BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00033018
         (369 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233864.1| PREDICTED: pentatricopeptide repeat-containi...    79   6e-13
ref|XP_006355631.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
ref|XP_002519753.1| pentatricopeptide repeat-containing protein,...    67   2e-09
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
emb|CBI30808.3| unnamed protein product [Vitis vinifera]               59   7e-07
gb|EMJ15803.1| hypothetical protein PRUPE_ppa003001mg [Prunus pe...    58   1e-06
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|5...    58   1e-06
gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protei...    56   4e-06
ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_004233864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Solanum lycopersicum]
          Length = 688

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/63 (55%), Positives = 52/63 (82%)
 Frame = +2

Query: 176 IAKLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEAL 355
           +A+   + +PT  S+L++ LKN++ D+A+++FERI +P++YLCTKMIAGYAE  RLNEAL
Sbjct: 18  LARFYRVASPTCYSILSEHLKNQRIDEAKELFERIPSPNIYLCTKMIAGYAENLRLNEAL 77

Query: 356 ELF 364
           +LF
Sbjct: 78  QLF 80


>ref|XP_006355631.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Solanum tuberosum]
          Length = 688

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +2

Query: 176 IAKLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEAL 355
           +A+   + +PT  S+L+D LKNR+ D+A+++FERI +P++YLCTKMI GYAE  RLNEAL
Sbjct: 18  LARFFRVTSPTCYSILSDHLKNRRIDEAKELFERIPSPNIYLCTKMIDGYAENLRLNEAL 77

Query: 356 ELF 364
            LF
Sbjct: 78  TLF 80


>ref|XP_002519753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541170|gb|EEF42726.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 562

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +2

Query: 116 FAIPHSFSPISLSKPLRSSI-IAKLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPD 292
           F+I +   PI  ++  +S + ++  +  I P+Y  +L+D LKN+K D AR +F +I +P+
Sbjct: 79  FSIWNHVVPILFTRFSKSLVGVSYCTCTIAPSYRDLLSDLLKNQKLDQARFLFAKIPSPE 138

Query: 293 MYLCTKMIAGYAEKYRLNEALELF 364
            YLCT MI GYA   RLN+AL LF
Sbjct: 139 AYLCTLMINGYARSGRLNDALMLF 162


>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/62 (45%), Positives = 43/62 (69%)
 Frame = +2

Query: 179 AKLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEALE 358
           A  +   T +Y S++TD L+N++ D+AR +F+++  PD+YL T MI GYA  YR + AL+
Sbjct: 4   ANYTKFCTFSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQ 63

Query: 359 LF 364
           LF
Sbjct: 64  LF 65


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = +2

Query: 218 VLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEALELF 364
           ++TD L+N++ D+AR +F+++  PD+YL T MI GYA  YR + AL+LF
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLF 49


>gb|EMJ15803.1| hypothetical protein PRUPE_ppa003001mg [Prunus persica]
          Length = 613

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/57 (47%), Positives = 42/57 (73%)
 Frame = +2

Query: 194 LITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEALELF 364
           L TP+Y S+L+D L+N+K ++AR +F  I  P + L T MI GY+ ++RL++AL+LF
Sbjct: 43  LTTPSYKSLLSDHLRNQKLNEARLVFNEIPFPSVSLYTMMITGYSRQHRLDDALKLF 99


>ref|XP_002331875.1| predicted protein [Populus trichocarpa]
           gi|566152696|ref|XP_006369868.1| hypothetical protein
           POPTR_0001s34330g [Populus trichocarpa]
           gi|550348837|gb|ERP66437.1| hypothetical protein
           POPTR_0001s34330g [Populus trichocarpa]
          Length = 675

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/63 (46%), Positives = 44/63 (69%)
 Frame = +2

Query: 176 IAKLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEAL 355
           I + +  IT +Y + L + LKN++ D AR IF++I +P+++L TKMIAGY    RL +AL
Sbjct: 4   ITRYTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDAL 63

Query: 356 ELF 364
           +LF
Sbjct: 64  KLF 66


>gb|EOY27823.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 717

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
 Frame = +2

Query: 77  RSTFQKIESLLRLFAIPHSFSPISLSKPLRSSIIAKLSTLIT----------PTYDSVLT 226
           R+  QK +    LFAI       S+ +P  S+ +  LS   T          P    +L+
Sbjct: 10  RAFLQKTKYSNTLFAI-------SIFRPFSSTNVKILSQSFTTISSNPKSRTPNCKFLLS 62

Query: 227 DFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEALELF 364
           D LKN+  D+AR++  +I  P ++L T MI GYA+ YRL++A+ LF
Sbjct: 63  DHLKNQSLDEAREVLNKIPFPGVHLYTMMIDGYAQSYRLDDAMALF 108


>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
           gi|449533166|ref|XP_004173548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/61 (44%), Positives = 42/61 (68%)
 Frame = +2

Query: 182 KLSTLITPTYDSVLTDFLKNRKFDDARDIFERILNPDMYLCTKMIAGYAEKYRLNEALEL 361
           KLS L TP  + +L+  L+N + D+AR +F ++ +P + L T MI GYA++ RL +AL+L
Sbjct: 44  KLSILTTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKL 103

Query: 362 F 364
           F
Sbjct: 104 F 104