BLASTX nr result

ID: Catharanthus23_contig00032748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00032748
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349508.1| PREDICTED: protein notum homolog [Solanum tu...    60   3e-07
ref|XP_006381192.1| hypothetical protein POPTR_0006s08510g [Popu...    60   4e-07

>ref|XP_006349508.1| PREDICTED: protein notum homolog [Solanum tuberosum]
          Length = 422

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 WRSWSKKEWTIAAAAVTSALIILTF-SHSTTYSSLKYKPLPSESRYTNWVSFTPLRNAQK 33
           WR  +++EWTIA+A++   +  L+F SHS  YS+    P        + + FTPL NAQ+
Sbjct: 12  WRKLTRREWTIASASLAILIFTLSFISHSNRYSNNSMTP-------NDLIPFTPLSNAQQ 64

Query: 32  KAALCLDGSL 3
           K+A CLDGSL
Sbjct: 65  KSAFCLDGSL 74


>ref|XP_006381192.1| hypothetical protein POPTR_0006s08510g [Populus trichocarpa]
           gi|550335786|gb|ERP58989.1| hypothetical protein
           POPTR_0006s08510g [Populus trichocarpa]
          Length = 360

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/81 (40%), Positives = 41/81 (50%)
 Frame = -1

Query: 245 NPLQSSRGFWYQWRSWSKKEWTIAAAAVTSALIILTFSHSTTYSSLKYKPLPSESRYTNW 66
           NP    RG +  WR W KK+W IAA   +  + ILT+        L   P  + S   N 
Sbjct: 5   NPNLRLRGLFLWWRKWGKKDWAIAAVGFSIIVFILTY----LSRPLPLDPAATTSTTDNL 60

Query: 65  VSFTPLRNAQKKAALCLDGSL 3
           V  T L NA+ + ALCLDGSL
Sbjct: 61  VGLTLLHNARDRGALCLDGSL 81


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