BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033197
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              43   3e-07
ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624...    44   6e-07
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              40   2e-06
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    39   3e-06
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    39   3e-06

>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 43.1 bits (100), Expect(2) = 3e-07
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -2

Query: 230 DGYKNTNTINQGEKKFIHKPLTPKQVHDDQVIMQTNRDKREREL-RSKVKNEKKEGDGLE 54
           DGY N  +    ++K    PL P +V +DQ  M    D+  +E  + K KNEKK+ D  E
Sbjct: 466 DGYSNKYSFMYHDQKINLVPLNPSEVREDQRKMSEKYDQERKEKEKEKEKNEKKKNDKRE 525

Query: 53  KNQ 45
           K Q
Sbjct: 526 KKQ 528



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -3

Query: 298 VVPVQAGHILSGRPWQYDRR 239
           VVP++A H+L GRPWQ+DR+
Sbjct: 443 VVPMEASHLLLGRPWQFDRK 462


>ref|XP_006494982.1| PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
          Length = 1083

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = -3

Query: 298 VVPVQAGHILSGRPWQYDRRV 236
           VVP+ AGHIL GRPWQYDRRV
Sbjct: 310 VVPMHAGHILLGRPWQYDRRV 330



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = -2

Query: 230 DGYKNTNTINQGEKKFIHKPLTPKQVHDDQVIMQTNRDKRERELRSKVKNEKK 72
           DGY N  +    ++K    PLTP+QV++DQ+ +   +++++  L +K    K+
Sbjct: 333 DGYLNRYSFVINKRKITLVPLTPRQVYEDQINIVERKERQQVNLFAKESEVKR 385


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = -2

Query: 230 DGYKNTNTINQGEKKFIHKPLTPKQVHDDQVIMQTNRDKRERELRSKVKNEKKEGDGLEK 51
           DGY N  +    ++K    PL P +V +DQ  M+   D+  +E   + + EK++    EK
Sbjct: 466 DGYSNKYSFMYHDQKINLVPLNPSEVREDQRKMREKYDQERKEKEKEKEKEKEKEKVKEK 525

Query: 50  NQEEK 36
           N+++K
Sbjct: 526 NEKKK 530



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = -3

Query: 298 VVPVQAGHILSGRPWQYDRR 239
           VVP++A H+L GRPWQ+DR+
Sbjct: 443 VVPMEASHLLLGRPWQFDRK 462


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
 Frame = -2

Query: 227 GYKNTNTINQGEKKFIHKPLTPKQVHDDQVIMQTNRDKRERELRSKVKNE------KKEG 66
           G KN  ++    KK+   PL+P QV +DQ  ++    K++ E++S+++ +      +K+ 
Sbjct: 524 GRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIEKKK 583

Query: 65  DGLEKNQE 42
           DG EK +E
Sbjct: 584 DGREKERE 591



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 298 VVPVQAGHILSGRPWQYDR 242
           VVP+QA H+L GRPWQYDR
Sbjct: 500 VVPMQACHVLLGRPWQYDR 518


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
 Frame = -2

Query: 227 GYKNTNTINQGEKKFIHKPLTPKQVHDDQVIMQTNRDKRERELRSKVKNE------KKEG 66
           G KN  ++    KK+   PL+P QV +DQ  ++    K++ E++S+++ +      +K+ 
Sbjct: 524 GRKNRYSLLHNGKKYTLAPLSPSQVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIEKKK 583

Query: 65  DGLEKNQE 42
           DG EK +E
Sbjct: 584 DGREKERE 591



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -3

Query: 298 VVPVQAGHILSGRPWQYDR 242
           VVP+QA H+L GRPWQYDR
Sbjct: 500 VVPMQACHVLLGRPWQYDR 518