BLASTX nr result

ID: Catharanthus23_contig00032692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00032692
         (227 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    88   1e-15
gb|EMJ23893.1| hypothetical protein PRUPE_ppa006365mg [Prunus pe...    88   1e-15
ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    86   4e-15
ref|XP_006466567.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    86   4e-15
ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citr...    86   4e-15
ref|XP_006426309.1| hypothetical protein CICLE_v10027093mg, part...    86   4e-15
ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    84   2e-14
gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis ...    84   2e-14
ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Popu...    84   2e-14
gb|EOY15349.1| RING/U-box superfamily protein, putative [Theobro...    84   2e-14
ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Caps...    84   2e-14
ref|XP_004301345.1| PREDICTED: RING-H2 finger protein ATL11-like...    84   2e-14
ref|XP_002328426.1| predicted protein [Populus trichocarpa]            84   2e-14
ref|XP_006408102.1| hypothetical protein EUTSA_v10020868mg [Eutr...    84   3e-14
ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arab...    84   3e-14
ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis t...    83   3e-14
ref|XP_006394969.1| hypothetical protein EUTSA_v10004360mg [Eutr...    83   3e-14
gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabid...    83   3e-14
gb|AAD33584.1|AF132016_1 RING-H2 zinc finger protein ATL6 [Arabi...    83   3e-14
gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein A...    83   3e-14

>ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Fragaria vesca
           subsp. vesca]
          Length = 377

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLDP +I++FPMF+YSDVK LK+GKGALECAVCL+EFED ETLRLLPK
Sbjct: 93  RGLDPAVIEKFPMFVYSDVKDLKIGKGALECAVCLSEFEDYETLRLLPK 141


>gb|EMJ23893.1| hypothetical protein PRUPE_ppa006365mg [Prunus persica]
          Length = 415

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -2

Query: 154 VTRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           + RGLDP +I+ FP FLYSDVKGL+LGK +LECAVCLNEF+DDETLRL+PK
Sbjct: 86  MARGLDPAVIETFPAFLYSDVKGLQLGKDSLECAVCLNEFQDDETLRLIPK 136


>ref|XP_006471949.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
          Length = 443

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +ID FP F+YSDVK LK+GKGALECAVCLNEFEDDETLRL+PK
Sbjct: 164 RGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPK 212


>ref|XP_006466567.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Citrus sinensis]
          Length = 291

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLDP +I+ FP+F+YS VK LK+GKGALECAVCL+EFEDDETLRLLPK
Sbjct: 124 RGLDPSVIESFPIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPK 172


>ref|XP_006433262.1| hypothetical protein CICLE_v10001478mg [Citrus clementina]
           gi|557535384|gb|ESR46502.1| hypothetical protein
           CICLE_v10001478mg [Citrus clementina]
          Length = 384

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +ID FP F+YSDVK LK+GKGALECAVCLNEFEDDETLRL+PK
Sbjct: 105 RGLDREVIDTFPTFVYSDVKTLKVGKGALECAVCLNEFEDDETLRLIPK 153


>ref|XP_006426309.1| hypothetical protein CICLE_v10027093mg, partial [Citrus clementina]
           gi|557528299|gb|ESR39549.1| hypothetical protein
           CICLE_v10027093mg, partial [Citrus clementina]
          Length = 548

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLDP +I+ FP+F+YS VK LK+GKGALECAVCL+EFEDDETLRLLPK
Sbjct: 165 RGLDPSVIESFPIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPK 213


>ref|XP_004139190.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Cucumis sativus]
           gi|449518671|ref|XP_004166360.1| PREDICTED: E3
           ubiquitin-protein ligase ATL6-like [Cucumis sativus]
          Length = 379

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = -2

Query: 151 TRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           TRGLDP +I+ FP  +YSDVK  K+GK ALECAVCLNEFEDDETLRL+PK
Sbjct: 93  TRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPK 142


>gb|AAO45753.1| RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo]
          Length = 379

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = -2

Query: 151 TRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           TRGLDP +I+ FP  +YSDVK  K+GK ALECAVCLNEFEDDETLRL+PK
Sbjct: 93  TRGLDPAVIETFPTLIYSDVKEHKIGKSALECAVCLNEFEDDETLRLIPK 142


>ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Populus trichocarpa]
           gi|550337989|gb|ERP60422.1| hypothetical protein
           POPTR_0005s03900g [Populus trichocarpa]
          Length = 385

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = -2

Query: 151 TRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLP 5
           +RGLDP +I+ FP  +YS VKGLK+GKGALECAVCLNEFE+DETLRL+P
Sbjct: 98  SRGLDPAVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIP 146


>gb|EOY15349.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 420

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -2

Query: 154 VTRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           +TRGLD  +I+ FP FLYS VKGLK+G   LECAVCLNEFEDDETLRL+PK
Sbjct: 114 LTRGLDASVIESFPTFLYSTVKGLKIGNDTLECAVCLNEFEDDETLRLIPK 164


>ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Capsella rubella]
           gi|482566528|gb|EOA30717.1| hypothetical protein
           CARUB_v10013853mg [Capsella rubella]
          Length = 405

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 104 RGLDAAVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 152


>ref|XP_004301345.1| PREDICTED: RING-H2 finger protein ATL11-like [Fragaria vesca subsp.
           vesca]
          Length = 364

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -2

Query: 154 VTRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           + RGLDP +I+ FP FL+SDVKGL LGK +L+CAVCLN+F+DDETLRL+PK
Sbjct: 42  MNRGLDPAVIESFPAFLFSDVKGLHLGKDSLQCAVCLNDFQDDETLRLIPK 92


>ref|XP_002328426.1| predicted protein [Populus trichocarpa]
          Length = 374

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = -2

Query: 151 TRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLP 5
           +RGLDP +I+ FP  +YS VKGLK+GKGALECAVCLNEFE+DETLRL+P
Sbjct: 87  SRGLDPAVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEEDETLRLIP 135


>ref|XP_006408102.1| hypothetical protein EUTSA_v10020868mg [Eutrema salsugineum]
           gi|557109248|gb|ESQ49555.1| hypothetical protein
           EUTSA_v10020868mg [Eutrema salsugineum]
          Length = 397

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 102 RGLDASVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 150


>ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arabidopsis lyrata subsp.
           lyrata] gi|297328242|gb|EFH58661.1| hypothetical protein
           ARALYDRAFT_477807 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 98  RGLDASVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 146


>ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
           gi|68565231|sp|Q8RXX9.2|ATL6_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL6; AltName: Full=RING-H2
           finger protein ATL6; Flags: Precursor
           gi|70905101|gb|AAZ14076.1| At3g05200 [Arabidopsis
           thaliana] gi|332640683|gb|AEE74204.1| E3
           ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
          Length = 398

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 98  RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 146


>ref|XP_006394969.1| hypothetical protein EUTSA_v10004360mg [Eutrema salsugineum]
           gi|557091608|gb|ESQ32255.1| hypothetical protein
           EUTSA_v10004360mg [Eutrema salsugineum]
          Length = 396

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/51 (74%), Positives = 44/51 (86%)
 Frame = -2

Query: 154 VTRGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           V RGLD  +I+ FP F+YS+VK  K+GKGALECA+CLNEFEDDETLRLLPK
Sbjct: 113 VARGLDASMIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPK 163


>gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 388

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 98  RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 146


>gb|AAD33584.1|AF132016_1 RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 398

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 98  RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 146


>gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 392

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = -2

Query: 148 RGLDPIIIDEFPMFLYSDVKGLKLGKGALECAVCLNEFEDDETLRLLPK 2
           RGLD  +++ FP FLYSDVK  KLGKG LECA+CLNEFEDDETLRLLPK
Sbjct: 92  RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPK 140


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