BLASTX nr result

ID: Catharanthus23_contig00036229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00036229
         (432 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]                 71   2e-10
gb|AAS79612.1| putative tnp2 transposase [Ipomoea trifida]             71   2e-10

>dbj|BAF36287.1| hypothetical protein [Ipomoea trifida]
          Length = 853

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/136 (33%), Positives = 66/136 (48%)
 Frame = -3

Query: 430 AKCKNLNYLKEDDMKLHLYKLGFLPNYHNWTVHGEPLIGY*PIVREGSSTRNVESNTYRE 251
           +KCKN  +L  D++++HLYK GF P Y  WT HGEP+    P V E       ESN Y  
Sbjct: 111 SKCKNRVHLSADEVRVHLYKKGFEPYYWVWTCHGEPI----PTVNEQFQETRNESNQYET 166

Query: 250 GIF*CGWSEF*TRCGVLQL**GT*S*SSRVYDILKFVDTPLCKG*TKYSQFSTMAKLLNI 71
            +F  G S F     +        + +   YD+L     PL     + ++ S   K++NI
Sbjct: 167 MVFDVGGSSFIPFNVLNNQEEDPHTSAKDFYDLLSTARQPLSPSCVEETELSYALKMMNI 226

Query: 70  KSENNIFEKCYDQILQ 23
           K+  NI +   DQI +
Sbjct: 227 KATFNIPQLAMDQIFE 242


>gb|AAS79612.1| putative tnp2 transposase [Ipomoea trifida]
          Length = 651

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/136 (33%), Positives = 66/136 (48%)
 Frame = -3

Query: 430 AKCKNLNYLKEDDMKLHLYKLGFLPNYHNWTVHGEPLIGY*PIVREGSSTRNVESNTYRE 251
           +KCKN  +L  D++++HLYK GF P Y  WT HGEP+    P V E       ESN Y  
Sbjct: 44  SKCKNRVHLSADEVRVHLYKKGFEPYYWVWTCHGEPI----PTVNEQFQETRNESNQYET 99

Query: 250 GIF*CGWSEF*TRCGVLQL**GT*S*SSRVYDILKFVDTPLCKG*TKYSQFSTMAKLLNI 71
            +F  G S F     +        + +   YD+L     PL     + ++ S   K++NI
Sbjct: 100 MVFDVGGSSFIPFNVLNNQEEDPHTSAKDFYDLLSTARQPLSPSCVEETELSYALKMMNI 159

Query: 70  KSENNIFEKCYDQILQ 23
           K+  NI +   DQI +
Sbjct: 160 KATFNIPQLAMDQIFE 175


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