BLASTX nr result
ID: Catharanthus23_contig00039943
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00039943
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein ... 195 4e-48
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 195 4e-48
gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [... 195 6e-48
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 195 6e-48
ref|XP_004969083.1| PREDICTED: chlorophyll a-b binding protein 2... 194 1e-47
gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaen... 193 2e-47
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 192 3e-47
gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyl... 192 4e-47
gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b bind... 192 4e-47
ref|XP_004961193.1| PREDICTED: chlorophyll a-b binding protein M... 191 6e-47
gb|AFI60242.1| light harvesting chlorophyll a/b binding protein,... 191 6e-47
gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Cana... 191 6e-47
emb|CAH59405.1| light harvesting protein 1 [Plantago major] 191 8e-47
ref|XP_002515206.1| chlorophyll A/B binding protein, putative [R... 191 8e-47
gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [... 191 1e-46
sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding pro... 191 1e-46
ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [S... 191 1e-46
gb|ACN31249.1| unknown [Zea mays] 191 1e-46
gb|ACF84273.1| unknown [Zea mays] gi|195619060|gb|ACG31360.1| ch... 191 1e-46
gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyl... 190 1e-46
>gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein 1-1 [Dendrocalamus
latiflorus]
Length = 265
Score = 195 bits (496), Expect = 4e-48
Identities = 87/96 (90%), Positives = 92/96 (95%)
Frame = +2
Query: 2 GGRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G +PKPAS SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 38 GAKPKPASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKA
Sbjct: 98 EVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 133
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 195 bits (496), Expect = 4e-48
Identities = 89/97 (91%), Positives = 93/97 (95%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 GGRPKPASA-SPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 178
GGRPKP S+ SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 39 GGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 98
Query: 179 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
LEVIH RWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 99 LEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
>gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 195 bits (495), Expect = 6e-48
Identities = 87/96 (90%), Positives = 92/96 (95%)
Frame = +2
Query: 2 GGRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
GG+P +S SPWYGPDRVKYLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 38 GGKPAASSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIH RWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 195 bits (495), Expect = 6e-48
Identities = 89/96 (92%), Positives = 93/96 (96%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 GRPKPASA-SPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
GRPKP S+ SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 40 GRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 100 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
>ref|XP_004969083.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Setaria italica]
Length = 265
Score = 194 bits (492), Expect = 1e-47
Identities = 89/97 (91%), Positives = 93/97 (95%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 GGRPKPA-SASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 178
G +PKPA S SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 GAKPKPAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 179 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
LEVIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 97 LEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
>gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaenopsis hybrid
cultivar]
Length = 277
Score = 193 bits (491), Expect = 2e-47
Identities = 85/95 (89%), Positives = 93/95 (97%)
Frame = +2
Query: 5 GRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 184
G+ +PA++SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 51 GKLRPATSSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 110
Query: 185 VIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
VIHSRWAMLGALGC+FPE+LA+NGVKFGEAVWFKA
Sbjct: 111 VIHSRWAMLGALGCIFPELLARNGVKFGEAVWFKA 145
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 192 bits (489), Expect = 3e-47
Identities = 87/96 (90%), Positives = 93/96 (96%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 GRPKPASA-SPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G+PKP S+ SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 40 GKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKA
Sbjct: 100 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 135
>gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 192 bits (488), Expect = 4e-47
Identities = 86/96 (89%), Positives = 91/96 (94%)
Frame = +2
Query: 2 GGRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G +PK S SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 38 GAKPKATSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+LA+NGV+FGEAVWFKA
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVQFGEAVWFKA 133
>gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Bambusa oldhamii]
Length = 265
Score = 192 bits (488), Expect = 4e-47
Identities = 87/96 (90%), Positives = 91/96 (94%)
Frame = +2
Query: 2 GGRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G +PK AS SPWYGPDRV YLGPLSG+PPSYLTGEF GDYGWDTAGLSADPETFAKNREL
Sbjct: 38 GAKPKAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAKNREL 97
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
>ref|XP_004961193.1| PREDICTED: chlorophyll a-b binding protein M9, chloroplastic-like
[Setaria italica]
Length = 264
Score = 191 bits (486), Expect = 6e-47
Identities = 88/95 (92%), Positives = 92/95 (96%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 RPKPA-SASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 184
+PKPA S SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 38 KPKPAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
Query: 185 VIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
VIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 98 VIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
>gb|AFI60242.1| light harvesting chlorophyll a/b binding protein, partial [Panicum
virgatum]
Length = 260
Score = 191 bits (486), Expect = 6e-47
Identities = 88/95 (92%), Positives = 92/95 (96%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 RPKPA-SASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 184
+PKPA S SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 34 KPKPAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 93
Query: 185 VIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
VIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 94 VIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 128
>gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 191 bits (486), Expect = 6e-47
Identities = 86/92 (93%), Positives = 89/92 (96%)
Frame = +2
Query: 14 KPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 193
KP S SPWYGPDRVKYLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 41 KPPSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 100
Query: 194 SRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
RWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 101 CRWAMLGALGCVFPELLARNGVKFGEAVWFKA 132
>emb|CAH59405.1| light harvesting protein 1 [Plantago major]
Length = 229
Score = 191 bits (485), Expect = 8e-47
Identities = 87/96 (90%), Positives = 93/96 (96%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 GRPKP-ASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G+PKP +S+SPWYGPDRVKYLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 2 GKPKPVSSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 62 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 97
>ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 267
Score = 191 bits (485), Expect = 8e-47
Identities = 85/95 (89%), Positives = 90/95 (94%)
Frame = +2
Query: 5 GRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 184
G+P +S SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 41 GKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100
Query: 185 VIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
VIH RWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 101 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135
>gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii]
Length = 267
Score = 191 bits (484), Expect = 1e-46
Identities = 88/95 (92%), Positives = 92/95 (96%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 RPKP-ASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 184
+PKP AS+SPWYGPDRVKYLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 41 KPKPSASSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100
Query: 185 VIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
VIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKA
Sbjct: 101 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 135
>sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor gi|22224|emb|CAA32900.1| unnamed protein
product [Zea mays] gi|194699340|gb|ACF83754.1| unknown
[Zea mays] gi|195607416|gb|ACG25538.1| chlorophyll a-b
binding protein 2 [Zea mays] gi|195613460|gb|ACG28560.1|
chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting
chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 191 bits (484), Expect = 1e-46
Identities = 87/96 (90%), Positives = 92/96 (95%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 GRPK-PASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G+PK AS SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 35 GKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 94
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKA
Sbjct: 95 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 130
>ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
gi|241945548|gb|EES18693.1| hypothetical protein
SORBIDRAFT_09g028720 [Sorghum bicolor]
Length = 265
Score = 191 bits (484), Expect = 1e-46
Identities = 86/94 (91%), Positives = 90/94 (95%)
Frame = +2
Query: 8 RPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 187
+P AS SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Sbjct: 40 KPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 99
Query: 188 IHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
IHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 100 IHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 133
>gb|ACN31249.1| unknown [Zea mays]
Length = 233
Score = 191 bits (484), Expect = 1e-46
Identities = 87/96 (90%), Positives = 92/96 (95%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 GRPK-PASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G+PK AS SPWYGPDRVKYLGP SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 6 GKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 65
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKA
Sbjct: 66 EVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 101
>gb|ACF84273.1| unknown [Zea mays] gi|195619060|gb|ACG31360.1| chlorophyll a-b
binding protein 2 [Zea mays]
Length = 266
Score = 191 bits (484), Expect = 1e-46
Identities = 86/94 (91%), Positives = 90/94 (95%)
Frame = +2
Query: 8 RPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 187
+P AS SPWYGPDRV YLGPLSG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Sbjct: 41 KPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 100
Query: 188 IHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
IHSRWAMLGALGCVFPE+LA+NGVKFGEAVWFKA
Sbjct: 101 IHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134
>gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 190 bits (483), Expect = 1e-46
Identities = 86/96 (89%), Positives = 91/96 (94%)
Frame = +2
Query: 2 GGRPKPASASPWYGPDRVKYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 181
G +PK AS SPWYGPDRV YLGPLSG+PPSYLTGEF GDYGWDTAGLSADPETFAKNREL
Sbjct: 38 GAKPKVASGSPWYGPDRVLYLGPLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAKNREL 97
Query: 182 EVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKA 289
EVIHSRWAMLGALGCVFPE+LA+NGV+FGEAVWFKA
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVQFGEAVWFKA 133