BLASTX nr result

ID: Catharanthus23_contig00036193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00036193
         (235 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006342601.1| PREDICTED: protein LYK5-like [Solanum tubero...    73   5e-11
ref|XP_004252782.1| PREDICTED: protein LYK5-like [Solanum lycope...    73   5e-11
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...    57   3e-06
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|5...    56   6e-06

>ref|XP_006342601.1| PREDICTED: protein LYK5-like [Solanum tuberosum]
          Length = 496

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 18/94 (19%)
 Frame = +3

Query: 3   MFELITGKDAVI------------------GENATDGLRNFLETDLRERGDTEYASQVMN 128
           + EL+TGKDAVI                  GENA   L  F++ D+RE  D E A  V N
Sbjct: 398 LLELVTGKDAVIVEESGEILLSAAVAAIMEGENAEIELDGFIKADMREDDDLEIAFSVAN 457

Query: 129 LSLRCLMQNPEDRPRMDDVVSTLIKIQRNLQKSD 230
           LSLRCL + P +RP M+++VS L+KIQ N+ K++
Sbjct: 458 LSLRCLTREPTNRPSMEELVSCLLKIQVNVHKAE 491


>ref|XP_004252782.1| PREDICTED: protein LYK5-like [Solanum lycopersicum]
          Length = 599

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 18/94 (19%)
 Frame = +3

Query: 3   MFELITGKDAVI------------------GENATDGLRNFLETDLRERGDTEYASQVMN 128
           + EL+TGKDAVI                  GENA   L  F++ D+RE  D E A  V N
Sbjct: 506 LLELVTGKDAVIVEESGEILLSAAVAAIMEGENAEIELDGFIKADMREDSDLEIAISVAN 565

Query: 129 LSLRCLMQNPEDRPRMDDVVSTLIKIQRNLQKSD 230
           LSLRCL + P +RP M++ VS L+KIQ N+ K++
Sbjct: 566 LSLRCLTREPTNRPSMEETVSCLLKIQVNVHKAE 599


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 18/94 (19%)
 Frame = +3

Query: 3   MFELITGKDAVIGENATDGLRNFLETDLRERGDTEY------------------ASQVMN 128
           M ELITGKDAVI +N  + L +     + ERG+ E                   A+++  
Sbjct: 525 MLELITGKDAVIIQNEEEVLLSEAMISIMERGNAEIELGHFLDPCLLGNNGIESATRIAK 584

Query: 129 LSLRCLMQNPEDRPRMDDVVSTLIKIQRNLQKSD 230
           LS+ CL ++   RP M +VVSTL+KIQ + QKS+
Sbjct: 585 LSIACLTKDQARRPSMGEVVSTLLKIQVDQQKSE 618


>ref|XP_002326901.1| predicted protein [Populus trichocarpa]
           gi|566202355|ref|XP_006375051.1| hypothetical protein
           POPTR_0014s03940g [Populus trichocarpa]
           gi|550323365|gb|ERP52848.1| hypothetical protein
           POPTR_0014s03940g [Populus trichocarpa]
          Length = 609

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
 Frame = +3

Query: 3   MFELITGKDAVIGENATDGLRN------------------FLETDLRERGDTEYASQVMN 128
           + ELITGKDAV  ++  + L +                  F++  L+    T +A  +  
Sbjct: 517 LLELITGKDAVFTQDGREALLSTEIFSIMENKNPEVELDFFVDPALKGSCGTNFALCLAK 576

Query: 129 LSLRCLMQNPEDRPRMDDVVSTLIKIQRNLQKS 227
           +S+ CLM+ P  RP M++VVS L+KIQ N+QKS
Sbjct: 577 VSVACLMKEPARRPSMEEVVSVLLKIQANVQKS 609


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