BLASTX nr result

ID: Catharanthus23_contig00033102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033102
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75974.1| hypothetical protein VITISV_028848 [Vitis vinifera]    48   2e-07

>emb|CAN75974.1| hypothetical protein VITISV_028848 [Vitis vinifera]
          Length = 463

 Score = 48.1 bits (113), Expect(3) = 2e-07
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = -3

Query: 336 RYLGTSKSYVRNRSCPEGCTVEGYVARSACHF 241
           RYL T KSYVRN+SCPEG  VEGY+A+    F
Sbjct: 28  RYLHTLKSYVRNKSCPEGSIVEGYIAKECTTF 59



 Score = 28.9 bits (63), Expect(3) = 2e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 259 KECLSFCFLYLADYGDTKFNRVGRNEDVEENEQDSG 152
           KEC +FC  YL D  +TK +R  +N  +E N  + G
Sbjct: 54  KECTTFCPRYLHDV-ETKHDREEKNYVIENNITNGG 88



 Score = 22.7 bits (47), Expect(3) = 2e-07
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 101 ILLRKQLERQHLYLLFKCQTI*PYIE 24
           +L  ++  + HLY+L  C+ +  +IE
Sbjct: 107 VLSTEEWSQAHLYVLTNCEEVTSFIE 132


Top