BLASTX nr result

ID: Catharanthus23_contig00039232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00039232
         (405 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519399.1| Light-mediated development protein DET1, put...    58   1e-06
ref|XP_006596270.1| PREDICTED: light-mediated development protei...    57   2e-06
ref|XP_006590467.1| PREDICTED: light-mediated development protei...    57   3e-06
gb|ESW28996.1| hypothetical protein PHAVU_002G0354000g, partial ...    57   3e-06
ref|XP_004511490.1| PREDICTED: light-mediated development protei...    57   3e-06
ref|XP_003517544.1| PREDICTED: light-mediated development protei...    57   3e-06
ref|XP_003517543.1| PREDICTED: light-mediated development protei...    57   3e-06
ref|XP_006448512.1| hypothetical protein CICLE_v10015119mg [Citr...    55   9e-06
ref|XP_006448511.1| hypothetical protein CICLE_v10015119mg [Citr...    55   9e-06

>ref|XP_002519399.1| Light-mediated development protein DET1, putative [Ricinus
           communis] gi|223541466|gb|EEF43016.1| Light-mediated
           development protein DET1, putative [Ricinus communis]
          Length = 572

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/42 (69%), Positives = 30/42 (71%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LIMWKVQFLDRHHLLIKFGSVDGGV         F   YN+D
Sbjct: 357 LIMWKVQFLDRHHLLIKFGSVDGGVSRSADHHPSFFAVYNMD 398


>ref|XP_006596270.1| PREDICTED: light-mediated development protein DET1-like, partial
           [Glycine max]
          Length = 412

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 299 LIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPTFVVVYNMD 340


>ref|XP_006590467.1| PREDICTED: light-mediated development protein DET1-like isoform X4
           [Glycine max]
          Length = 536

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 320 LIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNMD 361


>gb|ESW28996.1| hypothetical protein PHAVU_002G0354000g, partial [Phaseolus
           vulgaris]
          Length = 426

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 321 LIIWKVQFLDRHHLLIKFGSVDGGVARNADHHPAFVAVYNMD 362


>ref|XP_004511490.1| PREDICTED: light-mediated development protein DET1-like isoform X4
           [Cicer arietinum]
          Length = 537

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 321 LIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNMD 362


>ref|XP_003517544.1| PREDICTED: light-mediated development protein DET1-like isoformX2
           [Glycine max]
          Length = 536

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 320 LIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNMD 361


>ref|XP_003517543.1| PREDICTED: light-mediated development protein DET1-like isoformX1
           [Glycine max]
          Length = 526

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 8/42 (19%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGV--------RFLFYYNLD 303
           LI+WKVQFLDRHHLLIKFGSVDGGV         F+  YN+D
Sbjct: 310 LIIWKVQFLDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNMD 351


>ref|XP_006448512.1| hypothetical protein CICLE_v10015119mg [Citrus clementina]
           gi|557551123|gb|ESR61752.1| hypothetical protein
           CICLE_v10015119mg [Citrus clementina]
          Length = 472

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGVRFLFYYNLDN 300
           LI+WKVQFLDRHHLLIKFGSVDGGV      N+DN
Sbjct: 256 LIIWKVQFLDRHHLLIKFGSVDGGVS----RNVDN 286


>ref|XP_006448511.1| hypothetical protein CICLE_v10015119mg [Citrus clementina]
           gi|557551122|gb|ESR61751.1| hypothetical protein
           CICLE_v10015119mg [Citrus clementina]
          Length = 458

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -2

Query: 404 LIMWKVQFLDRHHLLIKFGSVDGGVRFLFYYNLDN 300
           LI+WKVQFLDRHHLLIKFGSVDGGV      N+DN
Sbjct: 242 LIIWKVQFLDRHHLLIKFGSVDGGVS----RNVDN 272


Top