BLASTX nr result
ID: Catharanthus23_contig00036583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00036583
(378 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349487.1| PREDICTED: rop guanine nucleotide exchange f... 72 6e-11
ref|XP_004249581.1| PREDICTED: rop guanine nucleotide exchange f... 72 8e-11
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f... 69 6e-10
emb|CBI30469.3| unnamed protein product [Vitis vinifera] 69 6e-10
emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera] 69 6e-10
gb|EMJ06167.1| hypothetical protein PRUPE_ppa002319mg [Prunus pe... 69 8e-10
ref|XP_002309095.2| hypothetical protein POPTR_0006s09370g [Popu... 67 2e-09
ref|XP_002323531.2| hypothetical protein POPTR_0016s10130g [Popu... 67 3e-09
gb|EXB36686.1| Rop guanine nucleotide exchange factor 1 [Morus n... 66 5e-09
gb|EOY07372.1| RHO guanyl-nucleotide exchange factor 7 [Theobrom... 66 5e-09
ref|XP_002315189.2| hypothetical protein POPTR_0010s20330g [Popu... 58 1e-06
ref|XP_004302692.1| PREDICTED: rop guanine nucleotide exchange f... 57 2e-06
ref|XP_002312130.2| hypothetical protein POPTR_0008s06230g [Popu... 57 3e-06
>ref|XP_006349487.1| PREDICTED: rop guanine nucleotide exchange factor 7-like [Solanum
tuberosum]
Length = 692
Score = 72.4 bits (176), Expect = 6e-11
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVE----RPSAN 210
L +HSDQ V IS+V IA + +V +GTP TAFTTPS SP + + S
Sbjct: 562 LNKHSDQFVPISKVGIIAHKSMGTPLSVPVNGTPYKTAFTTPSFSPSQHISPTKGERSKM 621
Query: 209 LERNKLNHRGLGVRKVLTDYLSIDT 135
E +KL+ RG GV+KVLTDYLSID+
Sbjct: 622 FEGSKLSTRGFGVKKVLTDYLSIDS 646
>ref|XP_004249581.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Solanum
lycopersicum]
Length = 679
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERP----SAN 210
L +HSDQ V IS+V IA + +V +GTP TAFTTPS SP + + S
Sbjct: 549 LNKHSDQFVPISKVGIIAHKSMGTPLSVPVNGTPYKTAFTTPSFSPSQHISPAKGDRSKM 608
Query: 209 LERNKLNHRGLGVRKVLTDYLSIDT 135
E +KL+ RG GV+KVLTDYLSID+
Sbjct: 609 FEGSKLSTRGFGVKKVLTDYLSIDS 633
>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
vinifera]
Length = 701
Score = 68.9 bits (167), Expect = 6e-10
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERPSANLERN 198
LT+HSDQ +SIS+V +A + +V TP TAFTTPS SP + V AN +R+
Sbjct: 567 LTKHSDQLLSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPSFSPGQLVS--PANGDRS 624
Query: 197 ------KLNHRGLGVRKVLTDYLSIDT 135
L HRG GV+KVLTDYLSIDT
Sbjct: 625 PFINDCNLLHRGFGVKKVLTDYLSIDT 651
>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
Length = 1231
Score = 68.9 bits (167), Expect = 6e-10
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERPSANLERN 198
LT+HSDQ +SIS+V +A + +V TP TAFTTPS SP + V AN +R+
Sbjct: 1097 LTKHSDQLLSISKVGVMAHKGVSIPYSVPVPNTPYKTAFTTPSFSPGQLVS--PANGDRS 1154
Query: 197 ------KLNHRGLGVRKVLTDYLSIDT 135
L HRG GV+KVLTDYLSIDT
Sbjct: 1155 PFINDCNLLHRGFGVKKVLTDYLSIDT 1181
>emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]
Length = 640
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/85 (48%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERPSAN---- 210
LT+HSDQ +SIS+V +A + +V TP TAFTTPS SP + V + +
Sbjct: 506 LTKHSDQLLSISKVGVVAHKGVSIPYSVPVPNTPYKTAFTTPSFSPGQLVSPANGDSSPF 565
Query: 209 LERNKLNHRGLGVRKVLTDYLSIDT 135
+ L HRG GV+KVLTDYLSIDT
Sbjct: 566 INDCNLLHRGFGVKKVLTDYLSIDT 590
>gb|EMJ06167.1| hypothetical protein PRUPE_ppa002319mg [Prunus persica]
Length = 687
Score = 68.6 bits (166), Expect = 8e-10
Identities = 43/84 (51%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVE----RPSAN 210
LTRHSDQ SIS+V+ I+ + +V S TP TAFTTPS SP + V S
Sbjct: 553 LTRHSDQFSSISKVSIISHKSTPNPYSVPISSTPYKTAFTTPSFSPGQLVSPLRGDRSPF 612
Query: 209 LERNKLNHRGLGVRKVLTDYLSID 138
+ K+ RGLGV+KVLTDYLSID
Sbjct: 613 ITSGKIPQRGLGVKKVLTDYLSID 636
>ref|XP_002309095.2| hypothetical protein POPTR_0006s09370g [Populus trichocarpa]
gi|550335855|gb|EEE92618.2| hypothetical protein
POPTR_0006s09370g [Populus trichocarpa]
Length = 610
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERP-----SA 213
LT+HSD SIS+V+ IA +V S TP TAF TPS SP +Q P S
Sbjct: 478 LTKHSDHFSSISKVSVIAHKSVTIPYSVPVSNTPYKTAFNTPSFSPGQQRISPAKGDRSP 537
Query: 212 NLERNKLNHRGLGVRKVLTDYLSIDT 135
+ K+ RGLGV+KVLT+YLSIDT
Sbjct: 538 FMTSGKIPQRGLGVKKVLTEYLSIDT 563
>ref|XP_002323531.2| hypothetical protein POPTR_0016s10130g [Populus trichocarpa]
gi|550321195|gb|EEF05292.2| hypothetical protein
POPTR_0016s10130g [Populus trichocarpa]
Length = 721
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERPSAN---- 210
LT+HSD SIS+V+ IA +V S +P TAFTTPS SP +++ +
Sbjct: 590 LTKHSDHFSSISKVSVIAHKSVTIPYSVPASNSPYKTAFTTPSFSPGQRISPVKGDRSPF 649
Query: 209 LERNKLNHRGLGVRKVLTDYLSIDT 135
+ K+ GLGV+KVLTDYLSIDT
Sbjct: 650 MTSGKIPQHGLGVKKVLTDYLSIDT 674
>gb|EXB36686.1| Rop guanine nucleotide exchange factor 1 [Morus notabilis]
Length = 691
Score = 65.9 bits (159), Expect = 5e-09
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVERPSAN---- 210
LT+HSDQ SIS+V +A +V TP TAFTTPS SP + V +
Sbjct: 555 LTKHSDQFCSISKVGLLAQNGPPMSYSVPVPCTPYKTAFTTPSFSPARLVSPARGDRSPF 614
Query: 209 LERNKLNHRGLGVRKVLTDYLSIDT 135
+ K+ RGLGV+KVLTDYLSI+T
Sbjct: 615 ITSGKIPQRGLGVKKVLTDYLSIET 639
>gb|EOY07372.1| RHO guanyl-nucleotide exchange factor 7 [Theobroma cacao]
Length = 757
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQVE----RPSAN 210
LT+HSDQ S++ V I + +V S TP TAFTTP+ SP + V S
Sbjct: 563 LTKHSDQFSSLTRVGVIGQKSLSIPYSVPFSSTPYRTAFTTPNFSPAQLVSPAKGERSPY 622
Query: 209 LERNKLNHRGLGVRKVLTDYLSID 138
L +K RG+GV+KVLTDYLSID
Sbjct: 623 LTSSKFQQRGIGVKKVLTDYLSID 646
>ref|XP_002315189.2| hypothetical protein POPTR_0010s20330g [Populus trichocarpa]
gi|550330218|gb|EEF01360.2| hypothetical protein
POPTR_0010s20330g [Populus trichocarpa]
Length = 603
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKNVSKSGTPNNTAFTTPSTSPVKQV-----ERP-- 219
LT+HSD+ S+ V+ I+ + +V SGT T F+TPS SP+ + ER
Sbjct: 462 LTKHSDKLSSVPTVSVISHKKVSIPYSVPVSGTSYKTTFSTPSFSPMPLISPVRGERTPF 521
Query: 218 -----SANLERNKLNHRGLGVRKVLTDYLSIDT 135
++N + NK +HRG GV++VLT+YL +D+
Sbjct: 522 LHNITTSNNDNNKPHHRGFGVKRVLTNYLGVDS 554
>ref|XP_004302692.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Fragaria
vesca subsp. vesca]
Length = 707
Score = 57.0 bits (136), Expect = 2e-06
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Frame = -2
Query: 377 LTRHSDQSVSISE-----VNAIAIADHNSV----KNVSKSGTPNNTAFTTPSTSPVKQ-- 231
LTRHSDQ S+ ++ +++ H + +V S TP TA+ TP+ SP ++
Sbjct: 559 LTRHSDQFPSMHSDQFPSISKVSVISHKATPIPYSSVPISSTPYKTAYATPNYSPAQRAS 618
Query: 230 ---VERPSANLERNKLNHRGLGVRKVLTDYLSIDT 135
VE+ RGLGV+KVLTDYLSIDT
Sbjct: 619 PLRVEKSPFMTNAKISPQRGLGVKKVLTDYLSIDT 653
>ref|XP_002312130.2| hypothetical protein POPTR_0008s06230g [Populus trichocarpa]
gi|550332536|gb|EEE89497.2| hypothetical protein
POPTR_0008s06230g [Populus trichocarpa]
Length = 629
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Frame = -2
Query: 377 LTRHSDQSVSISEVNAIAIADHNSVKN---VSKSGTPNNTAFTTPSTSPVKQV------- 228
LT+ SD ++S V+ +A+ H V N V SGTP T F+TPS SPV +
Sbjct: 464 LTKRSD---NLSSVSTVAVISHRKVSNPFSVPVSGTPYKTTFSTPSFSPVPLISPARGER 520
Query: 227 -----ERPSANLERNKLNHRGLGVRKVLTDYLSIDT 135
S+ NK RG GV++ LT+YL++D+
Sbjct: 521 TPFLHSTTSSKSNNNKPPRRGFGVKRALTNYLAVDS 556