BLASTX nr result
ID: Catharanthus23_contig00040326
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00040326
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobrom... 190 2e-46
gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao] 190 2e-46
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 186 4e-45
ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, part... 186 4e-45
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F... 186 4e-45
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 183 2e-44
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 182 4e-44
emb|CBI37515.3| unnamed protein product [Vitis vinifera] 182 5e-44
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ... 182 5e-44
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 181 9e-44
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 181 1e-43
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 181 1e-43
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 181 1e-43
ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3... 179 3e-43
gb|ESW09772.1| hypothetical protein PHAVU_009G154800g [Phaseolus... 179 3e-43
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric... 178 7e-43
gb|EMJ14258.1| hypothetical protein PRUPE_ppa020488mg, partial [... 176 2e-42
ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial... 176 2e-42
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 176 2e-42
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 175 5e-42
>gb|EOX92638.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
Length = 845
Score = 190 bits (482), Expect = 2e-46
Identities = 81/104 (77%), Positives = 96/104 (92%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
V+GILSR QGLR+R+GRSRFN+IFEFNY++ G+PC M FTSVTGHLME+EF++RF+KWHS
Sbjct: 20 VSGILSRNQGLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSVTGHLMELEFEDRFRKWHS 79
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDK+DIKRTLE EAR CQWL+LWLDCDR
Sbjct: 80 CDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCDR 123
>gb|EOX92637.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
Length = 914
Score = 190 bits (482), Expect = 2e-46
Identities = 81/104 (77%), Positives = 96/104 (92%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
V+GILSR QGLR+R+GRSRFN+IFEFNY++ G+PC M FTSVTGHLME+EF++RF+KWHS
Sbjct: 20 VSGILSRNQGLRVRDGRSRFNRIFEFNYSVRGQPCHMLFTSVTGHLMELEFEDRFRKWHS 79
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDK+DIKRTLE EAR CQWL+LWLDCDR
Sbjct: 80 CDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLWLDCDR 123
>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
Length = 940
Score = 186 bits (471), Expect = 4e-45
Identities = 80/104 (76%), Positives = 94/104 (90%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VAGILS+ QGLR+REGRSR+NKI+EFNY+I G+PC M TSVTGHLME++FDER++KWHS
Sbjct: 53 VAGILSKNQGLRIREGRSRYNKIYEFNYSIRGQPCHMLMTSVTGHLMELDFDERYRKWHS 112
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDK DIK+TLE EAR CQWL+LWLDCDR
Sbjct: 113 CDPADLYHAPVRKHVPEDKKDIKKTLEEEARRCQWLVLWLDCDR 156
>ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, partial [Citrus clementina]
gi|557534244|gb|ESR45362.1| hypothetical protein
CICLE_v10003112mg, partial [Citrus clementina]
Length = 794
Score = 186 bits (471), Expect = 4e-45
Identities = 80/104 (76%), Positives = 94/104 (90%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VAGILS+ QGLR+REGRSR+NKI+EFNY+I G+PC M TSVTGHLME++FDER++KWHS
Sbjct: 23 VAGILSKNQGLRIREGRSRYNKIYEFNYSIRGQPCHMLMTSVTGHLMELDFDERYRKWHS 82
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDK DIK+TLE EAR CQWL+LWLDCDR
Sbjct: 83 CDPADLYHAPVRKHVPEDKKDIKKTLEEEARRCQWLVLWLDCDR 126
>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
vesca]
Length = 908
Score = 186 bits (471), Expect = 4e-45
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLRMREGRSR+NKI+EFNY+ING C M FTSVTGHLME+EF++RF+KWHS
Sbjct: 17 VANILSRGQGLRMREGRSRYNKIYEFNYSINGCHCQMLFTSVTGHLMELEFEDRFRKWHS 76
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP L+ AP+RK+VPEDKLDIKRTLE EARNCQWL+LWLDCDR
Sbjct: 77 CDPALLFQAPVRKFVPEDKLDIKRTLEEEARNCQWLVLWLDCDR 120
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
Length = 920
Score = 183 bits (464), Expect = 2e-44
Identities = 80/104 (76%), Positives = 92/104 (88%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+R+GRSR+N+IFEFNYTI G+PC M FTSV GHLME+EF++R++KWHS
Sbjct: 21 VANILSRNQGLRVRDGRSRYNRIFEFNYTIRGQPCHMLFTSVIGHLMELEFEDRYRKWHS 80
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK VPEDK DIKRTLE EAR CQWL+LWLDCDR
Sbjct: 81 CDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLWLDCDR 124
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 182 bits (462), Expect = 4e-44
Identities = 80/106 (75%), Positives = 97/106 (91%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 VAGILSRQQ--GLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKW 174
V+GILS+ Q G+R+R+GRSR+NKIFEFNYTI +PC M FTSVTGHLME+EFDER++KW
Sbjct: 24 VSGILSKNQPGGMRVRDGRSRYNKIFEFNYTIRNQPCQMLFTSVTGHLMELEFDERYRKW 83
Query: 175 HSCDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
HSCDP+ LY+AP+RK+VPEDKLDIKRTLE EAR+CQW++LWLDCDR
Sbjct: 84 HSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQWIVLWLDCDR 129
>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 182 bits (461), Expect = 5e-44
Identities = 80/104 (76%), Positives = 92/104 (88%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+REGRSR+NK+FEFNY+I G+ C M TSV GHLME+EF++RF+KWHS
Sbjct: 16 VATILSRNQGLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSVIGHLMELEFEDRFRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDKLDIKRTLE EAR CQWL+LWLDCDR
Sbjct: 76 CDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDR 119
>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
Length = 914
Score = 182 bits (461), Expect = 5e-44
Identities = 80/104 (76%), Positives = 92/104 (88%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+REGRSR+NK+FEFNY+I G+ C M TSV GHLME+EF++RF+KWHS
Sbjct: 16 VATILSRNQGLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSVIGHLMELEFEDRFRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LYHAP+RK+VPEDKLDIKRTLE EAR CQWL+LWLDCDR
Sbjct: 76 CDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDR 119
>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
Length = 910
Score = 181 bits (459), Expect = 9e-44
Identities = 82/106 (77%), Positives = 96/106 (90%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 VAGILSRQQ--GLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKW 174
V+GILS+ Q G+R+R+GRSR+NKIFEFNYTI +PC M FTSVTGHLMEIEF ER++KW
Sbjct: 24 VSGILSKNQPGGIRVRDGRSRYNKIFEFNYTIRNQPCQMLFTSVTGHLMEIEFHERYRKW 83
Query: 175 HSCDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
HSCDP+ LY+APIRK+VPEDKLDIKRTLE EAR+CQW+ILWLDCDR
Sbjct: 84 HSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQWIILWLDCDR 129
>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
Length = 885
Score = 181 bits (458), Expect = 1e-43
Identities = 80/103 (77%), Positives = 90/103 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR Q +RMREGRSR+NKIFEFNYTI G+PC M FTSVTGHLME+EFD+R++KWHS
Sbjct: 16 VATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHMIFTSVTGHLMELEFDDRYRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCD 309
CDP L+ AP+ K+VPEDK DIKRTLE EAR CQWLILWLDCD
Sbjct: 76 CDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCD 118
>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
Length = 910
Score = 181 bits (458), Expect = 1e-43
Identities = 80/103 (77%), Positives = 90/103 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR Q +RMREGRSR+NKIFEFNYTI G+PC M FTSVTGHLME+EFD+R++KWHS
Sbjct: 16 VATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHMIFTSVTGHLMELEFDDRYRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCD 309
CDP L+ AP+ K+VPEDK DIKRTLE EAR CQWLILWLDCD
Sbjct: 76 CDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCD 118
>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
topoisomerase 3-alpha isoform X2 [Glycine max]
Length = 913
Score = 181 bits (458), Expect = 1e-43
Identities = 80/103 (77%), Positives = 90/103 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR Q +RMREGRSR+NKIFEFNYTI G+PC M FTSVTGHLME+EFD+R++KWHS
Sbjct: 16 VATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHMIFTSVTGHLMELEFDDRYRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCD 309
CDP L+ AP+ K+VPEDK DIKRTLE EAR CQWLILWLDCD
Sbjct: 76 CDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCD 118
>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
DNA topoisomerase [Medicago truncatula]
Length = 587
Score = 179 bits (455), Expect = 3e-43
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+R+GRSR+N+IFEFNYTI G+PC M FTSV GHLME++FD+R++KWHS
Sbjct: 21 VASILSRNQGLRVRDGRSRYNRIFEFNYTIRGQPCQMLFTSVLGHLMELDFDDRYRKWHS 80
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP L+ AP+ K+VPEDK DIKRTLE EAR CQWLILWLDCDR
Sbjct: 81 CDPADLFQAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCDR 124
>gb|ESW09772.1| hypothetical protein PHAVU_009G154800g [Phaseolus vulgaris]
Length = 693
Score = 179 bits (454), Expect = 3e-43
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
V+ ILSR QG+R REGRSR+NKIFEFNYTI G+PC M FTSVTGHLME+EFDER++KWH+
Sbjct: 16 VSTILSRNQGIRTREGRSRYNKIFEFNYTIRGQPCHMLFTSVTGHLMELEFDERYRKWHA 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
C+P L+ AP+ K+VPEDK DIKRTLE EAR CQWL+LWLDCDR
Sbjct: 76 CNPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLVLWLDCDR 119
>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA
topoisomerase, putative [Ricinus communis]
Length = 833
Score = 178 bits (451), Expect = 7e-43
Identities = 82/106 (77%), Positives = 92/106 (86%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 VAGILSRQQ--GLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKW 174
VA ILSR Q GLR+REG+SR+NKIFEFNY ING+ C M TSVTGHLME+EFD+RF+KW
Sbjct: 17 VATILSRNQQHGLRVREGQSRYNKIFEFNYVINGQNCHMLVTSVTGHLMELEFDDRFRKW 76
Query: 175 HSCDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
HSCDP LYHAP+RK+VPEDK +IKRTLE EAR CQWLILWLDCDR
Sbjct: 77 HSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLDCDR 122
>gb|EMJ14258.1| hypothetical protein PRUPE_ppa020488mg, partial [Prunus persica]
Length = 542
Score = 176 bits (447), Expect = 2e-42
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VAGILS Q LRMREGRSR+NKI+EFNY+ING PC M TSVTGHLME+EF++RF+KWH+
Sbjct: 16 VAGILSGNQNLRMREGRSRYNKIYEFNYSINGLPCHMLVTSVTGHLMELEFEDRFRKWHA 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP L+ AP+RK+VP+DKLDIKRTLE AR CQWL+LWLDCDR
Sbjct: 76 CDPAVLFTAPVRKFVPQDKLDIKRTLEEVARGCQWLVLWLDCDR 119
>ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
Length = 607
Score = 176 bits (447), Expect = 2e-42
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+R+GRSR+NKIFEFNY I G+ C M TSVTGHLME+ F+ER++KWHS
Sbjct: 22 VATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNMIVTSVTGHLMELAFEERYRKWHS 81
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDPVQL+HAP+ K+VPEDKLDIKRTLE E+R QWL+LWLDCDR
Sbjct: 82 CDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVLWLDCDR 125
>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
Length = 925
Score = 176 bits (447), Expect = 2e-42
Identities = 78/104 (75%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR QGLR+R+GRSR+NKIFEFNY I G+ C M TSVTGHLME+ F+ER++KWHS
Sbjct: 22 VATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNMIVTSVTGHLMELAFEERYRKWHS 81
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDPVQL+HAP+ K+VPEDKLDIKRTLE E+R QWL+LWLDCDR
Sbjct: 82 CDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVLWLDCDR 125
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 175 bits (444), Expect = 5e-42
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +1
Query: 1 VAGILSRQQGLRMREGRSRFNKIFEFNYTINGRPCLMSFTSVTGHLMEIEFDERFKKWHS 180
VA ILSR Q LR+R+GRSR+NKIFEFNY+ING+ C M TSVTGHLME+EF++RF+KWHS
Sbjct: 17 VATILSRNQ-LRVRDGRSRYNKIFEFNYSINGQQCHMLVTSVTGHLMEVEFEDRFRKWHS 75
Query: 181 CDPVQLYHAPIRKYVPEDKLDIKRTLENEARNCQWLILWLDCDR 312
CDP LY AP+RKYVPEDKLDIKRTLE EAR C WL+LWLDCDR
Sbjct: 76 CDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCDR 119