRRKG
Sbjct: 447 NIDSSIYPLLSQFKLLKIQPYKKAEFTPEELDSRKRLLNIERIPDDGAPVLPLVKRRKG- 505
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
SE+++DEQA+ ESSLNK+VGA
Sbjct: 506 -CQQPSEESRDEQAITESSLNKIVGA 530
>gb|ESW17830.1| hypothetical protein PHAVU_007G272200g [Phaseolus vulgaris]
Length = 1063
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
I+ T YPLL L +L+I P Q+AEFTPE++ SRKR L S +SD+A + LP++KRRKGG
Sbjct: 305 IDDTIYPLLALLKMLEIKPSQKAEFTPEDIDSRKRLLYPSAESDEA-AGLPLIKRRKGGE 363
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
P+P EQ DEQA+ ES+LNK++GA
Sbjct: 364 PIP--EQTHDEQALSESALNKIIGA 386
>ref|XP_004497836.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Cicer arietinum]
Length = 1137
Score = 89.4 bits (220), Expect = 5e-16
Identities = 53/86 (61%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKG-G 180
I ST YPLLTL N+L+I+P ++A+FTPEE+ +RKR LKL DSD+A S L + KRRKG
Sbjct: 366 INSTAYPLLTLLNMLEIEPHRKADFTPEEMKARKRILKL--DSDEA-SALHVTKRRKGVS 422
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
PLP E N++EQA+ ES+LNKLVGA
Sbjct: 423 EPLP--EPNENEQALSESALNKLVGA 446
>ref|XP_004297995.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3-like [Fragaria vesca subsp. vesca]
Length = 1231
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/87 (54%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+ST YPLLTLF LL + P+Q+A FTPEEL SRKR L + ++AP LP KRRKG
Sbjct: 471 NIDSTLYPLLTLFKLLNVQPYQKAVFTPEELDSRKRLLNIERIPNEAPLALPAPKRRKGS 530
Query: 181 LP-LPSSEQNKDEQAVLESSLNKLVGA 258
S + +EQ++ ESSLNK+VGA
Sbjct: 531 QQGSQKSPEENNEQSISESSLNKIVGA 557
>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
Full=Putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 3; Short=SMARCA3-like protein 3
gi|10178192|dbj|BAB11616.1| DNA repair protein-like
[Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
Helicase protein with RING/U-box domain [Arabidopsis
thaliana]
Length = 1277
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
++EST +PLL LF L I P+Q+AEFTPEEL SRKRSL L D D+ + L + KRRKG
Sbjct: 514 NLESTLHPLLQLFKHLTIKPYQKAEFTPEELNSRKRSLNLEDDYDERAALLAIAKRRKG- 572
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
S EQNKDE+ ES +N++VGA
Sbjct: 573 -CQQSLEQNKDEEEAPESYMNRVVGA 597
>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311253|gb|EFH41677.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1305
Score = 86.7 bits (213), Expect = 3e-15
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+IEST +PLL LF L I P+Q+AEFTPEEL SRKRSL L D D+ + L + KRRKG
Sbjct: 542 NIESTLHPLLQLFKHLTIKPYQKAEFTPEELNSRKRSLNLEDDFDERAALLAIAKRRKG- 600
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
S EQNKDE+ +S +N++VGA
Sbjct: 601 -CQQSLEQNKDEEEAPDSYMNRVVGA 625
>ref|XP_006827507.1| hypothetical protein AMTR_s00009p00179850 [Amborella trichopoda]
gi|548832127|gb|ERM94923.1| hypothetical protein
AMTR_s00009p00179850 [Amborella trichopoda]
Length = 1091
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/85 (54%), Positives = 59/85 (69%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
++ST +P+ TLF LLKI PFQ+AEFTPEEL RKRSL L SD++ +P LKR G
Sbjct: 326 LDSTVHPVPTLFKLLKIKPFQKAEFTPEELNKRKRSLNLQDGSDESALLMPPLKRISGIT 385
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
PL E N EQA+ +S ++KL+GA
Sbjct: 386 PL---EGNNQEQALSDSVMSKLIGA 407
>ref|XP_006279560.1| hypothetical protein CARUB_v10025760mg [Capsella rubella]
gi|482548264|gb|EOA12458.1| hypothetical protein
CARUB_v10025760mg [Capsella rubella]
Length = 1196
Score = 84.7 bits (208), Expect = 1e-14
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+++ST +PLL LF L I P+Q+AEFTPEEL SRKRSL L D D+ + L + KRRKG
Sbjct: 457 NVDSTLHPLLQLFKHLTIKPYQKAEFTPEELNSRKRSLNLEDDFDERAALLAIGKRRKG- 515
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVG 255
L S EQNKDE+ ES N++VG
Sbjct: 516 -CLQSLEQNKDEEDAPESFTNRIVG 539
>gb|EOY05973.1| Helicase protein with RING/U-box domain [Theobroma cacao]
Length = 1125
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/85 (50%), Positives = 56/85 (65%)
Frame = +1
Query: 4 IESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGGL 183
+EST PLL LF L + P+Q+A+FTPEEL+S KR L + D +A LP+ KRRK L
Sbjct: 363 MESTLNPLLNLFKHLNLRPYQKADFTPEELSSGKRVLHIEDDYGEAEGALPIAKRRKSCL 422
Query: 184 PLPSSEQNKDEQAVLESSLNKLVGA 258
EQNKDEQ + E+S NK+ G+
Sbjct: 423 -----EQNKDEQDISEASFNKIFGS 442
>ref|XP_006385564.1| hypothetical protein POPTR_0003s08160g [Populus trichocarpa]
gi|550342691|gb|ERP63361.1| hypothetical protein
POPTR_0003s08160g [Populus trichocarpa]
Length = 937
Score = 74.3 bits (181), Expect = 2e-11
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPMLKRRKGG 180
+I+ T +PL TLF LL + P+Q+AEF+P EL SRKR L +DA L ++KR G
Sbjct: 157 NIDPTVHPLATLFKLLDMKPYQKAEFSPAELDSRKRPLNYEDPEEDA-VMLHVVKRGSG- 214
Query: 181 LPLPSSEQNKDEQAVLESSLNKLVGA 258
+Q KDEQA ESSLNKLVGA
Sbjct: 215 ---CQQDQEKDEQAFSESSLNKLVGA 237
>gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group]
Length = 1132
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 HIESTTYPLLTLFNLLKIDPFQEAEFTPEELASRKRSLKLSGDSDDAPSTLPML---KRR 171
+++ +T PL LF LLK+ F +A+ TPEELA+ KR L GD +D + ++ RR
Sbjct: 375 NVDYSTNPLYRLFRLLKLRAFTKADITPEELAAGKRPRNLRGDDNDEDEPMAIVGLENRR 434
Query: 172 KGGLPLPSSEQNKDEQAVLESSLNKLVG 255
G P EQ DEQA+ E++LNK+VG
Sbjct: 435 TAGQTFP--EQGTDEQAISEAALNKIVG 460