BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039878
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   127   2e-27
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   127   2e-27
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   126   3e-27
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   125   6e-27
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   125   8e-27
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   125   8e-27
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   125   8e-27
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   124   1e-26
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   124   1e-26
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   124   1e-26
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   123   3e-26
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   123   3e-26
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   123   3e-26
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   122   4e-26
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]   120   2e-25
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   120   2e-25
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   120   2e-25
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   118   9e-25
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   118   9e-25
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   117   1e-24

>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/95 (62%), Positives = 70/95 (73%)
 Frame = +3

Query: 6   NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
           NW + QMDVHN FLHG L+ EVY++ P GF  S    VC L+KSLYGL QAPRCWFSKL 
Sbjct: 691 NWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLV 750

Query: 186 AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            AL+ YGF Q Y+DYS+FTY   N+ + VL+YVDD
Sbjct: 751 TALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDD 785


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/95 (62%), Positives = 70/95 (73%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN FLHG L+ EVY++ P GF  S    VC L+KSLYGL QAPRCWFSKL 
Sbjct: 770  NWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKLV 829

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL+ YGF Q Y+DYS+FTY   N+ + VL+YVDD
Sbjct: 830  TALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDD 864


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  126 bits (317), Expect = 3e-27
 Identities = 58/95 (61%), Positives = 71/95 (74%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN FLHG L+ EVY++ P GF  S    VC L+KSLYGL QAPRCWF+KL 
Sbjct: 1053 NWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKLV 1112

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL+ YGF Q Y+DYS+FTY + N+ + VL+YVDD
Sbjct: 1113 TALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDD 1147


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  125 bits (314), Expect = 6e-27
 Identities = 57/95 (60%), Positives = 71/95 (74%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW I QMDVHN FLHG L+ EVY++ P GF  S   +VC L+K+LYGL QAPRCWF KLT
Sbjct: 925  NWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLT 984

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL++YGF Q  ADYS+FT  + ++ + +LIYVDD
Sbjct: 985  TALKRYGFQQSLADYSLFTLVKGSVRIKILIYVDD 1019


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  125 bits (313), Expect = 8e-27
 Identities = 57/95 (60%), Positives = 71/95 (74%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN FLHG L+ EVY++ P GF  S    VC L+KSLYGL QAPRCWF+KL 
Sbjct: 1053 NWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLV 1112

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL+ YGF Q Y++YS+FTY + N+ + VL+YVDD
Sbjct: 1113 TALKGYGFLQSYSNYSLFTYTKGNVQINVLVYVDD 1147


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  125 bits (313), Expect = 8e-27
 Identities = 58/95 (61%), Positives = 70/95 (73%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN FLHG L+ EVY++ P GF  S    VC L KSLYGL QAPRCWF+KL 
Sbjct: 721  NWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKLV 780

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL+ YGF Q Y+DYS+FTY + N+ + VL+YVDD
Sbjct: 781  TALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDD 815


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  125 bits (313), Expect = 8e-27
 Identities = 57/95 (60%), Positives = 73/95 (76%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            +W + QMDVHN FLHG LK EVY++ P GF      +VC L KSLYGL QAPRCWFSKL+
Sbjct: 1060 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLS 1119

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            +AL++YGF+Q  +DYS+F+Y  + IF+ VL+YVDD
Sbjct: 1120 SALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDD 1154


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  124 bits (312), Expect = 1e-26
 Identities = 56/95 (58%), Positives = 73/95 (76%)
 Frame = +3

Query: 6   NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
           +W + QMDVHN FLHG LK EVY++ P GF      +VC L KSLYGL QAPRCWFSKL+
Sbjct: 701 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLS 760

Query: 186 AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
           +AL++YGF+Q  +DYS+F+Y  + +F+ VL+YVDD
Sbjct: 761 SALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDD 795


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  124 bits (312), Expect = 1e-26
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN F HG L+ EVY++ P GF  S    VC L+KSLYGL QAPRCWF+KL 
Sbjct: 765  NWELHQMDVHNAFSHGDLEEEVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKLV 824

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL+ YGF Q Y+DYS+FTY + N+ + VL+YVDD
Sbjct: 825  TALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDD 859


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  124 bits (312), Expect = 1e-26
 Identities = 56/95 (58%), Positives = 73/95 (76%)
 Frame = +3

Query: 6   NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
           +W + QMDVHN FLHG LK EVY++ P GF      +VC L KSLYGL QAPRCWFSKL+
Sbjct: 701 DWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLS 760

Query: 186 AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
           +AL++YGF+Q  +DYS+F+Y  + +F+ VL+YVDD
Sbjct: 761 SALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDD 795


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  123 bits (308), Expect = 3e-26
 Identities = 55/95 (57%), Positives = 72/95 (75%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            +W + QMDVHN FLHG L  EVY++ P GF    + +VC L+KSLYGL QAPRCWF+KLT
Sbjct: 1078 DWEVHQMDVHNAFLHGDLDEEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLT 1137

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            +AL+ YGF Q  +DYS+F +++N + L VL+YVDD
Sbjct: 1138 SALKNYGFIQDISDYSLFIFHKNGVRLHVLVYVDD 1172


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  123 bits (308), Expect = 3e-26
 Identities = 56/95 (58%), Positives = 69/95 (72%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            NW + QMDVHN FLHG L+ EVY++ P GF       VC L+KSLYGL QAPRCWF+KL 
Sbjct: 897  NWELHQMDVHNAFLHGDLEEEVYMKLPPGFESXDPNLVCRLRKSLYGLKQAPRCWFAKLV 956

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
              L+ YGF Q Y+DYS+FTY + N+ + VL+YVDD
Sbjct: 957  TXLKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDD 991


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  123 bits (308), Expect = 3e-26
 Identities = 58/94 (61%), Positives = 71/94 (75%)
 Frame = +3

Query: 9    WPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLTA 188
            W + QMDVHN FLHG L+ EVY++ P GF  S   +VC L+KSLYGL QAPRCWF KL+ 
Sbjct: 1094 WEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSD 1153

Query: 189  ALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            +L ++GF Q Y DYS+F+Y +NNI L VLIYVDD
Sbjct: 1154 SLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDD 1187


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/95 (60%), Positives = 69/95 (72%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            +W + QMDVHN FLHG L  EVYI+ P GF     R+VC L+K+LYGL QAPRCWF+KLT
Sbjct: 1040 DWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNRKVCRLRKALYGLKQAPRCWFAKLT 1099

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             AL  YGF Q  +DYS+FT  +N I L +L+YVDD
Sbjct: 1100 TALNDYGFIQDISDYSLFTMERNGIRLHILVYVDD 1134


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/94 (59%), Positives = 66/94 (70%)
 Frame = +3

Query: 9    WPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLTA 188
            W + QMDVHN FLHG L  EVY++   GF      +VC L+KSLYGL QAP+CWF+KL A
Sbjct: 795  WELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKSLYGLQQAPKCWFAKLVA 854

Query: 189  ALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            AL  YGF Q Y DYS+FTY   +I L VL+YVDD
Sbjct: 855  ALTSYGFKQSYLDYSLFTYEAQHIQLNVLVYVDD 888


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/95 (58%), Positives = 69/95 (72%)
 Frame = +3

Query: 6    NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
            +W + QMDVHN FLHG L+ EVY+R P GF  S   +VC L+KSLYGL QAPRCWFSKL+
Sbjct: 1088 DWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLS 1147

Query: 186  AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
             ALR  GF+Q Y DYS+F+    +  + VL+YVDD
Sbjct: 1148 TALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDD 1182


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
           At2g23330 [Arabidopsis thaliana]
           gi|110742535|dbj|BAE99183.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/95 (58%), Positives = 69/95 (72%)
 Frame = +3

Query: 6   NWPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLT 185
           +W + QMDVHN FLHG L+ EVY+R P GF  S   +VC L+KSLYGL QAPRCWFSKL+
Sbjct: 368 DWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLS 427

Query: 186 AALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            ALR  GF+Q Y DYS+F+    +  + VL+YVDD
Sbjct: 428 TALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDD 462


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  118 bits (295), Expect = 9e-25
 Identities = 56/94 (59%), Positives = 68/94 (72%)
 Frame = +3

Query: 9    WPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLTA 188
            W + QMDVHN FLHG L+ EVY++ P GF  S   +VC L+KSLYGL QAPRCWF KL+ 
Sbjct: 1084 WEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSD 1143

Query: 189  ALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            AL+++GF Q Y DYS F+Y    I L VL+YVDD
Sbjct: 1144 ALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDD 1177


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  118 bits (295), Expect = 9e-25
 Identities = 56/94 (59%), Positives = 68/94 (72%)
 Frame = +3

Query: 9    WPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLTA 188
            W + QMDVHN FLHG L+ EVY++ P GF  S   +VC L+KSLYGL QAPRCWF KL+ 
Sbjct: 1084 WEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSD 1143

Query: 189  ALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            AL+++GF Q Y DYS F+Y    I L VL+YVDD
Sbjct: 1144 ALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDD 1177


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  117 bits (294), Expect = 1e-24
 Identities = 54/94 (57%), Positives = 71/94 (75%)
 Frame = +3

Query: 9    WPIQQMDVHNVFLHGYLKNEVYIRPPTGFCPSVRRQVCLLKKSLYGLHQAPRCWFSKLTA 188
            W + QMDV+N FLHG L+ EVY++ P GF  + + +VC L+KSLYGL QA R WF+KLT 
Sbjct: 909  WELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLTT 968

Query: 189  ALRKYGFSQFYADYSIFTYYQNNIFLCVLIYVDD 290
            AL++YGF Q  ADYS+FTY + NI + +L+YVDD
Sbjct: 969  ALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDD 1002