BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00036422
         (281 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23
ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]   109   4e-22
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...   105   8e-21
gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus pe...   102   4e-20
gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protei...   100   3e-19
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ...    89   6e-16
gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis]      89   8e-16
ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, part...    88   1e-15
ref|XP_004490048.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
gb|EMT14777.1| hypothetical protein F775_15728 [Aegilops tauschii]     77   3e-12
ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
gb|ESW31745.1| hypothetical protein PHAVU_002G264000g [Phaseolus...    74   3e-11
ref|XP_002318942.2| pentatricopeptide repeat-containing family p...    72   8e-11
ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ...    72   1e-10
ref|XP_002516017.1| pentatricopeptide repeat-containing protein,...    71   1e-10

>ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Citrus sinensis]
          Length = 618

 Score =  114 bits (286), Expect = 1e-23
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = +3

Query: 18  RIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAG 197
           +I KL+T+GFY+EA++LYS+ HS+S  P+KF FP L K C KLK+  Q Q++HA LIK G
Sbjct: 6   QIPKLITNGFYKEALSLYSQQHSASLPPHKFTFPPLFKVCAKLKSSIQGQILHAHLIKTG 65

Query: 198 FQSKIHTATALTDMYMKFNLTDSATKVF 281
           F S+IH ATALTDMYMK NL   A KVF
Sbjct: 66  FSSEIHAATALTDMYMKLNLVSDALKVF 93


>ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Solanum lycopersicum]
          Length = 615

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/91 (60%), Positives = 67/91 (73%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M  +IAKLV +G Y+EAINLYS+LH SS  P KF FP L KAC KLK   Q Q++H+ LI
Sbjct: 1   MKIQIAKLVANGLYKEAINLYSQLHYSSLSPTKFTFPCLFKACAKLKFIPQGQILHSHLI 60

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF + ++ AT+LTDMYMKF L +SA KVF
Sbjct: 61  KHGFNTDVYAATSLTDMYMKFGLVESALKVF 91


>ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Solanum tuberosum]
          Length = 615

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/91 (59%), Positives = 66/91 (72%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M  +I KLV +G Y+EAINLYS+LH SS  P KF FP L KAC KL+   Q Q++H+ LI
Sbjct: 1   MKNQITKLVANGLYKEAINLYSQLHYSSLSPTKFTFPCLFKACAKLRTIPQGQVLHSHLI 60

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF + ++ AT+LTDMYMKF L DSA KVF
Sbjct: 61  KHGFNTDVYAATSLTDMYMKFALVDSALKVF 91


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/92 (59%), Positives = 68/92 (73%)
 Frame = +3

Query: 6   SMTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQL 185
           SM + IAKLV++GFY EA++LYS+LHSSS + +KF FPFLLKA  KL +  Q Q++H QL
Sbjct: 60  SMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQL 119

Query: 186 IKAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           IK GF   I+ ATAL DMYMK +L   A KVF
Sbjct: 120 IKTGFHLDIYAATALADMYMKLHLLSYALKVF 151


>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/91 (59%), Positives = 67/91 (73%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M + IAKLV++GFY EA++LYS+LHSSS + +KF FPFLLKA  KL +  Q Q++H QLI
Sbjct: 1   MKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLI 60

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF   I+ ATAL DMYMK +L   A KVF
Sbjct: 61  KTGFHLDIYAATALADMYMKLHLLSYALKVF 91


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/91 (58%), Positives = 65/91 (71%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M  +I KLV +GFY+EAI+L+S LHS+S  P++F FP LLKAC KL +  QAQ+IH  LI
Sbjct: 104 MKHQIVKLVANGFYKEAISLHSRLHSASIHPHQFTFPALLKACAKLNSPLQAQIIHTHLI 163

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF   I+TATALT MYM+  L   A KVF
Sbjct: 164 KTGFNLNIYTATALTSMYMQLALLPDAMKVF 194


>gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus persica]
          Length = 619

 Score =  102 bits (255), Expect = 4e-20
 Identities = 48/91 (52%), Positives = 67/91 (73%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M + IA+LV DG Y +A+ LY++LHS+S  P+KF FP LLKAC KL++   AQ++H  L+
Sbjct: 1   MKREIARLVADGLYRDALCLYAQLHSASLRPHKFTFPPLLKACGKLQSAPHAQILHTHLM 60

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF + +++ATALTD+YMK +L   A KVF
Sbjct: 61  KTGFSADVYSATALTDVYMKLHLIGDAVKVF 91


>gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 618

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 49/91 (53%), Positives = 62/91 (68%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLI 188
           M Q+I KLVT G Y+EA++L+S+ H  S +PNKF FP L KAC KL +  Q Q++H  LI
Sbjct: 1   MKQQILKLVTKGLYKEALHLHSQHHKDSLLPNKFTFPPLFKACAKLNSPIQGQILHTHLI 60

Query: 189 KAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           K GF   I+ ATALTD YMK +  + A KVF
Sbjct: 61  KTGFSHDIYAATALTDTYMKLHHFEYALKVF 91


>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514939|gb|AES96562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/74 (58%), Positives = 51/74 (68%)
 Frame = +3

Query: 21  IAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGF 200
           + KLV +G Y+EA+NLYS LHSSS  PN F FP LLKAC  L + SQ Q++HA L K GF
Sbjct: 7   VTKLVANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGF 66

Query: 201 QSKIHTATALTDMY 242
            S  HT+TAL   Y
Sbjct: 67  HSHPHTSTALIASY 80


>gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis]
          Length = 619

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = +3

Query: 9   MTQRIAKLVTDGFYEEAINLYSELHSSSFI-PNKFNFPFLLKACVKLKAFSQAQLIHAQL 185
           M + + KLV DG Y++A+ LYS+  SSS   P++F FP LLKAC KL+A S  Q++H  L
Sbjct: 1   MKRNVGKLVEDGLYKKALFLYSKSSSSSSRRPHRFTFPPLLKACAKLQAASHGQMLHTHL 60

Query: 186 IKAGFQSKIHTATALTDMYMKFNLTDSATKVF 281
           +K GF S  + ATALT MYM   L   A KVF
Sbjct: 61  LKTGFSSDSYAATALTGMYMNIRLFRDALKVF 92


>ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, partial [Citrus clementina]
           gi|557540827|gb|ESR51871.1| hypothetical protein
           CICLE_v10033863mg, partial [Citrus clementina]
          Length = 592

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/67 (62%), Positives = 48/67 (71%)
 Frame = +3

Query: 81  HSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGFQSKIHTATALTDMYMKFNLT 260
           HS+S  P+KF FP L K C KLK+  Q Q++HA LIK GF S+IH ATALTDMYMK NL 
Sbjct: 1   HSASLPPHKFTFPPLFKVCAKLKSSIQGQILHAHLIKTGFSSEIHAATALTDMYMKLNLV 60

Query: 261 DSATKVF 281
             A KVF
Sbjct: 61  SDALKVF 67


>ref|XP_004490048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Cicer arietinum]
          Length = 863

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
 Frame = +3

Query: 3   SSMTQRIAKLVTDGFYEEAINLYSELH-SSSFIPNKFNFPFLLKACVKLKAFS--QAQLI 173
           S +   + KLV DG Y+EA++ YS LH SSS  P+ F FP LLKAC  L   S  Q+Q++
Sbjct: 5   SDIITTLRKLVQDGLYKEALHFYSHLHHSSSHTPHSFTFPILLKACSNLSPSSPSQSQIL 64

Query: 174 HAQLIKAGFQSKIHTATALTDMY 242
           HA L K GF S  HT TALT  Y
Sbjct: 65  HAHLFKTGFYSHPHTTTALTAAY 87


>gb|EMT14777.1| hypothetical protein F775_15728 [Aegilops tauschii]
          Length = 627

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/89 (42%), Positives = 54/89 (60%)
 Frame = +3

Query: 15  QRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKA 194
           +R+ KLV++G+Y+EA+  YS  H+S+  P+ F FP LLK+C  L+       +H  L K+
Sbjct: 14  KRLCKLVSNGYYQEALLAYSRAHASNLRPDAFTFPCLLKSCAALQDAPAVLQVHGHLAKS 73

Query: 195 GFQSKIHTATALTDMYMKFNLTDSATKVF 281
           GF S  +TATALT  Y +      A KVF
Sbjct: 74  GFSSCPYTATALTSAYARLLRLGEACKVF 102


>ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 637

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
 Frame = +3

Query: 21  IAKLVTDGFYEEAINLYSELHS-SSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAG 197
           +AKLV+DGFY EA++L+S LHS SS   + F FP L KAC  L++ S  Q +HA L+K G
Sbjct: 18  LAKLVSDGFYREALSLFSHLHSCSSHTLHSFTFPTLFKACTNLRSPSHTQTLHAHLLKTG 77

Query: 198 FQSKIHTATALTDMY 242
           F S  + ++ALT  Y
Sbjct: 78  FHSDPYASSALTAAY 92


>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449522468|ref|XP_004168248.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/81 (41%), Positives = 50/81 (61%)
 Frame = +3

Query: 39  DGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGFQSKIHT 218
           +G YE AI+LY ++     +P+KF FPF+LKAC  L A  + + IH  +I++G +S +  
Sbjct: 80  NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139

Query: 219 ATALTDMYMKFNLTDSATKVF 281
             AL DMY K    +SA +VF
Sbjct: 140 GAALIDMYAKCGCVESARQVF 160


>gb|ESW31745.1| hypothetical protein PHAVU_002G264000g [Phaseolus vulgaris]
          Length = 670

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/87 (40%), Positives = 51/87 (58%)
 Frame = +3

Query: 21  IAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGF 200
           I  LV  G +  A+ L+  +  ++  PN   FPFLLKAC KL     +++IHA ++K+ F
Sbjct: 26  IRHLVNQGHHHNALLLFRHMKRTALTPNNSTFPFLLKACAKLSHLLNSKIIHAHVLKSRF 85

Query: 201 QSKIHTATALTDMYMKFNLTDSATKVF 281
           QS I+  TA+ DMY+K    + A  VF
Sbjct: 86  QSNIYVQTAMVDMYVKCGQLEDAHNVF 112


>ref|XP_002318942.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550324648|gb|EEE94865.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 707

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = +3

Query: 42  GFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGFQSKIHTA 221
           G   +A+ L+S++H + F+P++F    +LKAC  + A  + +  H  L+K+G++++I+TA
Sbjct: 293 GDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTA 352

Query: 222 TALTDMYMKFNLTDSATKVF 281
           TAL DMY KF  T  A K F
Sbjct: 353 TALVDMYAKFGFTGDARKGF 372



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/90 (33%), Positives = 46/90 (51%)
 Frame = +3

Query: 12  TQRIAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIK 191
           T  IA  V +G  EEA+++Y  +     +PN+     +LKAC  L A  Q + IHA+ IK
Sbjct: 384 TSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIK 443

Query: 192 AGFQSKIHTATALTDMYMKFNLTDSATKVF 281
            G   ++   +AL+ MY K    +    +F
Sbjct: 444 YGLGPELSIRSALSTMYAKCGSLEEGVLIF 473


>ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/84 (41%), Positives = 48/84 (57%)
 Frame = +3

Query: 30  LVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGFQSK 209
           LV  G  + A+ L+ ++  S   PN   FPF+LKAC KL     +Q+IHA ++K+ FQS 
Sbjct: 28  LVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSN 87

Query: 210 IHTATALTDMYMKFNLTDSATKVF 281
           I   TA  DMY+K    + A  VF
Sbjct: 88  IFVQTATVDMYVKCGRLEDAHNVF 111


>ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330997|gb|EFH61416.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 655

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/87 (40%), Positives = 53/87 (60%)
 Frame = +3

Query: 21  IAKLVTDGFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGF 200
           I   V++GF E+A++LY ++ +S   P KF +PF+LKAC  L+A    +LIH+ +  + F
Sbjct: 75  IRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNF 134

Query: 201 QSKIHTATALTDMYMKFNLTDSATKVF 281
            + ++  TAL D Y K    D A KVF
Sbjct: 135 AADMYVCTALVDFYAKCGELDMAIKVF 161


>ref|XP_002516017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544922|gb|EEF46437.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = +3

Query: 42  GFYEEAINLYSELHSSSFIPNKFNFPFLLKACVKLKAFSQAQLIHAQLIKAGFQSKIHTA 221
           G YE +I LY ++     +P+ F FPF+LKAC  L A    +LIH Q++++G++  +   
Sbjct: 167 GPYEASIQLYYKIFDYGLVPDNFTFPFVLKACSALSAIEDGRLIHEQVMRSGWERDVFVG 226

Query: 222 TALTDMYMKFNLTDSATKVF 281
            AL DMY K    D+A +VF
Sbjct: 227 AALIDMYSKCGCVDNAREVF 246