BLASTX nr result
ID: Catharanthus23_contig00040883
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00040883
(348 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 104 1e-20
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 96 4e-20
emb|CAN75570.1| hypothetical protein VITISV_001271 [Vitis vinifera] 102 4e-20
emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera] 100 5e-20
ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292... 96 5e-20
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 102 5e-20
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 102 7e-20
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 101 1e-19
ref|XP_004235123.1| PREDICTED: uncharacterized protein LOC101259... 92 1e-19
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 96 2e-19
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 94 2e-19
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 100 2e-19
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 100 3e-19
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 96 3e-19
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 99 4e-19
emb|CAN74412.1| hypothetical protein VITISV_042388 [Vitis vinifera] 99 4e-19
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera] 98 1e-18
ref|XP_004305666.1| PREDICTED: uncharacterized protein LOC101305... 92 1e-18
emb|CAN75758.1| hypothetical protein VITISV_017338 [Vitis vinifera] 97 2e-18
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 90 2e-18
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 104 bits (259), Expect = 1e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DMCLMDV+ TYLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G MW
Sbjct: 274 DMCLMDVITTYLYGSMDNDIYMKIPEGFKLPEANNTKPRSMYSIKLQRSLYGLKQSGRMW 333
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YN L E LL GY N+P+CPCIFI+K + F
Sbjct: 334 YNCLSEYLLKEGYVNNPICPCIFIKKSETGF 364
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 95.9 bits (237), Expect(2) = 4e-20
Identities = 53/94 (56%), Positives = 63/94 (67%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K +M LMDVV YLY L ++I M+IP+ F +P K S SIKL KS Y LKQ G
Sbjct: 473 KLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPETYKDSR-ETCSIKLQKSLYGLKQSGR 531
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKFV 2
MWYNRL E LL GYKND +CPCIFI++ S+FV
Sbjct: 532 MWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFV 565
Score = 27.7 bits (60), Expect(2) = 4e-20
Identities = 9/18 (50%), Positives = 17/18 (94%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D+ITF+YL++L V+E++
Sbjct: 457 VDAITFRYLINLAVYEKL 474
>emb|CAN75570.1| hypothetical protein VITISV_001271 [Vitis vinifera]
Length = 544
Score = 102 bits (255), Expect = 4e-20
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LM+V+ TYLY + NDI+M+IPK F +P + YSIKL +S Y LKQ G+MW
Sbjct: 394 DMHLMBVITTYLYGSMDNDIYMKIPKGFKLPEVNSTKXHRMYSIKLQRSLYXLKQSGHMW 453
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL + LL GY N+P+CPCIFI++ ++F
Sbjct: 454 YNRLSKYLLKEGYVNNPICPCIFIKRSETEF 484
>emb|CAN70087.1| hypothetical protein VITISV_039203 [Vitis vinifera]
Length = 1140
Score = 100 bits (249), Expect(2) = 5e-20
Identities = 50/91 (54%), Positives = 61/91 (67%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LMDV+ TYLY ++NDI+M+IPK F +P YSIKL +S Y LKQ G +W
Sbjct: 778 DMHLMDVITTYLYESMNNDIYMKIPKGFKLPGENSIKSRSMYSIKLQRSLYGLKQSGRIW 837
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P CPCIFI+K + F
Sbjct: 838 YNRLSEYLLKEGYVNNPTCPCIFIKKSETGF 868
Score = 22.7 bits (47), Expect(2) = 5e-20
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHE 283
+D+ITF +L++LVV E
Sbjct: 760 MDAITFCFLINLVVSE 775
>ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292366 [Fragaria vesca
subsp. vesca]
Length = 611
Score = 95.5 bits (236), Expect(2) = 5e-20
Identities = 47/94 (50%), Positives = 62/94 (65%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K DM LMDVV YLY DL ++I+M++P +P + S Y+I+L +S Y LKQ G
Sbjct: 428 KLDMQLMDVVTAYLYGDLDSEIYMKVPDGITLPKSSDSKPRSAYAIRLQRSLYGLKQSGR 487
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKFV 2
MWY RL + L+ GYKND +CPC+FI+K S FV
Sbjct: 488 MWYTRLSDYLIREGYKNDELCPCVFIKKTTSGFV 521
Score = 27.7 bits (60), Expect(2) = 5e-20
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D ITF+YLVSLVV E++
Sbjct: 412 MDVITFRYLVSLVVSEKL 429
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 102 bits (254), Expect = 5e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LMDV+ TYLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G MW
Sbjct: 1058 DMRLMDVITTYLYGSMDNDIYMKIPEGFELPDANNTKPRSMYSIKLQRSLYGLKQSGRMW 1117
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 1118 YNRLSEYLLKEGYVNNPICPCIFIKKSETGF 1148
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 102 bits (253), Expect = 7e-20
Identities = 50/91 (54%), Positives = 63/91 (69%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LMDV+ YLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G MW
Sbjct: 942 DMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMW 1001
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K ++F
Sbjct: 1002 YNRLSEYLLKEGYVNNPICPCIFIKKSETRF 1032
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 101 bits (251), Expect = 1e-19
Identities = 50/91 (54%), Positives = 63/91 (69%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
D+ LMDV+ TYLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G MW
Sbjct: 986 DIRLMDVITTYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYELKQSGRMW 1045
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 1046 YNRLSEYLLKEGYVNNPICPCIFIKKSETGF 1076
>ref|XP_004235123.1| PREDICTED: uncharacterized protein LOC101259517 [Solanum
lycopersicum]
Length = 783
Score = 92.4 bits (228), Expect(2) = 1e-19
Identities = 51/94 (54%), Positives = 63/94 (67%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K +M LM+VV YLY L ++I M+I + F +P A K S SIKL K Y LKQ G
Sbjct: 605 KLEMRLMEVVTAYLYGSLDHNIFMKISEAFKVPEAYKDSR-ETCSIKLQKYLYGLKQLGR 663
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKFV 2
MWYNRL + LL GYKNDP+CPCIFI++ S+FV
Sbjct: 664 MWYNRLSKYLLKKGYKNDPICPCIFIKRLGSEFV 697
Score = 29.3 bits (64), Expect(2) = 1e-19
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D+ITF+YL++L VHE++
Sbjct: 589 VDAITFRYLINLKVHEKL 606
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 96.3 bits (238), Expect(2) = 2e-19
Identities = 47/90 (52%), Positives = 60/90 (66%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
D+ LMDVV YLY L N+I+MR+P+ + K+ Y I+L +S Y LKQ G MW
Sbjct: 714 DLRLMDVVTAYLYGPLDNEIYMRLPEGIELKGKDKNGSRDQYCIRLNRSLYGLKQSGRMW 773
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSK 8
YNRL E L+ GYKNDP+ PCIFI+K+ SK
Sbjct: 774 YNRLSEYLVKEGYKNDPISPCIFIKKFASK 803
Score = 25.0 bits (53), Expect(2) = 2e-19
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D+ TF+YL+SL + E +
Sbjct: 696 VDATTFRYLISLAIRENL 713
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 93.6 bits (231), Expect(2) = 2e-19
Identities = 46/93 (49%), Positives = 61/93 (65%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K DM LMDVV YLY DL ++I+M++P +P + S Y+I+L +S Y LKQ G
Sbjct: 416 KLDMQLMDVVTAYLYGDLDSEIYMKVPDGITLPKSSNSKPRSAYAIRLQRSLYGLKQSGR 475
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
MWY RL + L+ GYKND +CPC+FI+K S F
Sbjct: 476 MWYTRLSDYLIREGYKNDELCPCVFIKKTSSGF 508
Score = 27.7 bits (60), Expect(2) = 2e-19
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D ITF+YLVSLVV E++
Sbjct: 400 MDVITFRYLVSLVVSEKL 417
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 100 bits (249), Expect = 2e-19
Identities = 50/91 (54%), Positives = 62/91 (68%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LMDV+ YLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G MW
Sbjct: 922 DMRLMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRNMYSIKLQRSLYGLKQSGRMW 981
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 982 YNRLSEYLLKEGYVNNPICPCIFIKKSETGF 1012
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 100 bits (248), Expect = 3e-19
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM MDV+ YLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G+MW
Sbjct: 743 DMRXMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSGHMW 802
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 803 YNRLSEYLLKEGYVNNPICPCIFIKKSETGF 833
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 95.5 bits (236), Expect(2) = 3e-19
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
D+ LMDVV YLY L N+I+MR+P+ + K+ Y I++ +S Y LKQ G MW
Sbjct: 714 DLRLMDVVTAYLYGPLDNEIYMRLPEGIELKGKDKNGSRDQYCIRMNRSLYGLKQSGRMW 773
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSK 8
YNRL E L+ GYKNDP+ PCIFI+K+ SK
Sbjct: 774 YNRLSEYLVKEGYKNDPISPCIFIKKFASK 803
Score = 25.0 bits (53), Expect(2) = 3e-19
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D+ TF+YL+SL + E +
Sbjct: 696 VDATTFRYLISLAIRENL 713
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/92 (54%), Positives = 64/92 (69%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM LM+V+ TYLY + NDI+M+IP+ F + A + YSIKL +S Y LKQ G MW
Sbjct: 247 DMRLMNVITTYLYGSIDNDIYMKIPEGFKLLEANNTKPRSIYSIKLQQSLYGLKQSGRMW 306
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKFV 2
YNRL E LL GY N+P+CPCIFI+K ++FV
Sbjct: 307 YNRLSEYLLKEGYVNNPICPCIFIKKSETRFV 338
>emb|CAN74412.1| hypothetical protein VITISV_042388 [Vitis vinifera]
Length = 1146
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/91 (52%), Positives = 62/91 (68%)
Frame = -3
Query: 277 DMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMW 98
DM L+D++ TYLY + NDI+++IPK F +P + YSIKL +S Y LKQ G MW
Sbjct: 754 DMRLIDIITTYLYGSMDNDIYIKIPKGFKLPETNNTKPRSMYSIKLQQSLYGLKQSGRMW 813
Query: 97 YNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
YNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 814 YNRLSEYLLKEGYVNNPICPCIFIKKLETGF 844
>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
Length = 1501
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = -3
Query: 283 KDDMCL-MDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYG 107
KD +C+ MDV+ YLY + NDI+M+IP+ F +P A + YSIKL +S Y LKQ G
Sbjct: 1060 KDWICVSMDVITAYLYGSMDNDIYMKIPEGFKLPDANNTKPRSMYSIKLQRSLYGLKQSG 1119
Query: 106 YMWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
MWYNRL E LL GY N+P+CPCIFI+K + F
Sbjct: 1120 RMWYNRLSEYLLKEGYVNNPICPCIFIKKSETGF 1153
>ref|XP_004305666.1| PREDICTED: uncharacterized protein LOC101305583 [Fragaria vesca
subsp. vesca]
Length = 2430
Score = 91.7 bits (226), Expect(2) = 1e-18
Identities = 46/93 (49%), Positives = 61/93 (65%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K DM LMDVV YLY DL ++I+M++P +P + S +SI+L +S Y LKQ G
Sbjct: 1666 KLDMQLMDVVTAYLYGDLDSEIYMKVPNGLPLPKSSSSKPRSAFSIRLRRSLYGLKQSGR 1725
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
MWYNRL E L+ GY N+ +CPC+FI+K S F
Sbjct: 1726 MWYNRLSEYLIRKGYVNNELCPCVFIKKTSSGF 1758
Score = 26.6 bits (57), Expect(2) = 1e-18
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D ITF YLVSLVV E++
Sbjct: 1650 MDVITFLYLVSLVVSEKL 1667
>emb|CAN75758.1| hypothetical protein VITISV_017338 [Vitis vinifera]
Length = 136
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/85 (56%), Positives = 58/85 (68%)
Frame = -3
Query: 274 MCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGYMWY 95
MCLMDV+ TYLY + NDIHM+IP+ F +P A YSIKL +S YVLKQ G+MWY
Sbjct: 1 MCLMDVITTYLYGSMDNDIHMKIPEGFKLPEANCIKSRSMYSIKLQQSLYVLKQSGHMWY 60
Query: 94 NRLRESLLIAGYKNDPVCPCIFIRK 20
L E LL Y N+P+ PCIFI+K
Sbjct: 61 YHLSEYLLKEWYMNNPIYPCIFIKK 85
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 89.7 bits (221), Expect(2) = 2e-18
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = -3
Query: 283 KDDMCLMDVVPTYLYMDLSNDIHMRIPK*FNMPAACKSSCCGNYSIKL*KSSYVLKQYGY 104
K DM LMDVV TYLY DL ++I+M++P +P + S +SI+L S Y LKQ G
Sbjct: 1048 KLDMQLMDVVTTYLYGDLDSEIYMKVPDGLQLPKSSGSKPRSAFSIRLKHSLYGLKQSGR 1107
Query: 103 MWYNRLRESLLIAGYKNDPVCPCIFIRKYVSKF 5
MWYNRL + L+ GY N+ +CPC+FI++ S F
Sbjct: 1108 MWYNRLSDYLIGKGYINNEICPCVFIKRTSSGF 1140
Score = 27.7 bits (60), Expect(2) = 2e-18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 330 IDSITFQYLVSLVVHERM 277
+D ITF+YLVSLVV E++
Sbjct: 1032 MDVITFRYLVSLVVSEKL 1049