BLASTX nr result
ID: Catharanthus23_contig00032706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00032706
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363822.1| PREDICTED: 54S ribosomal protein L12, mitoch... 54 1e-08
ref|XP_004231930.1| PREDICTED: 50S ribosomal protein L12, chloro... 54 1e-08
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like... 50 1e-07
gb|EMJ00834.1| hypothetical protein PRUPE_ppa012349mg [Prunus pe... 50 4e-07
gb|EMJ27164.1| hypothetical protein PRUPE_ppa012547mg [Prunus pe... 50 5e-07
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|5... 48 8e-07
gb|EXB94038.1| 50S ribosomal protein [Morus notabilis] gi|587972... 47 1e-06
gb|EOX91705.1| Ribosomal protein L12/ ATP-dependent Clp protease... 47 1e-06
gb|EPS66704.1| hypothetical protein M569_08072, partial [Genlise... 47 1e-06
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera] 46 2e-06
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro... 46 2e-06
ref|XP_004292448.1| PREDICTED: 50S ribosomal protein L7/L12-like... 47 8e-06
>ref|XP_006363822.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum
tuberosum]
Length = 166
Score = 53.5 bits (127), Expect(2) = 1e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
D+LL L+KLE+HDYSIL RHKMGLNRYG V
Sbjct: 42 DQLLDLNKLEKHDYSILFRHKMGLNRYGPAV 72
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+T+FDVKL KFDAAAK+
Sbjct: 96 KTIFDVKLDKFDAAAKI 112
>ref|XP_004231930.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Solanum
lycopersicum]
Length = 166
Score = 53.5 bits (127), Expect(2) = 1e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
D+LL L+KLE+HDYSIL RHKMGLNRYG V
Sbjct: 42 DQLLDLNKLEKHDYSILFRHKMGLNRYGPAV 72
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+T+FDVKL KFDAAAK+
Sbjct: 96 KTIFDVKLDKFDAAAKI 112
>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
ribosomal protein L7/L12-like [Cucumis sativus]
Length = 168
Score = 49.7 bits (117), Expect(2) = 1e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L K+ERHDY+IL R+KMGLN+YG V
Sbjct: 45 DELLDLTKIERHDYAILFRYKMGLNKYGPAV 75
Score = 32.0 bits (71), Expect(2) = 1e-07
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+TVFD+KL+KFDAAAK+
Sbjct: 98 KTVFDIKLEKFDAAAKI 114
>gb|EMJ00834.1| hypothetical protein PRUPE_ppa012349mg [Prunus persica]
Length = 173
Score = 50.1 bits (118), Expect(2) = 4e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L K+ERHDYSIL R KMGLNRYG V
Sbjct: 51 DELLDLTKIERHDYSILFRLKMGLNRYGPAV 81
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+T FD+K++KFDAAAK+
Sbjct: 103 KTAFDIKIEKFDAAAKI 119
>gb|EMJ27164.1| hypothetical protein PRUPE_ppa012547mg [Prunus persica]
Length = 165
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L K+ERHDYSIL R KMGLNRYG +
Sbjct: 43 DELLNLTKIERHDYSILFRLKMGLNRYGPAI 73
Score = 29.6 bits (65), Expect(2) = 5e-07
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+T FD+K++KFDAAAK+
Sbjct: 95 KTAFDIKIEKFDAAAKI 111
>ref|XP_002328780.1| predicted protein [Populus trichocarpa]
gi|566168224|ref|XP_006385038.1| hypothetical protein
POPTR_0004s23300g [Populus trichocarpa]
gi|550341806|gb|ERP62835.1| hypothetical protein
POPTR_0004s23300g [Populus trichocarpa]
Length = 173
Score = 48.1 bits (113), Expect(2) = 8e-07
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
D LL L K+ERHDY+IL RHKMGL RYG V
Sbjct: 47 DVLLDLTKIERHDYAILFRHKMGLGRYGPAV 77
Score = 30.4 bits (67), Expect(2) = 8e-07
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+T FD+KL+KFDAAAK+
Sbjct: 103 KTAFDIKLEKFDAAAKI 119
>gb|EXB94038.1| 50S ribosomal protein [Morus notabilis] gi|587972019|gb|EXC56880.1|
50S ribosomal protein [Morus notabilis]
Length = 173
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L KLERHDY++L R KMGL+RYG V
Sbjct: 49 DELLDLTKLERHDYAVLFRLKMGLDRYGPAV 79
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 219 QGCRETVFDVKLKKFDAAAKL 281
+ +T FD+KL+KFDAAAK+
Sbjct: 99 KAAEKTAFDIKLEKFDAAAKI 119
>gb|EOX91705.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein [Theobroma cacao]
Length = 172
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L KLER+DYSIL R K+GLNRYG V
Sbjct: 47 DELLDLTKLERYDYSILFRLKLGLNRYGPAV 77
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 219 QGCRETVFDVKLKKFDAAAKL 281
+ +T FD+KL+KFDAAAK+
Sbjct: 98 KAAEKTAFDIKLEKFDAAAKI 118
>gb|EPS66704.1| hypothetical protein M569_08072, partial [Genlisea aurea]
Length = 136
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 67 ELLCLDKLERHDYSILLRHKMGLNRYG 147
EL+ L+++ERHDY ILL+HKMGLNRYG
Sbjct: 15 ELIDLNRIERHDYLILLQHKMGLNRYG 41
Score = 30.4 bits (67), Expect(2) = 1e-06
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 219 QGCRETVFDVKLKKFDAAAKL 281
Q +TVFDVKL +FDAA KL
Sbjct: 62 QAKEKTVFDVKLDRFDAAVKL 82
>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
Length = 615
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L KLER+DYSIL R K+GLN+YG V
Sbjct: 490 DELLDLTKLERYDYSILFRLKLGLNKYGPAV 520
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 219 QGCRETVFDVKLKKFDAAAKL 281
+ +T FD+KL+KFDAAAK+
Sbjct: 541 KAAEKTAFDIKLEKFDAAAKI 561
>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
vinifera]
Length = 165
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
DELL L KLER+DYSIL R K+GLN+YG V
Sbjct: 40 DELLDLTKLERYDYSILFRLKLGLNKYGPAV 70
Score = 30.8 bits (68), Expect(2) = 2e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 219 QGCRETVFDVKLKKFDAAAKL 281
+ +T FD+KL+KFDAAAK+
Sbjct: 91 KAAEKTAFDIKLEKFDAAAKI 111
>ref|XP_004292448.1| PREDICTED: 50S ribosomal protein L7/L12-like [Fragaria vesca subsp.
vesca]
Length = 165
Score = 46.6 bits (109), Expect(2) = 8e-06
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1
Query: 64 DELLCLDKLERHDYSILLRHKMGLNRYGAVV 156
+ELL L K+ERHDYSIL R K+GLNRYG +
Sbjct: 43 EELLELTKIERHDYSILFRLKLGLNRYGPAI 73
Score = 28.5 bits (62), Expect(2) = 8e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 231 ETVFDVKLKKFDAAAKL 281
+ FD+KL+KFDAAAK+
Sbjct: 95 KVAFDIKLEKFDAAAKI 111