BLASTX nr result
ID: Catharanthus23_contig00039754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00039754
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containi... 151 1e-34
ref|XP_006444275.1| hypothetical protein CICLE_v10020732mg [Citr... 151 1e-34
ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33
ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containi... 145 7e-33
gb|EOX95012.1| Pentatricopeptide repeat superfamily protein [The... 140 2e-31
ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containi... 139 4e-31
gb|EXB40832.1| hypothetical protein L484_009077 [Morus notabilis] 139 5e-31
ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi... 139 5e-31
gb|ESW35082.1| hypothetical protein PHAVU_001G205100g [Phaseolus... 137 1e-30
ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containi... 132 6e-29
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ... 130 2e-28
ref|XP_002531869.1| pentatricopeptide repeat-containing protein,... 130 2e-28
ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Popu... 126 3e-27
gb|EMT18425.1| Formamidase [Aegilops tauschii] 124 2e-26
ref|XP_004972185.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_002458547.1| hypothetical protein SORBIDRAFT_03g035530 [S... 119 4e-25
gb|EEE55431.1| hypothetical protein OsJ_03567 [Oryza sativa Japo... 118 9e-25
>ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Citrus sinensis]
Length = 466
Score = 151 bits (381), Expect = 1e-34
Identities = 72/100 (72%), Positives = 84/100 (84%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM GVEPNRVTMVNAL+ACAS GA +GVWIH+ ++R+ WK+DVILGT+LIDM
Sbjct: 197 LISFEQMQYAGVEPNRVTMVNALAACASFGAAEMGVWIHDSIRRKGWKVDVILGTALIDM 256
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E GL VFQ M+EKNV TWNA+IKGLALAK+GHE
Sbjct: 257 YGKCGRIEQGLNVFQGMKEKNVFTWNAVIKGLALAKSGHE 296
>ref|XP_006444275.1| hypothetical protein CICLE_v10020732mg [Citrus clementina]
gi|557546537|gb|ESR57515.1| hypothetical protein
CICLE_v10020732mg [Citrus clementina]
Length = 365
Score = 151 bits (381), Expect = 1e-34
Identities = 72/100 (72%), Positives = 84/100 (84%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM GVEPNRVTMVNAL+ACAS GA +GVWIH+ ++R+ WK+DVILGT+LIDM
Sbjct: 96 LISFEQMQYAGVEPNRVTMVNALAACASFGAAEMGVWIHDSIRRKGWKVDVILGTALIDM 155
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E GL VFQ M+EKNV TWNA+IKGLALAK+GHE
Sbjct: 156 YGKCGRIEQGLNVFQGMKEKNVFTWNAVIKGLALAKSGHE 195
>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 145 bits (367), Expect = 4e-33
Identities = 70/100 (70%), Positives = 82/100 (82%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM GV PN VTMVNALSACA GAL +GVWIHEF++R W+ DVILGTSLIDM
Sbjct: 195 LIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFIRRSGWEFDVILGTSLIDM 254
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+GL VF++M+EKNV TWN+LIKGLALA++G E
Sbjct: 255 YGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAE 294
>ref|XP_004494357.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cicer arietinum]
Length = 468
Score = 145 bits (365), Expect = 7e-33
Identities = 68/100 (68%), Positives = 84/100 (84%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
LFVFEQM GV PNRVTMVNAL+ACA+SGA+ +G+WI + ++R W+LDVILGT+LIDM
Sbjct: 196 LFVFEQMQYAGVVPNRVTMVNALAACANSGAVEMGIWIEDMIRRNGWELDVILGTALIDM 255
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
Y GR+E+GL+VF M+EKNV TWNA+IKGLALAK+G E
Sbjct: 256 YVKCGRIEEGLRVFSNMKEKNVFTWNAVIKGLALAKSGEE 295
>gb|EOX95012.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 456
Score = 140 bits (353), Expect = 2e-31
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM GV PNRVTMVNAL+AC S GA +GVWIH+F+ ++ W+LD+ILGT+LIDM
Sbjct: 180 LIAFEQMQYAGVVPNRVTMVNALAACGSFGATEMGVWIHDFITKKGWELDLILGTALIDM 239
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+GL+VF M+EKN TWNA+I GLALAKNG +
Sbjct: 240 YGKCGRIEEGLRVFHNMKEKNNFTWNAVINGLALAKNGEQ 279
>ref|XP_006604717.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 464
Score = 139 bits (350), Expect = 4e-31
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFEQM G PNRVTM+NAL ACA SG +++G WIH +KR W+LDV+LGT+LIDM
Sbjct: 192 LVVFEQMQYAGFVPNRVTMINALHACAHSGNVDMGAWIHGVIKREGWELDVVLGTALIDM 251
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+GL VF++M+EKNV TWN +IKGLALAK+G E
Sbjct: 252 YGKCGRVEEGLNVFRSMKEKNVFTWNTVIKGLALAKSGQE 291
>gb|EXB40832.1| hypothetical protein L484_009077 [Morus notabilis]
Length = 368
Score = 139 bits (349), Expect = 5e-31
Identities = 67/100 (67%), Positives = 84/100 (84%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFE+M GV PNRVTMVNAL+ACA+SGAL +GVWIH+F++R +LDV LGTSLIDM
Sbjct: 96 LVVFERMQYAGVVPNRVTMVNALAACANSGALEMGVWIHDFVRREGLELDVRLGTSLIDM 155
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+GL VF++M+E+N TWNA+I+GLALAK+G E
Sbjct: 156 YGKCGRIEEGLAVFRSMKERNSFTWNAVIQGLALAKSGKE 195
>ref|XP_004290764.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 466
Score = 139 bits (349), Expect = 5e-31
Identities = 68/100 (68%), Positives = 77/100 (77%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM GV PN VTMVNAL+ACAS GAL +GVWIHE ++R W+LDV LGT+LIDM
Sbjct: 193 LIAFEQMQYAGVAPNAVTMVNALAACASFGALEMGVWIHECIRREGWELDVKLGTALIDM 252
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+ L VF MEEKN TWNALIKG ALAK+G E
Sbjct: 253 YGTCGRIEEALVVFDGMEEKNTFTWNALIKGFALAKSGEE 292
>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 139 bits (349), Expect = 5e-31
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFEQM GV+PNRVT+VNAL+ACAS GA+ +GVWIHEF+K + W++DV+LGT+LIDM
Sbjct: 196 LIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTALIDM 255
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+++ L VFQ M+EKNV TWN I GLA AK G E
Sbjct: 256 YGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEE 295
>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 139 bits (349), Expect = 5e-31
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFEQM GV+PNRVT+VNAL+ACAS GA+ +GVWIHEF+K + W++DV+LGT+LIDM
Sbjct: 196 LIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFVKTKRWEVDVVLGTALIDM 255
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+++ L VFQ M+EKNV TWN I GLA AK G E
Sbjct: 256 YGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEE 295
>gb|ESW35082.1| hypothetical protein PHAVU_001G205100g [Phaseolus vulgaris]
Length = 463
Score = 137 bits (346), Expect = 1e-30
Identities = 63/100 (63%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFEQM G PNRVTM+NAL ACA SG + +G WIH +KR W+LDVILGT+L+DM
Sbjct: 191 LVVFEQMQYAGCVPNRVTMINALHACAHSGNVEMGTWIHGVVKREGWELDVILGTALVDM 250
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG GR+E+G++VF +M+E+NV TWNA++KGLALAK+G E
Sbjct: 251 YGKCGRLEEGVRVFWSMKERNVFTWNAVVKGLALAKSGQE 290
>ref|XP_006343635.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum tuberosum]
Length = 476
Score = 134 bits (336), Expect = 2e-29
Identities = 65/100 (65%), Positives = 81/100 (81%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFE+M GV PNRVTMVNALSACA+ GAL++GV IH+ ++R W++DVILGTSLIDM
Sbjct: 204 LVVFEKMRDSGVAPNRVTMVNALSACANCGALDMGVLIHDEIRRSGWEMDVILGTSLIDM 263
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG G++E G VFQ M+ +NV TWNA+I+GLALAK+G E
Sbjct: 264 YGKCGKIEHGFWVFQEMKHRNVYTWNAVIRGLALAKSGEE 303
>ref|XP_004242986.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum lycopersicum]
Length = 476
Score = 132 bits (331), Expect = 6e-29
Identities = 64/100 (64%), Positives = 80/100 (80%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFE+M GV PNRVTMVNALSACA+ GAL++G+ IH+ ++R W +DVILGTSLIDM
Sbjct: 204 LVVFEKMKDSGVAPNRVTMVNALSACANCGALDMGMLIHDEIRRSGWAMDVILGTSLIDM 263
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
YG G++E G VFQ M+ +NV TWNA+I+GLALAK+G E
Sbjct: 264 YGKCGKIEHGFWVFQEMKHRNVYTWNAVIRGLALAKSGEE 303
>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500915|gb|AES82118.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 467
Score = 130 bits (327), Expect = 2e-28
Identities = 67/100 (67%), Positives = 79/100 (79%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L VFEQM GV PNRVTMVNALSACASS A+ +GVWI + ++R W+LDVILGT+LIDM
Sbjct: 195 LLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDM 254
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
Y GR+E+GLKVF M+EKNV T N +IKGLALAK+ E
Sbjct: 255 YVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEE 294
>ref|XP_002531869.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528477|gb|EEF30506.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 242
Score = 130 bits (326), Expect = 2e-28
Identities = 58/100 (58%), Positives = 75/100 (75%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FEQM G+ PN VTMVN L ACA GA+ +G+WIH+F++R W++DVILGTSLIDM
Sbjct: 26 LIAFEQMQYAGIVPNHVTMVNVLGACARFGAIEMGIWIHDFIRRSGWEIDVILGTSLIDM 85
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
Y G++ + L VF++M+EKN+ WNA+IKGLA AK G E
Sbjct: 86 YAKCGKINESLSVFRSMKEKNIFAWNAVIKGLAFAKCGQE 125
>ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Populus trichocarpa]
gi|550324072|gb|EEE98668.2| hypothetical protein
POPTR_0014s12660g [Populus trichocarpa]
Length = 410
Score = 126 bits (316), Expect = 3e-27
Identities = 58/100 (58%), Positives = 74/100 (74%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L FE+M GV PN VTMVNAL AC S A+ +GVWIH+F+ R W LDVILGTSL++M
Sbjct: 196 LIAFEKMQYAGVVPNHVTMVNALGACGSFRAIEMGVWIHDFISRNGWDLDVILGTSLVEM 255
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNGHE 301
Y GR+++GL F++M+EKNV TWN +I+GL AK+G E
Sbjct: 256 YLKCGRIDEGLNAFRSMKEKNVFTWNVVIQGLGFAKSGQE 295
>gb|EMT18425.1| Formamidase [Aegilops tauschii]
Length = 846
Score = 124 bits (310), Expect = 2e-26
Identities = 56/98 (57%), Positives = 75/98 (76%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L F +MLS V PNRVTMV AL ACA+ GA+ G WIHE+++++ W+LDVILGT+L+DM
Sbjct: 26 LATFRRMLSASVAPNRVTMVAALGACAAHGAIETGTWIHEYVQKQEWELDVILGTALVDM 85
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNG 295
YG G + DG++VF M E+NV TWN++I LALA++G
Sbjct: 86 YGKCGHVVDGVRVFSEMAERNVYTWNSIIGALALAQDG 123
>ref|XP_004972185.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Setaria italica]
Length = 443
Score = 120 bits (300), Expect = 2e-25
Identities = 53/98 (54%), Positives = 74/98 (75%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L F M V PNRVTMV+AL ACA+ GALN G+WIH++++++ W+LDV+LGT+L+DM
Sbjct: 164 LAAFRWMSVASVAPNRVTMVSALGACAAHGALNTGIWIHQYVQKQGWELDVVLGTALVDM 223
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNG 295
YG G + +G +VF M E+NV TWN++I LALA++G
Sbjct: 224 YGKCGHIAEGARVFSEMVERNVYTWNSIIGALALAQDG 261
>ref|XP_002458547.1| hypothetical protein SORBIDRAFT_03g035530 [Sorghum bicolor]
gi|241930522|gb|EES03667.1| hypothetical protein
SORBIDRAFT_03g035530 [Sorghum bicolor]
Length = 483
Score = 119 bits (298), Expect = 4e-25
Identities = 50/98 (51%), Positives = 75/98 (76%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L F +M + V PNRVTMV+AL ACA+ GA++ G+WIH++++++ W+LDV+LGT+L+DM
Sbjct: 205 LSTFRRMFAASVAPNRVTMVSALGACAAHGAVDTGIWIHQYVQKQGWELDVVLGTALVDM 264
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNG 295
YG G + +G++VF M E+NV TWN++I AL +NG
Sbjct: 265 YGKCGHVVEGVRVFSEMTERNVCTWNSIIGAFALEQNG 302
>gb|EEE55431.1| hypothetical protein OsJ_03567 [Oryza sativa Japonica Group]
Length = 309
Score = 118 bits (295), Expect = 9e-25
Identities = 51/98 (52%), Positives = 76/98 (77%)
Frame = +2
Query: 2 LFVFEQMLSVGVEPNRVTMVNALSACASSGALNVGVWIHEFMKRRAWKLDVILGTSLIDM 181
L F +ML+ V PNRVTMV AL ACA+ A++ G+WIHE+++++ W++DV+LGT+L+DM
Sbjct: 30 LATFRRMLAAHVAPNRVTMVAALGACAAHCAVDTGIWIHEYVQKQGWEMDVVLGTALVDM 89
Query: 182 YGMNGRMEDGLKVFQTMEEKNVLTWNALIKGLALAKNG 295
YG G++ DG+ VF M ++NV TWN++I LALA++G
Sbjct: 90 YGKCGKVSDGMHVFSKMAKRNVYTWNSIIGALALAQDG 127