BLASTX nr result

ID: Catharanthus23_contig00034201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00034201
         (330 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307626.1| F-box family protein [Populus trichocarpa] g...    89   8e-16
ref|XP_006352754.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    86   5e-15
ref|XP_002300803.1| F-box family protein [Populus trichocarpa] g...    85   1e-14
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...    84   3e-14
gb|EXB26571.1| F-box/LRR-repeat protein 17 [Morus notabilis]           82   7e-14
ref|XP_004292183.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    80   2e-13
ref|XP_004242349.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    80   3e-13
ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...    79   6e-13
ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    77   2e-12
ref|XP_006443916.1| hypothetical protein CICLE_v10019274mg [Citr...    77   2e-12
ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    77   2e-12
gb|EMJ00451.1| hypothetical protein PRUPE_ppa022491mg, partial [...    75   7e-12
gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]           74   1e-11
gb|EPS68979.1| hypothetical protein M569_05789, partial [Genlise...    74   3e-11
ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    70   3e-10
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    70   4e-10
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    70   4e-10
ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    70   4e-10
ref|XP_006403551.1| hypothetical protein EUTSA_v10010227mg [Eutr...    69   5e-10
ref|XP_006290790.1| hypothetical protein CARUB_v10016893mg [Caps...    68   1e-09

>ref|XP_002307626.1| F-box family protein [Populus trichocarpa]
           gi|222857075|gb|EEE94622.1| F-box family protein
           [Populus trichocarpa]
          Length = 588

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 53/112 (47%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           H CHLP +       TP+   T S V             RQ  SNLRRALSFDD D+   
Sbjct: 49  HVCHLPPS----TTTTPTQTPTDSSVSVSTSTSRPPPPSRQQHSNLRRALSFDDTDLR-C 103

Query: 181 XXXXXXXXXXXSDLI--GSGKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                       DL   GSGKLP++C+WEIL+RLPP  LL+AA VCKGWRET
Sbjct: 104 ESSDIEIDESELDLFDSGSGKLPVSCMWEILRRLPPEGLLAAARVCKGWRET 155


>ref|XP_006352754.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum tuberosum]
          Length = 590

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 51/120 (42%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDST--CSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVN 174
           H C+ P+ +      +P+ DS+   S               R     LRRALSFDD+DVN
Sbjct: 41  HVCNFPKNLNPIDNPSPNPDSSLLASPPPVVRPQPPPPMPQRHVLPQLRRALSFDDVDVN 100

Query: 175 DXXXXXXXXXXXX----SDLIGSGK----LPMACLWEILKRLPPPALLSAAGVCKGWRET 330
           D                SDL+GSG     LP +CLWE+ KRLPPPALLS+A VCKGW ET
Sbjct: 101 DSPGSDDDGEFSDLDNESDLVGSGSGIGTLPSSCLWEVFKRLPPPALLSSARVCKGWSET 160


>ref|XP_002300803.1| F-box family protein [Populus trichocarpa]
           gi|222842529|gb|EEE80076.1| F-box family protein
           [Populus trichocarpa]
          Length = 588

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 53/113 (46%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPS-TDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVND 177
           H CHLP         T + TDS+ SV              RQ  SNLRRALSFDD D+  
Sbjct: 49  HVCHLPPTSTTTTTPTQTPTDSSVSV-----STSTSRPPPRQQYSNLRRALSFDDSDLR- 102

Query: 178 XXXXXXXXXXXXSDLIGSG--KLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                        DL GSG  KLP++C+WEIL+RLPP  LL+A  VCKGWRET
Sbjct: 103 CDSPEVEIDESEMDLFGSGCGKLPVSCMWEILRRLPPAGLLAAGSVCKGWRET 155


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           H+CHLP      +    S DS+ +               RQ  S+LRRALSFDDID+   
Sbjct: 52  HTCHLPPHPATASTTPTSADSSSASTSRPLPLP------RQQYSHLRRALSFDDIDIR-C 104

Query: 181 XXXXXXXXXXXSDLIGSG--KLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                       DL GSG  +LP +C+WE+L+RLPP  LL+AA VCKGWR+T
Sbjct: 105 DSPEPEMDESELDLFGSGSGRLPASCMWEVLRRLPPAGLLAAARVCKGWRDT 156


>gb|EXB26571.1| F-box/LRR-repeat protein 17 [Morus notabilis]
          Length = 604

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 50/121 (41%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           HSCH+       +AAT  TD+   V              RQ  S+LRRALSFDD+D    
Sbjct: 60  HSCHV------SSAATTPTDACADVSAQYSMSSTRPPPPRQPYSHLRRALSFDDVDNVGG 113

Query: 181 XXXXXXXXXXXSDLIG-----------SGKLPMACLWEILKRLPPPALLSAAGVCKGWRE 327
                       D  G           SG LP +C+WE+L+RLPP  LLSAA VCKGWRE
Sbjct: 114 FDVPEEEVEDEEDGFGATMEEMESDPVSGGLPASCVWEVLRRLPPSGLLSAAKVCKGWRE 173

Query: 328 T 330
           T
Sbjct: 174 T 174


>ref|XP_004292183.1| PREDICTED: F-box/LRR-repeat protein 17-like [Fragaria vesca subsp.
           vesca]
          Length = 598

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/119 (42%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           H CH+ R     + A    D+  S+              RQ  SNLRRALSFDD++ +  
Sbjct: 47  HVCHV-RVAAAESGADSHPDTPISITRTPALLPPPPP--RQPYSNLRRALSFDDVESSGY 103

Query: 181 XXXXXXXXXXXSDLI---------GSGKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                       D I         G G LPM+CLWEIL+RLPPP LLSAA VC+GWRET
Sbjct: 104 GDSDAPDPDPDLDEIEDTEMDWDMGWGGLPMSCLWEILRRLPPPGLLSAAMVCRGWRET 162


>ref|XP_004242349.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
          Length = 591

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
 Frame = +1

Query: 1   HSCHLPRAIG--GGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVN 174
           H C+ P+ +      +  P++    S               R     LRRALSFDD+DVN
Sbjct: 41  HVCNFPKNLNPIDNPSPNPNSSLLASPPSVVRPQPPPPLPQRHVLPQLRRALSFDDVDVN 100

Query: 175 DXXXXXXXXXXXX----SDLIGSGK----LPMACLWEILKRLPPPALLSAAGVCKGWRET 330
           D                SD +GSG     LP +CLWE+ KRLPPPALLS+A VCKGW E+
Sbjct: 101 DSPGSDDEGDFSDLDNESDRVGSGSGIGTLPSSCLWEVFKRLPPPALLSSARVCKGWLES 160


>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
           gi|297735494|emb|CBI17934.3| unnamed protein product
           [Vitis vinifera]
          Length = 574

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 50/114 (43%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           HSC+L        AATP TDS+ S               RQ  ++LRRALSFDD DV   
Sbjct: 47  HSCNL------SGAATP-TDSSASTADPSP---------RQQYTHLRRALSFDDSDVRRS 90

Query: 181 XXXXXXXXXXXSDLIGS----GKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                       +  GS    G LP +CLWE+++RLPP A+L+AA VCKGWRET
Sbjct: 91  AGAEEEVVVEDEEEAGSELGGGGLPASCLWEVMRRLPPAAMLAAAQVCKGWRET 144


>ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum tuberosum]
          Length = 595

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
 Frame = +1

Query: 118 RQACSNLRRALSFDDIDVNDXXXXXXXXXXXXS----------DLIGSGKLPMACLWEIL 267
           RQA   LRRALSFDDI V D                       DL GSGKLP  CLWE+ 
Sbjct: 82  RQAVPQLRRALSFDDIGVTDESPGSDDDEGVDEGEFLDFESELDLGGSGKLPANCLWEVF 141

Query: 268 KRLPPPALLSAAGVCKGWRE 327
           KRLPP +LLS+A VCKGWR+
Sbjct: 142 KRLPPSSLLSSAKVCKGWRD 161


>ref|XP_006443916.1| hypothetical protein CICLE_v10019274mg [Citrus clementina]
           gi|557546178|gb|ESR57156.1| hypothetical protein
           CICLE_v10019274mg [Citrus clementina]
          Length = 635

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
 Frame = +1

Query: 1   HSCHLPR-AIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVN- 174
           HSCH+   +     AATP+   + + +              Q  S  RRALSFD+ID+  
Sbjct: 91  HSCHVGTPSTPSPPAATPAPSDSSAAISAPTSLSASRPPRHQHYSRFRRALSFDNIDLTC 150

Query: 175 -DXXXXXXXXXXXXSDLIGSGKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                          D   SG LP A LWE+L+RLPPP LL+AA VCKGWRET
Sbjct: 151 ESPEPDFAIEELLDPDPELSGGLPAAALWEVLRRLPPPGLLAAAQVCKGWRET 203


>ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
          Length = 592

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 42/77 (54%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
 Frame = +1

Query: 118 RQACSNLRRALSFDDIDV-------NDXXXXXXXXXXXXSDLIGSGKLPMACLWEILKRL 276
           RQ    LRRALSFDDI V       +D             DL GSGKLP  CLWE+LKRL
Sbjct: 82  RQPVVQLRRALSFDDIGVTDESPGSDDEGEGEFLDFESELDLGGSGKLPANCLWEVLKRL 141

Query: 277 PPPALLSAAGVCKGWRE 327
           PP +LLS+A VCKGWR+
Sbjct: 142 PPSSLLSSAKVCKGWRD 158


>gb|EMJ00451.1| hypothetical protein PRUPE_ppa022491mg, partial [Prunus persica]
          Length = 581

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 57/126 (45%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVNDX 180
           HSCHLP A     A  PS  S  SV              R+  S+LRRALSFDD DV+  
Sbjct: 55  HSCHLPAADEAFVADVPSP-SDLSV---------PPLPPRKPYSHLRRALSFDD-DVDSS 103

Query: 181 XXXXXXXXXXXS---------DLI-----GSGK--LPMACLWEILKRLPPPALLSAAGVC 312
                      S         DL+     G+G   LP +CLW+ILKRLPPP LLSAA VC
Sbjct: 104 GWGGGGGGDFDSPDPDPDEIDDLVVDSESGTGLCGLPASCLWDILKRLPPPELLSAAMVC 163

Query: 313 KGWRET 330
           KGWRET
Sbjct: 164 KGWRET 169


>gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]
          Length = 602

 Score = 74.3 bits (181), Expect(2) = 1e-11
 Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
 Frame = +1

Query: 118 RQACSNLRRALSFDDIDVN----DXXXXXXXXXXXXSDL-----IGSGKLPMACLWEILK 270
           RQ  S+LRRALSFDDID+     +            +DL     I SG LP  CLWE+L+
Sbjct: 89  RQPYSHLRRALSFDDIDIRCDSPELDLDGYDSPFLGTDLDPDNEIVSGGLPAGCLWEVLR 148

Query: 271 RLPPPALLSAAGVCKGWRET 330
           RLPP  L++AA VCKGWRET
Sbjct: 149 RLPPAGLMAAARVCKGWRET 168



 Score = 20.8 bits (42), Expect(2) = 1e-11
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 26  SAAAPPPHRPRTQ 64
           S+AA PPH P  Q
Sbjct: 78  SSAARPPHHPPRQ 90


>gb|EPS68979.1| hypothetical protein M569_05789, partial [Genlisea aurea]
          Length = 566

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
 Frame = +1

Query: 139 RRALSFDDIDVNDXXXXXXXXXXXX---SDLIGSGKLPMACLWEILKRLPPPALLSAAGV 309
           RRALSFDD+   +               SDL  SGKLPM CLWE+ KRLPP AL SAA V
Sbjct: 90  RRALSFDDVSAAESVEEFETEGFDLDDGSDLERSGKLPMNCLWEVFKRLPPTALSSAAAV 149

Query: 310 CKGWRET 330
           C+GWRET
Sbjct: 150 CRGWRET 156


>ref|XP_003520190.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 590

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 49/125 (39%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDV--- 171
           H+C + + +   A ATP  DS+ SVV             R+  SNLRRALSFDD+D    
Sbjct: 43  HNCTV-KTLASTADATP--DSSLSVVSVPSAAAPSL---RKPSSNLRRALSFDDLDERLP 96

Query: 172 ------------NDXXXXXXXXXXXXSDLIGSGKLPMACLWEILKRLPPPALLSAAGVCK 315
                       +D            +D  G   LP   LWE+++RLPPP LLSAA VCK
Sbjct: 97  VVDRSEPDEEVDSDVFDETDPDLDLDADACG---LPARLLWEVMRRLPPPGLLSAAKVCK 153

Query: 316 GWRET 330
           GWR+T
Sbjct: 154 GWRDT 158


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
 Frame = +1

Query: 43  ATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDID---------VNDXXXXXX 195
           +TP+TDST S                 + S+LRRALSFD+ D         ++D      
Sbjct: 58  STPTTDSTNSA--------RGSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIEEAEP 109

Query: 196 XXXXXXSDLIGSGKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                  D   SG LP  CLWE+L+RLPP  +L+AA VCKGWRET
Sbjct: 110 VFDYPDIDPDSSGCLPATCLWEVLRRLPPTGILAAARVCKGWRET 154


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/105 (40%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
 Frame = +1

Query: 43  ATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDID---------VNDXXXXXX 195
           +TP+TDST S                 + S+LRRALSFD+ D         ++D      
Sbjct: 58  STPTTDSTNSA--------RGSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIEEAEP 109

Query: 196 XXXXXXSDLIGSGKLPMACLWEILKRLPPPALLSAAGVCKGWRET 330
                  D   SG LP  CLWE+L+RLPP  +L+AA VCKGWRET
Sbjct: 110 VFDYPDIDPDSSGCLPATCLWEVLRRLPPTGILAAARVCKGWRET 154


>ref|XP_003536920.1| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 592

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 49/122 (40%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
 Frame = +1

Query: 1   HSCHLPRAIGGGAAATPSTDSTCSVVXXXXXXXXXXXXXRQACSNLRRALSFDDIDVN-- 174
           H+C + +     AAATP  DS+ S+V             RQ+ SNL RALSFDD D    
Sbjct: 43  HNCTV-KTPASTAAATP--DSSLSIVSLPSSSAVPSL--RQSPSNLGRALSFDDFDEPAL 97

Query: 175 -------DXXXXXXXXXXXXSDL---IGSGKLPMACLWEILKRLPPPALLSAAGVCKGWR 324
                  D             DL     +G LP + +WE+++RLPPP LLSAA VCKGWR
Sbjct: 98  VVDRYEPDEKVDSDVFDETNPDLDLDADAGGLPASLMWEVMRRLPPPGLLSAAKVCKGWR 157

Query: 325 ET 330
           +T
Sbjct: 158 DT 159


>ref|XP_006403551.1| hypothetical protein EUTSA_v10010227mg [Eutrema salsugineum]
           gi|557104670|gb|ESQ45004.1| hypothetical protein
           EUTSA_v10010227mg [Eutrema salsugineum]
          Length = 592

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = +1

Query: 118 RQACSNLRRALSFDDIDVNDXXXXXXXXXXXX-------SDLIGSGKLPMACLWEILKRL 276
           RQ+ ++LRRALSFDDID  +                   +D++  G+     LWE+LKRL
Sbjct: 86  RQSFTHLRRALSFDDIDARNSLDEPDLDAATTDLDLHLDTDIVQPGRFHAVALWEVLKRL 145

Query: 277 PPPALLSAAGVCKGWRET 330
           PP +LL AA VCKGWRET
Sbjct: 146 PPSSLLMAARVCKGWRET 163


>ref|XP_006290790.1| hypothetical protein CARUB_v10016893mg [Capsella rubella]
           gi|482559497|gb|EOA23688.1| hypothetical protein
           CARUB_v10016893mg [Capsella rubella]
          Length = 594

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
 Frame = +1

Query: 118 RQACSNLRRALSFDDIDVNDXXXXXXXXXXXX-------SDLIGSGKLPMACLWEILKRL 276
           RQ+ ++LRRALSFDD+D  +                   +D++  G+     LWE+LKRL
Sbjct: 88  RQSFTHLRRALSFDDVDARNSLDEPDLDAASPDLDLHLDTDIVQPGRFHAVGLWEVLKRL 147

Query: 277 PPPALLSAAGVCKGWRET 330
           PP +LL AA VCKGWRET
Sbjct: 148 PPSSLLMAARVCKGWRET 165


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