BLASTX nr result

ID: Catharanthus23_contig00040806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00040806
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   150   1e-34
ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306...    93   4e-17
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    63   5e-08
ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [A...    52   8e-06

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  150 bits (380), Expect = 1e-34
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = -3

Query: 255 APLPAYPYKTRVGGSRSYKVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 76
           APLPAYPYKTRVGGSRSY+VPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS
Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDYPS 264

Query: 75  SRKLRGDYFT 46
           SRKLRGDYFT
Sbjct: 265 SRKLRGDYFT 274


>ref|XP_004298284.1| PREDICTED: uncharacterized protein LOC101306133 [Fragaria vesca
           subsp. vesca]
          Length = 155

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 45/51 (88%), Positives = 45/51 (88%)
 Frame = +3

Query: 57  PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFFLLGGYSE*WVPCRT 209
           PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIF LLGGYSE   P  T
Sbjct: 43  PREAFGKRGSLVCKHSISGRTRPTQLRRTEPDRHIFCLLGGYSEQLSPLST 93


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 207 TSTRLLGSCMDMQEGVLLGVCRGCVCSR 290
           TSTRLLGSCMDMQEGVLLGVCRGCVCSR
Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSR 202


>ref|XP_006851038.1| hypothetical protein AMTR_s00025p00230340 [Amborella trichopoda]
           gi|548854709|gb|ERN12619.1| hypothetical protein
           AMTR_s00025p00230340 [Amborella trichopoda]
          Length = 297

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 26/45 (57%), Positives = 28/45 (62%)
 Frame = -1

Query: 179 PSQKEKDVSVRFGSS*LGWAGSTRNAMLTHKTTPLPESFAGTTLR 45
           P QK   +      S L WAG T NAMLTH+T PLPESF GT LR
Sbjct: 228 PMQKHTTLHSSTKRSILDWAGLTENAMLTHETIPLPESFVGTPLR 272



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -3

Query: 39  PVGGLLHKAPAEE 1
           PVG  LHKA AEE
Sbjct: 279 PVGTFLHKASAEE 291


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