BLASTX nr result

ID: Catharanthus23_contig00033374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033374
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303344.2| QUARTET 3 family protein [Populus trichocarp...    64   2e-08
ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
ref|XP_006387622.1| hypothetical protein POPTR_0760s00200g [Popu...    60   2e-07
gb|EOX96856.1| Pectin lyase-like superfamily protein isoform 1 [...    60   3e-07
ref|XP_006365001.1| PREDICTED: polygalacturonase QRT3-like [Sola...    58   2e-06
ref|XP_004233267.1| PREDICTED: polygalacturonase QRT3-like [Sola...    58   2e-06
emb|CBI27215.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti...    56   6e-06

>ref|XP_002303344.2| QUARTET 3 family protein [Populus trichocarpa]
           gi|550342612|gb|EEE78323.2| QUARTET 3 family protein
           [Populus trichocarpa]
          Length = 489

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = +2

Query: 2   NDQMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSS 181
           +DQM+ ++AFK SLL R  +                            +  PHVY+V+S 
Sbjct: 36  HDQMQNMKAFKHSLLTRRQLVTPTISSSPAPAPQAMNQPP--------ASRPHVYEVTS- 86

Query: 182 YGADPTGKTDSTEAIERAITDAFIKLNG--NGFLINGIVNL 298
           YGADPTGK DSTEA+ +AITDAF   NG   GFL+ GI NL
Sbjct: 87  YGADPTGKLDSTEALLKAITDAF---NGPSEGFLMKGIANL 124


>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
           gi|224137804|ref|XP_002326444.1| predicted protein
           [Populus trichocarpa] gi|566149282|ref|XP_006369048.1|
           QUARTET 3 family protein [Populus trichocarpa]
           gi|550347407|gb|ERP65617.1| QUARTET 3 family protein
           [Populus trichocarpa]
          Length = 496

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
 Frame = +2

Query: 2   NDQMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSS 181
           +DQM+K+QAFK SLL R  +                               P VY+V+S 
Sbjct: 44  HDQMQKMQAFKHSLLTRRQLATPPISSSPAPAPQATLQP--------TGSRPRVYQVTS- 94

Query: 182 YGADPTGKTDSTEAIERAITDAFIKLNG--NGFLINGIVNL 298
           YGADPTGK DSTEA+ +AI DAF   NG   GFL+ GI NL
Sbjct: 95  YGADPTGKVDSTEALLKAIADAF---NGPSEGFLMKGITNL 132


>ref|XP_006387622.1| hypothetical protein POPTR_0760s00200g [Populus trichocarpa]
           gi|550307889|gb|ERP46536.1| hypothetical protein
           POPTR_0760s00200g [Populus trichocarpa]
          Length = 451

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +2

Query: 155 PHVYKVSSSYGADPTGKTDSTEAIERAITDAFIKLNG--NGFLINGIVNL 298
           PHVY+V+S YGADPTGK DSTEA+ +AITDAF   NG   GFL+ GI NL
Sbjct: 41  PHVYEVTS-YGADPTGKLDSTEALLKAITDAF---NGPSEGFLMKGIANL 86


>gb|EOX96856.1| Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
          Length = 514

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +2

Query: 5   DQMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSSY 184
           +QMR++QAFK SL+ R++V                           A+  P VY+V+  Y
Sbjct: 43  EQMRQLQAFKASLIGRDSVSGSAISPSLSSARQLQ----------AAASVPRVYQVTK-Y 91

Query: 185 GADPTGKTDSTEAIERAITDAFIKL-NGNGFLINGIVNL 298
           GADPTGK DSTEA+ +AI DAF     G+  L++GI NL
Sbjct: 92  GADPTGKADSTEALNKAIADAFQSPGEGSWTLMDGITNL 130


>ref|XP_006365001.1| PREDICTED: polygalacturonase QRT3-like [Solanum tuberosum]
          Length = 481

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/97 (37%), Positives = 54/97 (55%)
 Frame = +2

Query: 8   QMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSSYG 187
           Q+RK+QAF   ++ R+++                          T + +P +Y ++S YG
Sbjct: 30  QLRKLQAFTAEIVHRDSISPFPSPSPTRFSPSPSSPSVV-----TVTPSPKIYHITS-YG 83

Query: 188 ADPTGKTDSTEAIERAITDAFIKLNGNGFLINGIVNL 298
           ADPTGK DST+AI +AI+DA ++   NGFL+ GI NL
Sbjct: 84  ADPTGKLDSTQAILQAISDA-LEGPSNGFLMQGISNL 119


>ref|XP_004233267.1| PREDICTED: polygalacturonase QRT3-like [Solanum lycopersicum]
          Length = 481

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 53/97 (54%)
 Frame = +2

Query: 8   QMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSSYG 187
           Q+RK+QAF   +  R+++                          T + +P VY V+S YG
Sbjct: 30  QLRKLQAFTAEIASRDSISPFPSPSPTRFSPSPSSPSVI-----TVTPSPKVYHVTS-YG 83

Query: 188 ADPTGKTDSTEAIERAITDAFIKLNGNGFLINGIVNL 298
           ADPTGK DST+AI +AI+DA ++   NGFL+ GI NL
Sbjct: 84  ADPTGKLDSTQAILQAISDA-LEGPSNGFLMQGISNL 119


>emb|CBI27215.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/99 (41%), Positives = 54/99 (54%)
 Frame = +2

Query: 2   NDQMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSS 181
           + QMRK++A KTSLL+R++V                          + S  P +Y V+S 
Sbjct: 73  SQQMRKMKALKTSLLRRDSVSLPPSSAAAP----------------SPSGTPRLYLVTS- 115

Query: 182 YGADPTGKTDSTEAIERAITDAFIKLNGNGFLINGIVNL 298
           YGADPTG  DSTEAI  A++DAF K   +G L+ GI NL
Sbjct: 116 YGADPTGVADSTEAILGALSDAF-KGPSDGVLMEGIANL 153


>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
          Length = 505

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/99 (40%), Positives = 52/99 (52%)
 Frame = +2

Query: 2   NDQMRKIQAFKTSLLQRNTVXXXXXXXXXXXXXXXXXXXXXXXXXXTASMNPHVYKVSSS 181
           + QMRK++A KTSLL+R++V                               P +Y V+S 
Sbjct: 40  SQQMRKMKALKTSLLRRDSVSLPPSSAAAPSPSGSPSQ---------VGSAPRLYLVTS- 89

Query: 182 YGADPTGKTDSTEAIERAITDAFIKLNGNGFLINGIVNL 298
           YGADPTG  DSTEAI  A++DAF K   +G L+ GI NL
Sbjct: 90  YGADPTGVADSTEAILGALSDAF-KGPSDGVLMEGIANL 127


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