BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00036049
         (264 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]    63   4e-08
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
emb|CBI18516.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +1

Query: 55  LLPQKLIKLRAFFHMGLSKNFTDRAKNGASRTRISTKQKPGIGEEIEKSIYAILTIDRWE 234
           LL  KL+KLRAF H+G S+   +R     +++R     +   G ++E SIY ILTIDRWE
Sbjct: 15  LLSHKLLKLRAFSHLGFSEYVKERLGXDDAKSRAWNTTQTS-GSDVESSIYTILTIDRWE 73

Query: 235 SLNHILY 255
           SLNH+ Y
Sbjct: 74  SLNHMAY 80


>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Vitis vinifera]
          Length = 2037

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +1

Query: 55  LLPQKLIKLRAFFHMGLSKNFTDRAKNGASRTRISTKQKPGIGEEIEKSIYAILTIDRWE 234
           LL  KL+KLRAF H+G S+   +R     +++R     +   G ++E SIY ILTIDRWE
Sbjct: 766 LLSHKLLKLRAFSHLGFSEYVKERLGVDDAKSRAWNTTQTS-GSDVESSIYTILTIDRWE 824

Query: 235 SLNHILY 255
           SLNH+ Y
Sbjct: 825 SLNHMAY 831


>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +1

Query: 55  LLPQKLIKLRAFFHMGLSKNFTDRAKNGASRTRISTKQKPGIGEEIEKSIYAILTIDRWE 234
           LL  KL+KLRAF H+G S+   +R     +++R     +   G ++E SIY ILTIDRWE
Sbjct: 15  LLSHKLLKLRAFSHLGFSEYVKERLGVDDAKSRAWNTTQTS-GSDVESSIYTILTIDRWE 73

Query: 235 SLNHILY 255
           SLNH+ Y
Sbjct: 74  SLNHMAY 80


>ref|XP_004295188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/78 (43%), Positives = 41/78 (52%)
 Frame = +1

Query: 28  MPSFLNSGILLPQKLIKLRAFFHMGLSKNFTDRAKNGASRTRISTKQKPGIGEEIEKSIY 207
           +PS       +   + K RAF   G S N     K    R R  T      G E+EKSIY
Sbjct: 2   LPSKTKQLCQISHTISKFRAF-QAGPSHNVRSNLKENGFRNRAQTS-----GSEMEKSIY 55

Query: 208 AILTIDRWESLNHILYRI 261
           +ILTIDRWESLNH+ YR+
Sbjct: 56  SILTIDRWESLNHMEYRL 73