BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039747
         (257 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus pe...   100   3e-19
ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containi...    99   7e-19
gb|EMJ17399.1| hypothetical protein PRUPE_ppa016055mg, partial [...    91   1e-16
ref|XP_006364943.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protei...    83   4e-14
ref|XP_003593920.1| Pentatricopeptide repeat-containing protein ...    82   6e-14
ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    82   9e-14
ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Caps...    76   4e-12
ref|XP_002522400.1| pentatricopeptide repeat-containing protein,...    75   9e-12
ref|XP_002890625.1| pentatricopeptide repeat-containing protein ...    75   1e-11
ref|XP_006415976.1| hypothetical protein EUTSA_v10009468mg [Eutr...    74   2e-11
ref|NP_174012.1| pentatricopeptide repeat-containing protein [Ar...    72   1e-10
emb|CBI31981.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_006493241.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006436884.1| hypothetical protein CICLE_v10031246mg [Citr...    59   9e-07
ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citr...    57   2e-06

>gb|EMJ23502.1| hypothetical protein PRUPE_ppa003920mg [Prunus persica]
          Length = 540

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/84 (52%), Positives = 62/84 (73%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL+HFYC+  ++++AH+LFDEF  G D++SWNTLMGGYL VSQ  V++D F+Q+  S F
Sbjct: 113 NTLLHFYCISSKMEDAHKLFDEFPQGNDLISWNTLMGGYLHVSQPQVIVDLFKQMCRSGF 172

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
           +    T+L +LSA G+L    GG+
Sbjct: 173 EASVTTVLNLLSAIGDLGSYLGGE 196


>ref|XP_004298437.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 571

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 47/84 (55%), Positives = 59/84 (70%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL+HFYCV G+I++AH LFDEF    D+VSWNTLMGGYL VSQ  V++D FRQ+    F
Sbjct: 155 NTLLHFYCVSGKIEDAHHLFDEFPHRNDLVSWNTLMGGYLHVSQPRVIVDLFRQMCRGGF 214

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
                ++L +LSA GEL    GG+
Sbjct: 215 QASVTSVLHLLSAIGELGSYLGGE 238


>gb|EMJ17399.1| hypothetical protein PRUPE_ppa016055mg, partial [Prunus persica]
          Length = 369

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/84 (51%), Positives = 61/84 (72%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL+HFYC+  +I++AH+LFDEF  G D++SWNTLM GYL VSQ  V++D F+++  S F
Sbjct: 1   NTLLHFYCISRKIEDAHKLFDEFPQGNDLISWNTLM-GYLHVSQPQVIVDLFKKMCRSCF 59

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
           +    T+L +LSA G+L    GG+
Sbjct: 60  EASVTTVLNLLSAIGDLGSYLGGE 83


>ref|XP_006364943.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Solanum tuberosum]
          Length = 591

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 46/77 (59%), Positives = 54/77 (70%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL++FYCV G I+ AHQLFDEFS  +D+VSWNTLMGGYLCV  Y  V+D F +L     
Sbjct: 165 NTLLNFYCVCGGIRCAHQLFDEFST-RDLVSWNTLMGGYLCVRDYSAVLDMFVELRRDGI 223

Query: 73  DIGKATILTVLSAAGEL 23
                T+L VLSA GEL
Sbjct: 224 SASVTTMLCVLSAIGEL 240


>ref|XP_004228842.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 544

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/77 (58%), Positives = 54/77 (70%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL++FYCV G I+ AH+LFDE S  +D+VSWNTLMGGYLCVS Y  V+D F +L     
Sbjct: 113 NTLLNFYCVCGGIRCAHKLFDEISK-RDLVSWNTLMGGYLCVSNYSAVLDMFVELRRDGI 171

Query: 73  DIGKATILTVLSAAGEL 23
                T+L VLSA GEL
Sbjct: 172 YASVTTMLCVLSAIGEL 188


>gb|EOY01970.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 592

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 45/84 (53%), Positives = 52/84 (61%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+H Y V GRI  AH LFDE     D+VSWN+LMGGYL VS+  VVI  FR++ CS  
Sbjct: 162 NALLHLYSVCGRIFYAHTLFDEIPEANDVVSWNSLMGGYLHVSKPDVVIALFREMCCSCL 221

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
                T LTVLSA GE     GG+
Sbjct: 222 TASVPTFLTVLSAVGEAGDSLGGQ 245


>ref|XP_003593920.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482968|gb|AES64171.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 801

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/85 (48%), Positives = 53/85 (62%)
 Frame = -2

Query: 256 NNTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSD 77
           NNT++ FYCV GRI +A ++FDE     D+VSWN LMGG + VS Y  V D F +  CS 
Sbjct: 147 NNTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSG 206

Query: 76  FDIGKATILTVLSAAGELNCIPGGK 2
                AT L++LSAAG++     GK
Sbjct: 207 IRASVATTLSLLSAAGDIGSFVLGK 231


>ref|XP_004486021.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g26900, mitochondrial-like [Cicer arietinum]
          Length = 580

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 41/85 (48%), Positives = 57/85 (67%)
 Frame = -2

Query: 256 NNTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSD 77
           NNTL+HFY V  RI++AH++FDEF    D+VSWN LMGG L VS+Y +V + F ++    
Sbjct: 163 NNTLLHFYSVCRRIEDAHKVFDEFIERNDVVSWNILMGGCLFVSKYSLVFELFLKMCFGG 222

Query: 76  FDIGKATILTVLSAAGELNCIPGGK 2
                AT+L++LSAAG++     GK
Sbjct: 223 IKASVATMLSLLSAAGDIGNFVLGK 247


>ref|XP_004158148.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 556

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/85 (48%), Positives = 54/85 (63%)
 Frame = -2

Query: 256 NNTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSD 77
           NN L+HFY    +IK+AH+LFDE S   D+VSWNTLM GYL  SQ +VV+D FRQ+    
Sbjct: 162 NNILLHFYGACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRG 221

Query: 76  FDIGKATILTVLSAAGELNCIPGGK 2
                 T+L+V SA G++     G+
Sbjct: 222 LIANTGTLLSVASAVGDVGNTMDGR 246


>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/85 (48%), Positives = 54/85 (63%)
 Frame = -2

Query: 256 NNTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSD 77
           NN L+HFY    +IK+AH+LFDE S   D+VSWNTLM GYL  SQ +VV+D FRQ+    
Sbjct: 162 NNILLHFYGACEQIKDAHKLFDEISQRNDLVSWNTLMDGYLRASQPIVVLDTFRQMCRRG 221

Query: 76  FDIGKATILTVLSAAGELNCIPGGK 2
                 T+L+V SA G++     G+
Sbjct: 222 LIANTGTLLSVASAVGDVGNTMDGR 246


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 41/83 (49%), Positives = 50/83 (60%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+HFYCV GRI +AHQLFDE     D+VSWNTL+GGYL V    +V   F ++     
Sbjct: 166 NALLHFYCVCGRIGDAHQLFDEIPPKIDLVSWNTLLGGYLQVPHPTMVTCLFGEMCRKGL 225

Query: 73  DIGKATILTVLSAAGELNCIPGG 5
                TI +VL A G+L  I GG
Sbjct: 226 KFSTTTISSVLCAVGDLGNILGG 248


>ref|XP_006290820.1| hypothetical protein CARUB_v10016929mg [Capsella rubella]
           gi|482559527|gb|EOA23718.1| hypothetical protein
           CARUB_v10016929mg [Capsella rubella]
          Length = 575

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+HFYCV GRI +A ++FDE     D VS++TLM GYL VS+  + +D FR +  S+ 
Sbjct: 164 NALLHFYCVSGRITDARRVFDEMPQSVDAVSFSTLMNGYLQVSKQALALDLFRIMRISEV 223

Query: 73  DIGKATILTVLSAAGEL 23
            +  +T+L+ LSA G+L
Sbjct: 224 AVNVSTLLSFLSATGDL 240


>ref|XP_002522400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538285|gb|EEF39892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 476

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/84 (48%), Positives = 53/84 (63%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL+H Y V G I +A +LFDEFS   D+VSWN LMG YL VSQ  + I+ + Q+    F
Sbjct: 166 NTLLHLYSVCGLIGDAQKLFDEFSQLNDLVSWNALMGAYLHVSQPAMTIEVYGQMFRYGF 225

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
            +  AT L+VLSA  +L    GG+
Sbjct: 226 IMSVATSLSVLSAFADLGDPTGGE 249


>ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336467|gb|EFH66884.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 568

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/84 (42%), Positives = 54/84 (64%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+ FYCV GRI +A ++FDE     D VS++TLM GYL VS+  + +D FR +  S+ 
Sbjct: 160 NALLQFYCVCGRINDARKVFDEMPHSVDSVSFSTLMNGYLQVSKKALALDLFRIMRNSEV 219

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
            +  +T+L+ LSA G+L  + G +
Sbjct: 220 PVNVSTLLSFLSATGDLGNLSGAE 243


>ref|XP_006415976.1| hypothetical protein EUTSA_v10009468mg [Eutrema salsugineum]
           gi|557093747|gb|ESQ34329.1| hypothetical protein
           EUTSA_v10009468mg [Eutrema salsugineum]
          Length = 580

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/84 (41%), Positives = 53/84 (63%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+HFYCV GRI +A ++FDE     D VS++TLM GYL V +  + +D FR +  S+ 
Sbjct: 169 NALLHFYCVCGRISDARRVFDEMPQSVDAVSFSTLMNGYLQVFKPALALDLFRDMRKSEV 228

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
            +  + +L+ LSA G+L  + G +
Sbjct: 229 IVSDSALLSFLSATGDLGDLSGAE 252


>ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26900, mitochondrial; Flags: Precursor
           gi|4262179|gb|AAD14496.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192635|gb|AEE30756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 572

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/84 (40%), Positives = 54/84 (64%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+HFYCV G+I +A ++FDE     D V+++TLM GYL VS+  + +D FR +  S+ 
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223

Query: 73  DIGKATILTVLSAAGELNCIPGGK 2
            +  +T+L+ LSA  +L  + G +
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAE 247


>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/67 (50%), Positives = 43/67 (64%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           N L+HFYCV GRI +AHQLFDE     D+VSWNTL+GGYL V    +V   F ++   D 
Sbjct: 166 NALLHFYCVCGRIGDAHQLFDEIPPKIDLVSWNTLLGGYLQVPHPTMVTCLFGEMCRKDL 225

Query: 73  DIGKATI 53
           ++  A I
Sbjct: 226 NVATALI 232


>ref|XP_006493241.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 519

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%)
 Frame = -2

Query: 247 LMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDFDI 68
           L+ FYC +G +K A  LFD+ +  K+MV+W  ++ G++    Y   ID FR++  S  ++
Sbjct: 170 LITFYCNFGDVKSAQLLFDQMTE-KNMVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228

Query: 67  GKATILTVLSAAGELNCIPGGK 2
            + T+++VLSA   L     GK
Sbjct: 229 NELTLVSVLSACANLGASEMGK 250


>ref|XP_006436884.1| hypothetical protein CICLE_v10031246mg [Citrus clementina]
           gi|557539080|gb|ESR50124.1| hypothetical protein
           CICLE_v10031246mg [Citrus clementina]
          Length = 519

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/82 (35%), Positives = 48/82 (58%)
 Frame = -2

Query: 247 LMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDFDI 68
           L+ FYC +G +K A  LFD+ +  K+MV+W  ++ G++    Y   ID FR++  S  ++
Sbjct: 170 LITFYCNFGDVKSAQLLFDQMTE-KNMVTWTAMINGHVKQKNYREGIDLFRKMRDSGVEV 228

Query: 67  GKATILTVLSAAGELNCIPGGK 2
            + T+++VLSA   L     GK
Sbjct: 229 NELTLVSVLSACANLGASEMGK 250


>ref|XP_006439922.1| hypothetical protein CICLE_v10024603mg [Citrus clementina]
           gi|557542184|gb|ESR53162.1| hypothetical protein
           CICLE_v10024603mg [Citrus clementina]
          Length = 695

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/77 (33%), Positives = 43/77 (55%)
 Frame = -2

Query: 253 NTLMHFYCVYGRIKEAHQLFDEFSGGKDMVSWNTLMGGYLCVSQYLVVIDFFRQLHCSDF 74
           NTL+H Y + GRI  A ++FD  S  +D+ SWN++  GY+    +  ++D F ++     
Sbjct: 160 NTLIHLYAICGRIDIARKMFDRMSN-RDVFSWNSMFSGYVKTECWREIVDLFNEMRDLGV 218

Query: 73  DIGKATILTVLSAAGEL 23
              + T++ VL A G L
Sbjct: 219 KFDEVTLINVLMACGRL 235