BLASTX nr result

ID: Catharanthus23_contig00037772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00037772
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY30928.1| Homeodomain-like superfamily protein [Theobroma c...    49   3e-07
ref|XP_002529346.1| conserved hypothetical protein [Ricinus comm...    50   8e-07
gb|EXB76260.1| Two-component response regulator [Morus notabilis]      49   2e-06

>gb|EOY30928.1| Homeodomain-like superfamily protein [Theobroma cacao]
          Length = 467

 Score = 48.9 bits (115), Expect(2) = 3e-07
 Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = -2

Query: 170 DWSGSIGNWKLESSSWKADA--NGGENERQIKGLVA-REAGEESHGSEITL 27
           D S SI + K ESSSWK ++  NGG  ER  KGL A RE GEES+GSEITL
Sbjct: 417 DRSESIEDGKSESSSWKGESGDNGGAGER--KGLAALREEGEESNGSEITL 465



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -1

Query: 276 PPPVAHHHQFYNQIHVYQS 220
           PPP  HHH  ++Q+H+Y++
Sbjct: 382 PPPQLHHHAIHHQLHMYKA 400


>ref|XP_002529346.1| conserved hypothetical protein [Ricinus communis]
           gi|223531166|gb|EEF33013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score = 49.7 bits (117), Expect(2) = 8e-07
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = -2

Query: 251 SSTTKSMYINPFADAKLVGI*CQRRFRDWSGSIGNWKLESSSWKADANGGENERQIKGLV 72
           +  T   + +P +D +  G        D S SI + K ESSSWKA++  GEN  + KGL 
Sbjct: 407 NKATSQAHSSPESDIRGTG--------DRSESIEDGKSESSSWKAES--GENGGERKGLA 456

Query: 71  A-REAGEESHGSEITL 27
           A RE GEES+GSEITL
Sbjct: 457 AFREDGEESNGSEITL 472



 Score = 28.9 bits (63), Expect(2) = 8e-07
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = -1

Query: 282 PIPPP--VAHHHQFYNQIHVY 226
           P+PPP    HHH  ++Q+H+Y
Sbjct: 386 PLPPPHHQLHHHTLHHQLHMY 406


>gb|EXB76260.1| Two-component response regulator [Morus notabilis]
          Length = 495

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -2

Query: 242 TKSMYINPFADAKLVGI*CQRRFRDWSGSIGNWKLESSSWKADANGGENERQIKGLVA-R 66
           T  ++ +P +D +  G        D S SI + K ESSSWK ++  GEN  + KGL A R
Sbjct: 431 TSQIHSSPESDVRGAG--------DRSESIEDGKSESSSWKGES--GENGGERKGLAALR 480

Query: 65  EAGEESHGSEITL 27
           E GEES+GSEITL
Sbjct: 481 EDGEESNGSEITL 493



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 5/24 (20%)
 Frame = -1

Query: 276 PPPVAHHHQ-----FYNQIHVYQS 220
           PPP+ HHHQ      ++Q+H+Y++
Sbjct: 407 PPPMPHHHQLHHHALHHQLHMYKA 430


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