BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033319
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...    72   1e-10
ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat...    65   7e-09
ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citr...    65   7e-09
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...    63   4e-08
gb|EXB55995.1| hypothetical protein L484_018781 [Morus notabilis]      63   5e-08
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...    61   1e-07
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...    61   2e-07
ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat...    58   1e-06
gb|EOX95371.1| Pentatricopeptide repeat superfamily protein isof...    57   2e-06
ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat...    57   3e-06
gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thal...    57   3e-06
ref|NP_171744.1| pentatricopeptide repeat-containing protein [Ar...    57   3e-06
ref|XP_006418341.1| hypothetical protein EUTSA_v10007463mg [Eutr...    56   4e-06
ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat...    56   6e-06

>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
 Frame = -1

Query: 283 ILKPISLHSLLSRTRTRYGLSVSLLFFSSIPRNMEEQFP-------FSQSSAQNDDVEAV 125
           ILKP+SL S      +RY  S+S +  +S P+N    F         ++++  N DVE V
Sbjct: 9   ILKPLSLQS-----SSRYAPSISTIGLNSNPQNPSSVFSRLYWSETIAETTVDNGDVETV 63

Query: 124 FRIITTS---KDVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           FRI++++   +++K+SLKS+   +  SNDLIDKVLKRVRFSH N
Sbjct: 64  FRIVSSASSTRNLKQSLKSSG--VFLSNDLIDKVLKRVRFSHGN 105


>ref|XP_006492377.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Citrus sinensis]
          Length = 506

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = -1

Query: 280 LKPISLHSLLSRTRTRYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITTS- 104
           LK  S  S LS+  T     +S L+FSS              S +NDDV+ +FRIIT+S 
Sbjct: 8   LKYASKLSFLSKNATSL---ISRLYFSS------------DISPKNDDVDTIFRIITSST 52

Query: 103 --KDVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
             K +K+SLKS+  +IS  NDL+DK+LKRVRFSH N
Sbjct: 53  SCKHLKQSLKSSEVNIS--NDLVDKILKRVRFSHGN 86


>ref|XP_006444562.1| hypothetical protein CICLE_v10019795mg [Citrus clementina]
           gi|557546824|gb|ESR57802.1| hypothetical protein
           CICLE_v10019795mg [Citrus clementina]
          Length = 506

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
 Frame = -1

Query: 280 LKPISLHSLLSRTRTRYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITTS- 104
           LK  S  S LS+  T     +S L+FSS              S +NDDV+ +FRIIT+S 
Sbjct: 8   LKYASKLSFLSKNATSL---ISRLYFSS------------DISPKNDDVDTIFRIITSST 52

Query: 103 --KDVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
             K +K+SLKS+  +IS  NDL+DK+LKRVRFSH N
Sbjct: 53  SCKHLKQSLKSSEVNIS--NDLVDKILKRVRFSHGN 86


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
 Frame = -1

Query: 283 ILKPISLHSLLSRTRTRYGLSV-SLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITT 107
           ILKP+   S  SR  ++  +S+ + LFFS+ P ++            NDDVE V+RIIT+
Sbjct: 2   ILKPLLFPSN-SRYISKTPISLLANLFFSTNPTSL------------NDDVEVVYRIITS 48

Query: 106 SKDVKESLKS-AATSISFSNDLIDKVLKRVRFSHSN 2
           S  V+   +S  +T I  SNDLIDKVLKRVRFSH N
Sbjct: 49  SSSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGN 84


>gb|EXB55995.1| hypothetical protein L484_018781 [Morus notabilis]
          Length = 486

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 SRTRT-RYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRII---TTSKDVKESL 83
           +++RT RY L    LF S +       F    + A ND V+ VFRII   T+SK++K+SL
Sbjct: 5   TQSRTFRYALQNPNLFISRL------FFCSETNPATNDPVDTVFRIISSSTSSKNMKQSL 58

Query: 82  KSAATSISFSNDLIDKVLKRVRFSHSN 2
           KS+   +  SNDLIDKVLKRVRFSH+N
Sbjct: 59  KSSG--VFLSNDLIDKVLKRVRFSHAN 83


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
 Frame = -1

Query: 214 LLFFSSIPRNMEEQFPFSQSS---AQNDDVEAVFRIITTSK---DVKESLKSAATSISFS 53
           L +FS IP ++    PFS S+   + + ++E VFRIITTS    D+K SL+S+   +  S
Sbjct: 13  LRYFSPIPLSIFYSHPFSSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSR--VFLS 70

Query: 52  NDLIDKVLKRVRFSHSN 2
           N+LID VLKRVRFSH N
Sbjct: 71  NELIDGVLKRVRFSHGN 87


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
 Frame = -1

Query: 214 LLFFSSIPRNMEEQFPFSQSS---AQNDDVEAVFRIITTSK---DVKESLKSAATSISFS 53
           L +FS IP ++    PFS S+   + + ++E VFRIITTS    D+K SL+S+   +  S
Sbjct: 13  LRYFSPIPLSIFFSHPFSSSTDNQSLHQNIETVFRIITTSSSSTDMKHSLESSR--VFLS 70

Query: 52  NDLIDKVLKRVRFSHSN 2
           N+LID VLKRVRFSH N
Sbjct: 71  NELIDGVLKRVRFSHGN 87


>ref|XP_004251431.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Solanum lycopersicum]
          Length = 500

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 36/58 (62%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
 Frame = -1

Query: 163 SQSSAQND-DVEAVFRIIT---TSKDVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           SQSSA  D +VE ++RIIT   T + +K++LKS+   I  SNDLIDKVLKRVRFSHSN
Sbjct: 30  SQSSAPIDKEVETLYRIITITQTPEGLKQALKSS--QIKLSNDLIDKVLKRVRFSHSN 85


>gb|EOX95371.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 511

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = -1

Query: 259 SLLSRTRTRYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRII---TTSKDVKE 89
           SL  ++ +RY  S S L F          F    +   +DDV+ V+RII   T+SK++ +
Sbjct: 6   SLSHQSPSRYVSSFSFLPFKF--------FCSDSNPPSSDDVDIVYRIIASSTSSKNLTQ 57

Query: 88  SLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           SLKS  T I  SN LIDKVLKRVRFSH N
Sbjct: 58  SLKS--TGIFLSNGLIDKVLKRVRFSHGN 84


>ref|XP_006340302.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Solanum tuberosum]
          Length = 505

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
 Frame = -1

Query: 163 SQSSAQND-DVEAVFRIITTSKD---VKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           SQSSA  D +VE ++RIIT ++    +K++LKS+   I  SNDLIDKVLKRVRFSHSN
Sbjct: 30  SQSSAPIDKEVETLYRIITVTQSPEGLKQALKSS--QIKLSNDLIDKVLKRVRFSHSN 85


>gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
          Length = 490

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -1

Query: 283 ILKPISLHSLLSRTRTRYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITTS 104
           ILKP+S H +     + + LSVS L   ++    + + P  +   + DD E VFR+I  S
Sbjct: 3   ILKPLSSHHV-----SNFRLSVSFLHSVALS---DAKVPVEE---EGDDAETVFRMINGS 51

Query: 103 K---DVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
               ++KESL S+   I  S DLID+VLKRVRFSH N
Sbjct: 52  NLQVELKESLSSSG--IHLSKDLIDRVLKRVRFSHGN 86


>ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g02420 gi|332189307|gb|AEE27428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 491

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -1

Query: 283 ILKPISLHSLLSRTRTRYGLSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITTS 104
           ILKP+S H +     + + LSVS L   ++    + + P  +   + DD E VFR+I  S
Sbjct: 4   ILKPLSSHHV-----SNFRLSVSFLHSVALS---DAKVPVEE---EGDDAETVFRMINGS 52

Query: 103 K---DVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
               ++KESL S+   I  S DLID+VLKRVRFSH N
Sbjct: 53  NLQVELKESLSSSG--IHLSKDLIDRVLKRVRFSHGN 87


>ref|XP_006418341.1| hypothetical protein EUTSA_v10007463mg [Eutrema salsugineum]
           gi|557096112|gb|ESQ36694.1| hypothetical protein
           EUTSA_v10007463mg [Eutrema salsugineum]
          Length = 494

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 ILKPISLHSLLSRTRTRYG-LSVSLLFFSSIPRNMEEQFPFSQSSAQNDDVEAVFRIITT 107
           ILKP+S     S+  +R+  L +S  F  S+  +  E+ P  ++    DD E VFR+I  
Sbjct: 4   ILKPLS-----SQCVSRFSNLRLSASFLHSVAISSNEKLPAEEA----DDAETVFRMING 54

Query: 106 SK---DVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           S    ++KESL S+   I  S DLI++VLKRVRFSH N
Sbjct: 55  SNLQGELKESLSSSG--IHLSKDLIERVLKRVRFSHGN 90


>ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Glycine max]
          Length = 500

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
 Frame = -1

Query: 157 SSAQNDDVEAVFRIIT---TSKDVKESLKSAATSISFSNDLIDKVLKRVRFSHSN 2
           SS QNDDV+ VF I++   T + +K+SLKS+   +  SND+ID+VLKRVRFSH N
Sbjct: 27  SSNQNDDVQKVFGILSSTSTPEQLKQSLKSSG--VFLSNDVIDQVLKRVRFSHGN 79