BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00037889
         (349 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   108   6e-22
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s...   106   4e-21
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   103   2e-20
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   103   2e-20
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   102   5e-20
gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlise...   100   2e-19
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe...    99   8e-19
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...    97   2e-18
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...    94   2e-17
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put...    94   2e-17
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus...    93   4e-17
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...    93   4e-17
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s...    92   7e-17
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...    91   1e-16
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...    90   3e-16
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...    89   5e-16
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...    89   5e-16
ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III s...    89   5e-16
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                           89   6e-16

>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/67 (77%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHK-IGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GEYHSIP+G+ CYRIA   GV  G K IG MASIPCG CPRI  CTPDGIISPKTCVY+T
Sbjct: 173 GEYHSIPIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFT 230

Query: 170 KWLDIEF 150
           KWLDIEF
Sbjct: 231 KWLDIEF 237


>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Solanum tuberosum]
          Length = 237

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/67 (76%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHK-IGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GEYHSIP+G+ CYRIA   G   G K IG MASIPCG CPRI  CTPDGIISPKTCVYYT
Sbjct: 173 GEYHSIPIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYT 230

Query: 170 KWLDIEF 150
           KWL+IEF
Sbjct: 231 KWLNIEF 237


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHK-IGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GE+ SIP+GA CYR  N  G+  G   IGAMASIPCG+CPRI QCTPDGIISPKTC YYT
Sbjct: 236 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 295

Query: 170 KWLD 159
           KWLD
Sbjct: 296 KWLD 299


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHK-IGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GE+ SIP+GA CYR  N  G+  G   IGAMASIPCG+CPRI QCTPDGIISPKTC YYT
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 234

Query: 170 KWLD 159
           KWLD
Sbjct: 235 KWLD 238


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  103 bits (257), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHK-IGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GE+ SIP+GA CYR  N  G+  G   IGAMASIPCG+CPRI QCTPDGIISPKTC YYT
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 234

Query: 170 KWLD 159
           KWLD
Sbjct: 235 KWLD 238


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  102 bits (254), Expect = 5e-20
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGH-KIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GE+ SIP+GA CYR  N  G+  G  KIGAMASIPCG+CPRI QCTPDGIISPK+C YY 
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYA 234

Query: 170 KWLD 159
           KWLD
Sbjct: 235 KWLD 238


>gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlisea aurea]
          Length = 179

 Score =  100 bits (249), Expect = 2e-19
 Identities = 42/66 (63%), Positives = 49/66 (74%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           G+Y  IP G  CYRIA   G  +G +IG  ASIPCG CPRI  CTPDG+ISP TCVYYTK
Sbjct: 114 GDYELIPAGENCYRIATGDGAARGPRIGGFASIPCGACPRISSCTPDGLISPSTCVYYTK 173

Query: 167 WLDIEF 150
           WL+++F
Sbjct: 174 WLNLDF 179


>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ S P+G  CY+  +  G  +  K+GAMASIPCG+CPRI QCTPDGIISP+TCVY+TK
Sbjct: 173 GEFGSFPVGKVCYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTK 232

Query: 167 WLD 159
           WLD
Sbjct: 233 WLD 235


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 42/63 (66%), Positives = 48/63 (76%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ SIP G  CY+  +  G+    K GA+ASIPCG+CPRI QCTPDGIISPKTCVYY K
Sbjct: 176 GEFASIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQK 235

Query: 167 WLD 159
           WLD
Sbjct: 236 WLD 238


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 41/63 (65%), Positives = 46/63 (73%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ SIP G  CYR  +   +    K GA+ASIPCG+CPRI  CTPDGIISPKTCVYY K
Sbjct: 228 GEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQK 287

Query: 167 WLD 159
           WLD
Sbjct: 288 WLD 290


>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/63 (63%), Positives = 46/63 (73%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ SIP+G  CY+     G     K+G MASIPCG+CP+I  CTPDGIISPKTCVYY K
Sbjct: 174 GEFASIPVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKK 233

Query: 167 WLD 159
           WLD
Sbjct: 234 WLD 236


>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           G++ S+P+G  CYR  +  G     K GAMASIPCG+CPRI  CTPDGIISP+TCVYY K
Sbjct: 176 GDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQK 235

Query: 167 WLD 159
           WLD
Sbjct: 236 WLD 238


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           G++ S+P+G  CYR  +  G     K GAMASIPCG+CPRI  CTPDGIISP+TCVYY K
Sbjct: 176 GDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQK 235

Query: 167 WLD 159
           WLD
Sbjct: 236 WLD 238


>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Cucumis sativus] gi|449506569|ref|XP_004162785.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC6-like [Cucumis sativus]
          Length = 243

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGH-KIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYT 171
           GE+  IP+G  CY+     G  KG  K GAMASIPCG+CPRI  CTP+GIISP TCVYYT
Sbjct: 179 GEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYT 238

Query: 170 KWLD 159
           KWLD
Sbjct: 239 KWLD 242


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 39/62 (62%), Positives = 46/62 (74%)
 Frame = -3

Query: 344 EYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTKW 165
           E+  IP+G  CY+           +IGAMASIPCG+CPRI QCTPDGIISP+TCVYY+KW
Sbjct: 174 EFSFIPIGKVCYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKW 233

Query: 164 LD 159
           LD
Sbjct: 234 LD 235


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ SIP+G  CY+  +  G     KIGAM+SIPCG+CPRI  CTPDGIISPKTC YY++
Sbjct: 176 GEFDSIPVGKVCYKSTS-KGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQ 234

Query: 167 WLD 159
           WLD
Sbjct: 235 WLD 237


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 37/63 (58%), Positives = 47/63 (74%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ +IP+G  CY+  +  G     K G+ AS+PCG+CP+I  CTPDG+ISPKTCVYYTK
Sbjct: 171 GEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTK 230

Query: 167 WLD 159
           WLD
Sbjct: 231 WLD 233


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 37/63 (58%), Positives = 47/63 (74%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ +IP+G  CY+  +  G     K G+ AS+PCG+CP+I  CTPDG+ISPKTCVYYTK
Sbjct: 189 GEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTK 248

Query: 167 WLD 159
           WLD
Sbjct: 249 WLD 251


>ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 229

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 38/63 (60%), Positives = 46/63 (73%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           G++ S+P+G  CYR+     V K   +GAMASIPCG+CPRI  CTPDG+ISP TC YY K
Sbjct: 171 GDFESVPVGEVCYRL-----VKKAAGVGAMASIPCGVCPRINSCTPDGVISPTTCQYYQK 225

Query: 167 WLD 159
           WLD
Sbjct: 226 WLD 228


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = -3

Query: 347 GEYHSIPLGAQCYRIANVAGVNKGHKIGAMASIPCGMCPRIRQCTPDGIISPKTCVYYTK 168
           GE+ SIP+G  CY+     G +   KIGAMASIPCG+CPRI+ CTP+GIISP+TCVYY K
Sbjct: 173 GEFASIPVGKVCYKSIG-KGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGK 231

Query: 167 WLD 159
           WL+
Sbjct: 232 WLE 234