BLASTX nr result
ID: Catharanthus23_contig00040806
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00040806 (290 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera] 150 1e-34 ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306... 93 4e-17 ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica... 63 5e-08 ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [A... 52 8e-06 >emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera] Length = 280 Score = 150 bits (380), Expect = 1e-34 Identities = 69/70 (98%), Positives = 70/70 (100%) Frame = -3 Query: 255 APLPAYPYKTRVGGSRSYKVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 76 APLPAYPYKTRVGGSRSY+VPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 264 Query: 75 SRKLRGDYFT 46 SRKLRGDYFT Sbjct: 265 SRKLRGDYFT 274 >ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306133 [Fragaria vesca subsp. vesca] Length = 155 Score = 92.8 bits (229), Expect = 4e-17 Identities = 45/51 (88%), Positives = 45/51 (88%) Frame = +3 Query: 57 PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFFLLGGYSE*WVPCRT 209 PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIF LLGGYSE P T Sbjct: 43 PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFCLLGGYSEQLSPLST 93 >ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula] gi|355477316|gb|AES58519.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula] Length = 556 Score = 62.8 bits (151), Expect = 5e-08 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = +3 Query: 207 TSTRLLGSCMDMQEGVLLGVCRGCVCSR 290 TSTRLLGSCMDMQEGVLLGVCRGCVCSR Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSR 202 >ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [Amborella trichopoda] gi|548854709|gb|ERN12619.1| hypothetical protein AMTR_s00025p00230340 [Amborella trichopoda] Length = 297 Score = 51.6 bits (122), Expect(2) = 8e-06 Identities = 26/45 (57%), Positives = 28/45 (62%) Frame = -1 Query: 179 PSQKEKDVSVRFGSS*LGWAGSTRNAMLTHKTTPLPESFAGTTLR 45 P QK + S L WAG T NAMLTH+T PLPESF GT LR Sbjct: 228 PMQKHTTLHSSTKRSILDWAGLTENAMLTHETIPLPESFVGTPLR 272 Score = 23.5 bits (49), Expect(2) = 8e-06 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = -3 Query: 39 PVGGLLHKAPAEE 1 PVG LHKA AEE Sbjct: 279 PVGTFLHKASAEE 291