BLASTX nr result

ID: Catharanthus23_contig00040822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00040822
         (275 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi...    82   7e-14
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]      82   1e-13
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   5e-13
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
emb|CBI24422.3| unnamed protein product [Vitis vinifera]               78   1e-12
gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily p...    75   1e-11
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002299777.1| pentatricopeptide repeat-containing family p...    73   4e-11
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citr...    72   1e-10
gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus...    69   6e-10
ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella burs...    67   3e-09
gb|EMS59351.1| hypothetical protein TRIUR3_09072 [Triticum urartu]     66   4e-09
ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
gb|EPS65182.1| hypothetical protein M569_09592 [Genlisea aurea]        66   5e-09

>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Solanum tuberosum]
          Length = 509

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/57 (68%), Positives = 49/57 (85%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRIT 82
           + VRKKMKALGIQKRPGISS+EVD V++EFV+GD+SHV A  +Y MLE LS EL+++
Sbjct: 439 STVRKKMKALGIQKRPGISSIEVDGVLNEFVAGDRSHVHAEQVYAMLEHLSGELKVS 495


>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
          Length = 508

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELR 88
           VRK MKALGIQK PG SS+E+DC IHEFV+GDKSHV+ + IY MLELLS EL+
Sbjct: 442 VRKTMKALGIQKTPGFSSIEIDCNIHEFVAGDKSHVDKNCIYSMLELLSSELK 494


>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 504

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           + VRK MK LGIQK PG SSVE+DC IHEFV+GDKSHV+A  IY  LELLS EL++
Sbjct: 438 SKVRKTMKDLGIQKTPGFSSVEIDCDIHEFVAGDKSHVDAEYIYSTLELLSFELKL 493


>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05750, chloroplastic-like [Cucumis sativus]
          Length = 525

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           NNVR+ MKA G+QK+PG SSVE+D  +HEFV+GD  H +A NIY ML+LL HEL++
Sbjct: 450 NNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKV 505


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Cucumis sativus]
          Length = 525

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           NNVR+ MKA G+QK+PG SSVE+D  +HEFV+GD  H +A NIY ML+LL HEL++
Sbjct: 450 NNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKV 505


>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Solanum lycopersicum]
          Length = 507

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 36/57 (63%), Positives = 48/57 (84%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRIT 82
           + VRKKMKALGIQKRPG SS+E+D V++EFV+GD+SH+ A  +Y MLE LS EL+++
Sbjct: 437 STVRKKMKALGIQKRPGTSSIEIDGVLNEFVAGDRSHLHAEQVYAMLEHLSGELKVS 493


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Vitis vinifera]
          Length = 518

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           + VRKKMKALGI K+PG SS+E+D  IHEFV+GDK+HVE  NIY ML+ L  ELRI
Sbjct: 447 SKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRI 502


>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           + VRKKMKALGI K+PG SS+E+D  IHEFV+GDK+HVE  NIY ML+ L  ELRI
Sbjct: 431 SKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRI 486


>gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 509

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 34/61 (55%), Positives = 47/61 (77%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRITFCE 73
           + VR++MKALGIQK+PG SS+E+   +HEFV+GDKSH+E   IY+MLELL  +L ++   
Sbjct: 438 SKVRRRMKALGIQKKPGFSSIEISGCVHEFVAGDKSHLETECIYKMLELLCFDLLLSGYA 497

Query: 72  P 70
           P
Sbjct: 498 P 498


>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Glycine max]
          Length = 521

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           N VR++MK  GIQK+PG SS+E+D  IH+FVSGDKSH E  +IY  LE LS EL++
Sbjct: 450 NKVRRRMKERGIQKKPGFSSIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQL 505


>ref|XP_002299777.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222847035|gb|EEE84582.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -3

Query: 243 RKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHE 94
           R  MKALGIQK+PG SS+E+ C IHEFV+GDKSH +A +IY MLELLS +
Sbjct: 371 RMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSMLELLSFD 420


>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Citrus sinensis]
          Length = 509

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/54 (55%), Positives = 45/54 (83%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           +R+ MK  GIQK+PG+SS+E+   IHEF++GD+SH+E+ +IY MLELLS +L++
Sbjct: 440 IRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 493


>ref|XP_006424118.1| hypothetical protein CICLE_v10028449mg [Citrus clementina]
           gi|557526052|gb|ESR37358.1| hypothetical protein
           CICLE_v10028449mg [Citrus clementina]
          Length = 445

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/54 (55%), Positives = 45/54 (83%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           +R+ MK  GIQK+PG+SS+E+   IHEF++GD+SH+E+ +IY MLELLS +L++
Sbjct: 370 IRRTMKGRGIQKKPGLSSIEIGSGIHEFMAGDRSHIESEHIYSMLELLSFDLKL 423


>gb|ESW22027.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
          Length = 514

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/56 (58%), Positives = 42/56 (75%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRI 85
           N VR+ MK  GIQK PG SS+E+D  IH+FV+GDKSH E  ++Y  LELLS EL++
Sbjct: 443 NKVRRIMKERGIQKIPGFSSIEIDSSIHKFVAGDKSHEENDHVYAALELLSFELQL 498


>ref|XP_004954053.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Setaria italica]
          Length = 496

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHEL 91
           VR  MKA G++KRPG S+VEVD  +HEFVSGD+SH++A +I  ML LL HE+
Sbjct: 429 VRSLMKARGLKKRPGYSAVEVDGDVHEFVSGDRSHLQAESIGEMLGLLRHEM 480


>gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
          Length = 489

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/71 (42%), Positives = 50/71 (70%)
 Frame = -3

Query: 252 NNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRITFCE 73
           + +R+KMK LG++K+PG SS+E+D   H F++GD +HVE  +I  +LEL+S +L++  CE
Sbjct: 419 SQMRRKMKGLGLKKQPGFSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQLQGCE 478

Query: 72  PA*LDNLYMTE 40
              L   ++T+
Sbjct: 479 DETLAGDHLTD 489


>gb|EMS59351.1| hypothetical protein TRIUR3_09072 [Triticum urartu]
          Length = 483

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHEL 91
           VR  MKA G++KRPG S+VE+D  +HEFV GD+SH +A  ++ ML LLSHE+
Sbjct: 236 VRGLMKARGVKKRPGRSAVEIDGAVHEFVCGDRSHPQAEEVFDMLGLLSHEM 287


>ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 547

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = -3

Query: 255 LNNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELRITFC 76
           ++NVRK+M   G+QK PG SS+EVD VIHEF+SGDKSH    ++Y ML  +  +L+I   
Sbjct: 396 VHNVRKRMFDSGVQKVPGSSSIEVDGVIHEFISGDKSHSRKKDVYEMLGEICQQLKIAGY 455

Query: 75  EP 70
            P
Sbjct: 456 AP 457


>ref|XP_006647969.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Oryza brachyantha]
          Length = 437

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = -3

Query: 246 VRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHEL 91
           VR  MKA G++KRPG S+VEVD  +HEFVSGD+SH +A  I  ML LL HE+
Sbjct: 372 VRNLMKARGLRKRPGYSAVEVDGGVHEFVSGDRSHPQAEEISHMLALLIHEM 423


>gb|EPS65182.1| hypothetical protein M569_09592 [Genlisea aurea]
          Length = 579

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/57 (50%), Positives = 45/57 (78%)
 Frame = -3

Query: 258 DLNNVRKKMKALGIQKRPGISSVEVDCVIHEFVSGDKSHVEAHNIYRMLELLSHELR 88
           D  + RKKMK+LG+QK+PG+S++EV   IH+F++GD+SHV++  IY  L+ +S EL+
Sbjct: 424 DAAHTRKKMKSLGMQKKPGLSTIEVSGFIHKFMAGDQSHVDSDTIYMTLKHVSDELK 480