BLASTX nr result
ID: Catharanthus23_contig00038375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00038375
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ16089.1| hypothetical protein PRUPE_ppa001014mg [Prunus pe... 89 6e-16
ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea m... 88 1e-15
ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat... 88 1e-15
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
emb|CBI29414.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [S... 88 1e-15
ref|XP_002323645.2| pentatricopeptide repeat-containing family p... 87 2e-15
ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citr... 87 3e-15
ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
gb|AFG65809.1| hypothetical protein 2_9455_01, partial [Pinus ta... 87 3e-15
gb|AFG65806.1| hypothetical protein 2_9455_01, partial [Pinus ta... 87 3e-15
gb|AFG65804.1| hypothetical protein 2_9455_01, partial [Pinus ta... 87 3e-15
gb|AEW08424.1| hypothetical protein 2_9455_01, partial [Pinus ra... 87 3e-15
gb|EXB97712.1| hypothetical protein L484_020263 [Morus notabilis] 86 4e-15
ref|XP_006646055.1| PREDICTED: putative pentatricopeptide repeat... 86 4e-15
gb|ESW24404.1| hypothetical protein PHAVU_004G127800g [Phaseolus... 86 4e-15
gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus... 86 4e-15
ref|XP_006376468.1| hypothetical protein POPTR_0013s13270g [Popu... 86 4e-15
ref|XP_003619636.1| Pentatricopeptide repeat-containing protein ... 86 4e-15
>gb|EMJ16089.1| hypothetical protein PRUPE_ppa001014mg [Prunus persica]
Length = 934
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH K+ISK+VGR IVLRD SR+HHF+DG CSC DYW
Sbjct: 884 PIRIMKNLRVCGDCHSAFKYISKIVGRQIVLRDSSRFHHFADGKCSCGDYW 934
>ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Glycine max]
Length = 718
Score = 87.8 bits (216), Expect = 1e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI + KNLRVC DCH KHISK+VGR I++RD RYHHFS+G+CSC+DYW
Sbjct: 668 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 718
>tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 87.8 bits (216), Expect = 1e-15
Identities = 36/51 (70%), Positives = 41/51 (80%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNL VCGDCHEFSK ++K+ GR IV+RDGSR+HH DG CSC DYW
Sbjct: 587 PIRIVKNLSVCGDCHEFSKMVTKVFGREIVVRDGSRFHHMKDGKCSCHDYW 637
>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
+LITKNLRVCGDCHE +K ISK+V R IV+RD R+HHF DGVCSC DYW
Sbjct: 629 LLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 750
Score = 87.8 bits (216), Expect = 1e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI + KNLRVC DCH KHISK+VGR I++RD RYHHFS+G+CSC+DYW
Sbjct: 700 PIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
>emb|CBI29414.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 87.8 bits (216), Expect = 1e-15
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
+LITKNLRVCGDCHE +K ISK+V R IV+RD R+HHF DGVCSC DYW
Sbjct: 301 LLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 350
>ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein
SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 87.8 bits (216), Expect = 1e-15
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCHEF+K +SKL GR IV+RD +R+HHFS G CSC+D+W
Sbjct: 408 PIRIAKNLRVCGDCHEFTKLVSKLFGREIVVRDANRFHHFSGGSCSCEDFW 458
>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550321449|gb|EEF05406.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 682
Score = 87.0 bits (214), Expect = 2e-15
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
IL+ KNLRVCGDCHE KHIS++ GR I++RD +R+H F+DG+CSCKDYW
Sbjct: 633 ILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
>ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citrus clementina]
gi|568830346|ref|XP_006469462.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557550415|gb|ESR61044.1| hypothetical protein
CICLE_v10017893mg [Citrus clementina]
Length = 1057
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH K ISK+VGR IVLRD +R+HHF+DG CSC DYW
Sbjct: 1007 PIRIMKNLRVCGDCHSAFKFISKIVGREIVLRDSNRFHHFNDGKCSCGDYW 1057
>ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 690
Score = 86.7 bits (213), Expect = 3e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH+ +K ISK+ R IV+RD +RYHHF DG+CSCKDYW
Sbjct: 640 PIRIVKNLRVCGDCHQATKFISKVYDRVIVVRDRTRYHHFKDGICSCKDYW 690
>gb|AFG65809.1| hypothetical protein 2_9455_01, partial [Pinus taeda]
Length = 156
Score = 86.7 bits (213), Expect = 3e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
I +TKNLRVCGDCH +K ISK+VGR I++RD +R+HHF DG+CSC DYW
Sbjct: 107 ITVTKNLRVCGDCHRATKFISKVVGREIIMRDSNRFHHFKDGLCSCGDYW 156
>gb|AFG65806.1| hypothetical protein 2_9455_01, partial [Pinus taeda]
gi|383165806|gb|AFG65807.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
Length = 156
Score = 86.7 bits (213), Expect = 3e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
I +TKNLRVCGDCH +K ISK+VGR I++RD +R+HHF DG+CSC DYW
Sbjct: 107 ITVTKNLRVCGDCHRTTKFISKVVGREIIMRDSNRFHHFKDGLCSCGDYW 156
>gb|AFG65804.1| hypothetical protein 2_9455_01, partial [Pinus taeda]
gi|383165802|gb|AFG65805.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
gi|383165820|gb|AFG65814.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
Length = 156
Score = 86.7 bits (213), Expect = 3e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
I +TKNLRVCGDCH +K ISK+VGR I++RD +R+HHF DG+CSC DYW
Sbjct: 107 ITVTKNLRVCGDCHRATKFISKVVGREIIMRDANRFHHFKDGLCSCGDYW 156
>gb|AEW08424.1| hypothetical protein 2_9455_01, partial [Pinus radiata]
gi|383165794|gb|AFG65801.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
gi|383165798|gb|AFG65803.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
gi|383165808|gb|AFG65808.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
gi|383165812|gb|AFG65810.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
gi|383165814|gb|AFG65811.1| hypothetical protein
2_9455_01, partial [Pinus taeda]
Length = 156
Score = 86.7 bits (213), Expect = 3e-15
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 8 ILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
I +TKNLRVCGDCH +K ISK+VGR I++RD +R+HHF DG+CSC DYW
Sbjct: 107 ITVTKNLRVCGDCHRATKFISKVVGREIIMRDSNRFHHFKDGLCSCGDYW 156
>gb|EXB97712.1| hypothetical protein L484_020263 [Morus notabilis]
Length = 706
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI ITKNLRVC DCH +KHISK+V R +++RD +R+HHF DG CSCKDYW
Sbjct: 656 PIRITKNLRVCVDCHNVTKHISKIVRRELIVRDANRFHHFVDGNCSCKDYW 706
>ref|XP_006646055.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Oryza brachyantha]
Length = 1009
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +2
Query: 2 GPILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
GPI I KNLRVCGDCH K+IS++VGR I+LRD R+HHF DG CSC DYW
Sbjct: 958 GPIRIMKNLRVCGDCHTAFKYISQIVGRKIILRDSIRFHHFEDGECSCGDYW 1009
>gb|ESW24404.1| hypothetical protein PHAVU_004G127800g [Phaseolus vulgaris]
Length = 623
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH+ +K ISK+ R I++RD +RYHHF DG+CSCKDYW
Sbjct: 573 PIRIVKNLRVCGDCHQATKFISKVYDRVIIVRDRTRYHHFKDGICSCKDYW 623
>gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus vulgaris]
Length = 1030
Score = 86.3 bits (212), Expect = 4e-15
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH K+ISK+V R I+LRD +R+HHF DG+CSC DYW
Sbjct: 980 PIRIMKNLRVCGDCHTAFKYISKIVNRKIILRDSNRFHHFDDGICSCGDYW 1030
>ref|XP_006376468.1| hypothetical protein POPTR_0013s13270g [Populus trichocarpa]
gi|550325744|gb|ERP54265.1| hypothetical protein
POPTR_0013s13270g [Populus trichocarpa]
Length = 934
Score = 86.3 bits (212), Expect = 4e-15
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCH K+ISK+V R+IVLRD +R+HHF DG CSC+DYW
Sbjct: 884 PIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 934
>ref|XP_003619636.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494651|gb|AES75854.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 403
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = +2
Query: 5 PILITKNLRVCGDCHEFSKHISKLVGRNIVLRDGSRYHHFSDGVCSCKDYW 157
PI I KNLRVCGDCHE K ISK+ R I++RD RYHHF DGVCSCKDYW
Sbjct: 353 PICIVKNLRVCGDCHEAIKFISKVYDRVIIVRDRMRYHHFKDGVCSCKDYW 403