BLASTX nr result

ID: Catharanthus23_contig00034353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00034353
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera...   144   1e-32
gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus pe...   143   3e-32
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235...   143   3e-32
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]                  142   5e-32
ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria ...   142   5e-32
dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thalia...   142   6e-32
ref|XP_006407578.1| hypothetical protein EUTSA_v10019985mg [Eutr...   142   6e-32
ref|XP_006299607.1| hypothetical protein CARUB_v10015786mg [Caps...   142   6e-32
ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana] gi|313...   142   6e-32
gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidops...   142   6e-32
ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3...   141   8e-32
ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1...   141   8e-32
ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2...   141   8e-32
ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1...   141   8e-32
gb|ESW15729.1| hypothetical protein PHAVU_007G097100g [Phaseolus...   141   8e-32
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr...   141   1e-31
ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5...   140   2e-31
ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4...   140   2e-31
ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arab...   140   2e-31
dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group] gi|12...   139   3e-31

>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
            gi|296085990|emb|CBI31431.3| unnamed protein product
            [Vitis vinifera]
          Length = 1026

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV EMLGSTD+NE LQ MMKDPFGNYVVQKV
Sbjct: 912  QIVKMSQQKFASNVVEKCLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQKV 971

Query: 62   LDTCDDQSRELIISRIKVHL 3
            ++TCDDQ+RELI+SRIKVHL
Sbjct: 972  IETCDDQTRELILSRIKVHL 991


>gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
          Length = 1021

 Score =  143 bits (360), Expect = 3e-32
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FG PEER+ LV+EMLGSTD+NE LQAMMKDPFGNYVVQKV
Sbjct: 907  QIVKMSQQKFASNVVEKCLTFGSPEERQFLVNEMLGSTDENEPLQAMMKDPFGNYVVQKV 966

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS ELI+SRIKVHL
Sbjct: 967  LETCDDQSLELILSRIKVHL 986


>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
            pumilio, putative [Ricinus communis]
          Length = 1024

 Score =  143 bits (360), Expect = 3e-32
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER+ILV+EMLGSTD+NE LQ MMKDPFGNYVVQKV
Sbjct: 907  QIVKMSQQKFASNVVEKCLIFGGPEERQILVNEMLGSTDENEPLQVMMKDPFGNYVVQKV 966

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIK+HL
Sbjct: 967  LETCDDRSLELILSRIKIHL 986


>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
          Length = 1026

 Score =  142 bits (358), Expect = 5e-32
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER+ILV+EMLGSTD+NE LQAMMKD FGNYVVQKV
Sbjct: 912  QIVKMSQQKFASNVVEKCLTFGGPEERQILVNEMLGSTDENEPLQAMMKDQFGNYVVQKV 971

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 972  LETCDDRSLELILSRIKVHL 991


>ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria vesca subsp. vesca]
          Length = 1022

 Score =  142 bits (358), Expect = 5e-32
 Identities = 70/80 (87%), Positives = 74/80 (92%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FG PEER+ LV EMLGSTD+NE LQAMMKDPFGNYVVQKV
Sbjct: 905  QIVKMSQQKFASNVVEKCLIFGSPEERQFLVKEMLGSTDENEPLQAMMKDPFGNYVVQKV 964

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS ELI+SRIKVHL
Sbjct: 965  LETCDDQSLELIVSRIKVHL 984


>dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
           gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis
           thaliana]
          Length = 330

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 242 QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
           QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 212 QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 271

Query: 62  LDTCDDQSRELIISRIKVHL 3
           L+TCDDQS  LI+SRIKVHL
Sbjct: 272 LETCDDQSLALILSRIKVHL 291


>ref|XP_006407578.1| hypothetical protein EUTSA_v10019985mg [Eutrema salsugineum]
            gi|557108724|gb|ESQ49031.1| hypothetical protein
            EUTSA_v10019985mg [Eutrema salsugineum]
          Length = 999

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 877  QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 936

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS  LI+SRIKVHL
Sbjct: 937  LETCDDQSLALILSRIKVHL 956


>ref|XP_006299607.1| hypothetical protein CARUB_v10015786mg [Capsella rubella]
            gi|482568316|gb|EOA32505.1| hypothetical protein
            CARUB_v10015786mg [Capsella rubella]
          Length = 1002

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 884  QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 943

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS  LI+SRIKVHL
Sbjct: 944  LETCDDQSLALILSRIKVHL 963


>ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
            gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio
            homolog 4; Short=APUM-4; Short=AtPUM4
            gi|332641375|gb|AEE74896.1| protein pumilio 4
            [Arabidopsis thaliana]
          Length = 1003

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 885  QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 944

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS  LI+SRIKVHL
Sbjct: 945  LETCDDQSLALILSRIKVHL 964


>gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
          Length = 1031

 Score =  142 bits (357), Expect = 6e-32
 Identities = 69/80 (86%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 885  QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 944

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS  LI+SRIKVHL
Sbjct: 945  LETCDDQSLALILSRIKVHL 964


>ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3 [Glycine max]
          Length = 982

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG PEER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 872  QIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 931

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 932  LETCDDRSLELILSRIKVHL 951


>ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
            gi|571568627|ref|XP_006606262.1| PREDICTED: pumilio
            homolog 4-like isoform X2 [Glycine max]
          Length = 983

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG PEER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 873  QIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 932

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 933  LETCDDRSLELILSRIKVHL 952


>ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2 [Glycine max]
          Length = 983

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG PEER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 873  QIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 932

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 933  LETCDDRSLELILSRIKVHL 952


>ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
          Length = 984

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG PEER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 874  QIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 933

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 934  LETCDDRSLELILSRIKVHL 953


>gb|ESW15729.1| hypothetical protein PHAVU_007G097100g [Phaseolus vulgaris]
          Length = 928

 Score =  141 bits (356), Expect = 8e-32
 Identities = 68/80 (85%), Positives = 77/80 (96%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG PEER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 818  QIVKMSQQKFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 877

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDD+S ELI+SRIKVHL
Sbjct: 878  LETCDDRSLELILSRIKVHL 897


>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
            gi|567887890|ref|XP_006436467.1| hypothetical protein
            CICLE_v10030594mg [Citrus clementina]
            gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
            homolog 4-like isoform X1 [Citrus sinensis]
            gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
            homolog 4-like isoform X2 [Citrus sinensis]
            gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
            homolog 4-like isoform X3 [Citrus sinensis]
            gi|557538662|gb|ESR49706.1| hypothetical protein
            CICLE_v10030594mg [Citrus clementina]
            gi|557538663|gb|ESR49707.1| hypothetical protein
            CICLE_v10030594mg [Citrus clementina]
          Length = 1029

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/80 (83%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIV+MSQQKFASNVVEKCL FG PEER++L++EMLGSTD+NE LQAMMKDPFGNYVVQKV
Sbjct: 915  QIVRMSQQKFASNVVEKCLTFGSPEERQLLINEMLGSTDENEPLQAMMKDPFGNYVVQKV 974

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS ELI+SRI+VHL
Sbjct: 975  LETCDDQSLELILSRIRVHL 994


>ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5 [Cicer arietinum]
          Length = 981

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG  EER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 871  QIVKMSQQKFASNVIEKCLAFGSSEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 930

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS ELI+SRIKVHL
Sbjct: 931  LETCDDQSLELILSRIKVHL 950


>ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4 [Cicer arietinum]
          Length = 982

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNV+EKCLAFG  EER+ILV+EMLG++D+NE LQAMMKDPFGNYVVQKV
Sbjct: 872  QIVKMSQQKFASNVIEKCLAFGSSEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKV 931

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQS ELI+SRIKVHL
Sbjct: 932  LETCDDQSLELILSRIKVHL 951


>ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
            lyrata] gi|297330630|gb|EFH61049.1| hypothetical protein
            ARALYDRAFT_897212 [Arabidopsis lyrata subsp. lyrata]
          Length = 1005

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL FGGPEER++LV+EMLG TD+NE LQAMMKDPFGNYVVQKV
Sbjct: 887  QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 946

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TC+DQS  LI+SRIKVHL
Sbjct: 947  LETCNDQSLALILSRIKVHL 966


>dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
            gi|125541647|gb|EAY88042.1| hypothetical protein
            OsI_09469 [Oryza sativa Indica Group]
            gi|125584167|gb|EAZ25098.1| hypothetical protein
            OsJ_08892 [Oryza sativa Japonica Group]
          Length = 1001

 Score =  139 bits (351), Expect = 3e-31
 Identities = 67/80 (83%), Positives = 76/80 (95%)
 Frame = -1

Query: 242  QIVKMSQQKFASNVVEKCLAFGGPEERKILVDEMLGSTDDNEALQAMMKDPFGNYVVQKV 63
            QIVKMSQQKFASNVVEKCL+FG PEER+IL++EMLG+TD+NE LQAMMKD F NYVVQKV
Sbjct: 888  QIVKMSQQKFASNVVEKCLSFGSPEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKV 947

Query: 62   LDTCDDQSRELIISRIKVHL 3
            L+TCDDQ+RELI+SRIKVHL
Sbjct: 948  LETCDDQNRELILSRIKVHL 967


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